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ern: Effective Reproduction Number Estimation

Estimate the effective reproduction number from wastewater and clinical data sources.

Version: 2.0.0
Depends: R (≥ 4.1.0)
Imports: assertthat, coda, dplyr, EpiEstim, ggplot2, lubridate, patchwork, rjags, runjags, stats, stringr, tibble, tidyr, zoo
Suggests: knitr, rmarkdown, bookdown, purrr, testthat (≥ 3.0.0)
Published: 2024-04-22
Author: David Champredon ORCID iD [aut, cre], Warsame Yusuf ORCID iD [aut], Irena Papst ORCID iD [aut]
Maintainer: David Champredon <david.champredon at canada.ca>
License: MIT + file LICENSE
NeedsCompilation: no
Citation: ern citation info
Materials: README
CRAN checks: ern results

Documentation:

Reference manual: ern.pdf
Vignettes: Estimating the effective reproductive number using 'ern'

Downloads:

Package source: ern_2.0.0.tar.gz
Windows binaries: r-devel: ern_2.0.0.zip, r-release: ern_2.0.0.zip, r-oldrel: ern_2.0.0.zip
macOS binaries: r-release (arm64): ern_2.0.0.tgz, r-oldrel (arm64): ern_2.0.0.tgz, r-release (x86_64): ern_2.0.0.tgz, r-oldrel (x86_64): ern_2.0.0.tgz
Old sources: ern archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=ern to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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