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Provides tools for working with observational health data in the Observational Medical Outcomes Partnership (OMOP) Common Data Model format with a pipe friendly syntax. Common data model database table references are stored in a single compound object along with metadata.
Version: | 1.5.0 |
Depends: | R (≥ 4.0) |
Imports: | dplyr, dbplyr (≥ 2.5.0), DBI (≥ 0.3.0), checkmate, cli, purrr, rlang, tidyselect, readr, glue, waldo, methods, withr, lifecycle, jsonlite, stringr, stringi, fs, generics, tidyr, omopgenerics (≥ 0.1.2) |
Suggests: | SqlRender, CirceR, rJava, covr, knitr, rmarkdown, duckdb, RSQLite, RPostgres, odbc, ggplot2, bigrquery, DatabaseConnector, lubridate, clock, tibble, testthat (≥ 3.0.0), pool, snakecase, palmerpenguins, tictoc |
Enhances: | arrow |
Published: | 2024-07-16 |
DOI: | 10.32614/CRAN.package.CDMConnector |
Author: | Adam Black |
Maintainer: | Adam Black <black at ohdsi.org> |
BugReports: | https://github.com/darwin-eu/CDMConnector/issues |
License: | Apache License (≥ 2) |
URL: | https://darwin-eu.github.io/CDMConnector/, https://github.com/darwin-eu/CDMConnector |
NeedsCompilation: | no |
Materials: | README NEWS |
CRAN checks: | CDMConnector results |
Reference manual: | CDMConnector.pdf |
Vignettes: |
Getting Started Working with cohorts CDMConnector and dbplyr DBI connection examples CDM reference backends Using CDM attributes |
Package source: | CDMConnector_1.5.0.tar.gz |
Windows binaries: | r-devel: CDMConnector_1.5.0.zip, r-release: CDMConnector_1.5.0.zip, r-oldrel: CDMConnector_1.5.0.zip |
macOS binaries: | r-release (arm64): CDMConnector_1.5.0.tgz, r-oldrel (arm64): CDMConnector_1.4.0.tgz, r-release (x86_64): CDMConnector_1.5.0.tgz, r-oldrel (x86_64): CDMConnector_1.4.0.tgz |
Old sources: | CDMConnector archive |
Reverse imports: | CohortCharacteristics, CohortConstructor, CohortSurvival, CohortSymmetry, DrugExposureDiagnostics, DrugUtilisation, IncidencePrevalence, PatientProfiles, TestGenerator |
Reverse suggests: | CodelistGenerator, TreatmentPatterns |
Please use the canonical form https://CRAN.R-project.org/package=CDMConnector to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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