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OmopSketch: Characterise Tables of an OMOP Common Data Model Instance

Summarises key information in data mapped to the Observational Medical Outcomes Partnership (OMOP) common data model. Assess suitability to perform specific epidemiological studies and explore the different domains to obtain feasibility counts and trends.

Version: 0.1.2
Depends: R (≥ 2.10)
Imports: CDMConnector (≥ 1.3.0), cli, clock, gt, flextable, CohortCharacteristics (≥ 0.3.0), CohortConstructor (≥ 0.3.1), dplyr, ggplot2, omock (≥ 0.3.0), omopgenerics (≥ 0.3.1), PatientProfiles (≥ 1.2.0), purrr, rlang, stringr, tibble, tidyr, visOmopResults (≥ 0.4.0), duckdb
Suggests: CodelistGenerator, DBI, here, knitr, odbc, remotes, rmarkdown, RPostgres, testthat (≥ 3.0.0), withr
Published: 2024-11-12
DOI: 10.32614/CRAN.package.OmopSketch
Author: Marta Alcalde-Herraiz ORCID iD [aut, cre], Kim Lopez-Guell ORCID iD [aut], Elin Rowlands ORCID iD [aut], Edward Burn ORCID iD [aut], Martí Català ORCID iD [aut]
Maintainer: Marta Alcalde-Herraiz <marta.alcaldeherraiz at ndorms.ox.ac.uk>
BugReports: https://github.com/OHDSI/OmopSketch/issues
License: Apache License (≥ 2)
URL: https://OHDSI.github.io/OmopSketch/
NeedsCompilation: no
Materials: README
CRAN checks: OmopSketch results

Documentation:

Reference manual: OmopSketch.pdf
Vignettes: A-summarise_clinical_tables_records (source, R code)
B-summarise_concept_counts (source, R code)

Downloads:

Package source: OmopSketch_0.1.2.tar.gz
Windows binaries: r-devel: OmopSketch_0.1.2.zip, r-release: OmopSketch_0.1.2.zip, r-oldrel: OmopSketch_0.1.2.zip
macOS binaries: r-release (arm64): OmopSketch_0.1.2.tgz, r-oldrel (arm64): OmopSketch_0.1.2.tgz, r-release (x86_64): OmopSketch_0.1.2.tgz, r-oldrel (x86_64): OmopSketch_0.1.2.tgz
Old sources: OmopSketch archive

Reverse dependencies:

Reverse imports: PhenotypeR
Reverse suggests: OmopViewer

Linking:

Please use the canonical form https://CRAN.R-project.org/package=OmopSketch to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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