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EBASE

R-CMD-check EBASE status badge pkgdown Codecov test coverage CRAN status

R package for Estuarine BAyesian Single-station Estimation (EBASE) method for ecosystem metabolism.

Installation

Install the package as follows:

# Install EBASE in R:
install.packages('EBASE', repos = c('https://fawda123.r-universe.dev', 'https://cloud.r-project.org'))

The JAGS software must also be installed to use this package. Follow the instructions in the link to download and install the version appropriate for your operating system.

Minimal example

library(dplyr)
library(lubridate)
library(doParallel)

# get four days of data
dat <- exdat %>%
  filter(month(DateTimeStamp) == 6 & day(DateTimeStamp) %in% 1:4)

##
# run ebase with defaults

# setup parallel backend
cl <- makeCluster(2)
registerDoParallel(cl)

res <- ebase(dat, interval = 900, Z = 1.85)

stopCluster(cl)

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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