The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.

CohortConstructor: Build and Manipulate Study Cohorts Using a Common Data Model

Create and manipulate study cohorts in data mapped to the Observational Medical Outcomes Partnership Common Data Model.

Version: 0.3.3
Depends: R (≥ 4.1)
Imports: CDMConnector (≥ 1.3.1), checkmate, cli, clock, dbplyr (≥ 2.5.0), dplyr, glue, magrittr, omopgenerics (≥ 0.4.0), PatientProfiles (≥ 1.2.0), purrr, rlang, tidyr, utils
Suggests: DBI, CodelistGenerator, DrugUtilisation, duckdb, knitr, rmarkdown, testthat (≥ 3.0.0), tibble, stringr, IncidencePrevalence, omock (≥ 0.2.0), covr, RPostgres, odbc, CohortCharacteristics, ggplot2, DiagrammeR, visOmopResults, gt, scales, here, ggpubr
Published: 2024-11-26
DOI: 10.32614/CRAN.package.CohortConstructor
Author: Edward Burn ORCID iD [aut, cre], Marti Catala ORCID iD [aut], Nuria Mercade-Besora ORCID iD [aut], Marta Alcalde-Herraiz ORCID iD [aut], Mike Du ORCID iD [aut], Yuchen Guo ORCID iD [aut], Xihang Chen ORCID iD [aut], Kim Lopez-Guell ORCID iD [aut], Elin Rowlands ORCID iD [aut]
Maintainer: Edward Burn <edward.burn at ndorms.ox.ac.uk>
License: Apache License (≥ 2)
URL: https://ohdsi.github.io/CohortConstructor/, https://github.com/OHDSI/CohortConstructor
NeedsCompilation: no
Materials: README
CRAN checks: CohortConstructor results

Documentation:

Reference manual: CohortConstructor.pdf
Vignettes: a00_introduction (source, R code)
a01_building_base_cohorts (source, R code)
a02_cohort_table_requirements (source, R code)
a03_require_demographics (source, R code)
a04_require_intersections (source, R code)
a04_update_cohort_start_end (source)
a05_concatanate_cohorts (source, R code)
a07_filter_cohorts (source, R code)
a07_split_cohorts (source, R code)
a08_combine_cohorts (source, R code)
Generate a matched age and sex cohort (source, R code)
a11_benchmark (source, R code)

Downloads:

Package source: CohortConstructor_0.3.3.tar.gz
Windows binaries: r-devel: CohortConstructor_0.3.3.zip, r-release: CohortConstructor_0.3.3.zip, r-oldrel: CohortConstructor_0.3.3.zip
macOS binaries: r-release (arm64): CohortConstructor_0.3.3.tgz, r-oldrel (arm64): CohortConstructor_0.3.3.tgz, r-release (x86_64): CohortConstructor_0.3.3.tgz, r-oldrel (x86_64): CohortConstructor_0.3.3.tgz
Old sources: CohortConstructor archive

Reverse dependencies:

Reverse imports: OmopSketch, PhenotypeR
Reverse suggests: CohortCharacteristics, OmopViewer

Linking:

Please use the canonical form https://CRAN.R-project.org/package=CohortConstructor to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.