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User-friendly interface utilities for MCMC models via Just Another Gibbs Sampler (JAGS), facilitating the use of parallel (or distributed) processors for multiple chains, automated control of convergence and sample length diagnostics, and evaluation of the performance of a model using drop-k validation or against simulated data. Template model specifications can be generated using a standard lme4-style formula interface to assist users less familiar with the BUGS syntax. A JAGS extension module provides additional distributions including the Pareto family of distributions, the DuMouchel prior and the half-Cauchy prior.
| Version: | 2.2.2-4 |
| Depends: | R (≥ 2.14.0) |
| Imports: | parallel, lattice (≥ 0.20-10), coda (≥ 0.17-1), stats, utils |
| Suggests: | rjags (≥ 4-7), modeest, testthat (≥ 3.0.0), knitr, markdown, spelling |
| Published: | 2024-03-10 |
| DOI: | 10.32614/CRAN.package.runjags |
| Author: | Matthew Denwood [aut, cre], Martyn Plummer [cph] (Copyright holder of the code in src/distributions/DPar1.*, configure.ac, R/rjags_functions.R, and original copyright holder of some modified code where indicated) |
| Maintainer: | Matthew Denwood <md at sund.ku.dk> |
| BugReports: | https://github.com/ku-awdc/runjags/issues |
| License: | GPL-2 |
| URL: | https://github.com/ku-awdc/runjags |
| NeedsCompilation: | yes |
| SystemRequirements: | JAGS >= 4.3.0 (https://mcmc-jags.sourceforge.io/) |
| Language: | en-GB |
| Citation: | runjags citation info |
| Materials: | README ChangeLog INSTALL |
| In views: | Bayesian |
| CRAN checks: | runjags results |
| Reference manual: | runjags.pdf |
| Vignettes: |
A quick-start guide to running models in JAGS Using the runjags package |
| Package source: | runjags_2.2.2-4.tar.gz |
| Windows binaries: | r-devel: runjags_2.2.2-4.zip, r-release: runjags_2.2.2-4.zip, r-oldrel: runjags_2.2.2-4.zip |
| macOS binaries: | r-release (arm64): runjags_2.2.2-4.tgz, r-oldrel (arm64): runjags_2.2.2-4.tgz, r-release (x86_64): runjags_2.2.2-4.tgz, r-oldrel (x86_64): runjags_2.2.2-4.tgz |
| Old sources: | runjags archive |
| Reverse imports: | BANOVA, bayescount, BayesPostEst, BayLum, bfw, ern, IsotopeR, mcmsupply, MPTmultiverse, neojags, ordinalbayes, pivmet, RcmdrPlugin.RMTCJags, RoBMA, RoBSA, swfscMisc, TreeBUGS |
| Reverse suggests: | BayesTools, blavaan, bridgesampling, icensBKL, metamisc, mvgam, runMCMCbtadjust, surveillance, surveyvoi, tidybayes |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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