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EBASE: Estuarine Bayesian Single-Station Estimation Method for Ecosystem Metabolism

Estimate ecosystem metabolism in a Bayesian framework for individual water quality monitoring stations with continuous dissolved oxygen time series. A mass balance equation is used that provides estimates of parameters for gross primary production, respiration, and gas exchange. Methods adapted from Grace et al. (2015) <doi:10.1002/lom3.10011> and Wanninkhof (2014) <doi:10.4319/lom.2014.12.351>. Details in Beck et al. (2024) <doi:10.1002/lom3.10620>.

Version: 1.1.0
Depends: R (≥ 3.5)
Imports: doParallel, dplyr, foreach, ggplot2 (≥ 3.4.0), lubridate, R2jags (≥ 0.6.1), rjags (≥ 4.10), tidyr, truncnorm, zoo
Suggests: testthat (≥ 3.0.0), knitr, rmarkdown, covr
Published: 2024-09-25
DOI: 10.32614/CRAN.package.EBASE
Author: Marcus Beck ORCID iD [aut, cre], Maria Herrmann [aut], Jill Arriola ORCID iD [aut], Raymond Najjar ORCID iD [aut]
Maintainer: Marcus Beck <mbeck at tbep.org>
BugReports: https://github.com/fawda123/EBASE/issues
License: CC0
URL: https://fawda123.github.io/EBASE/, https://github.com/fawda123/EBASE/
NeedsCompilation: no
SystemRequirements: JAGS 4.x.y (https://mcmc-jags.sourceforge.net)
Materials: README NEWS
CRAN checks: EBASE results

Documentation:

Reference manual: EBASE.pdf
Vignettes: EBASE overview (source, R code)

Downloads:

Package source: EBASE_1.1.0.tar.gz
Windows binaries: r-devel: EBASE_1.1.0.zip, r-release: EBASE_1.1.0.zip, r-oldrel: EBASE_1.1.0.zip
macOS binaries: r-release (arm64): EBASE_1.1.0.tgz, r-oldrel (arm64): EBASE_1.1.0.tgz, r-release (x86_64): EBASE_1.1.0.tgz, r-oldrel (x86_64): EBASE_1.1.0.tgz
Old sources: EBASE archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=EBASE to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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