Last updated on 2024-08-16 21:49:28 CEST.
Package | ERROR | WARN | NOTE | OK |
---|---|---|---|---|
bigrquery | 5 | 8 | ||
dbplyr | 1 | 3 | 9 | |
diffviewer | 13 | |||
downlit | 13 | |||
dplyr | 5 | 8 | ||
dtplyr | 3 | 10 | ||
evaluate | 13 | |||
ggvis | 13 | |||
haven | 13 | |||
httr | 13 | |||
httr2 | 2 | 11 | ||
isoband | 13 | |||
modelr | 1 | 12 | ||
multidplyr | 13 | |||
odbc | 4 | 3 | 6 | |
pkgdown | 4 | 1 | 8 | |
pool | 13 | |||
roxygen2 | 5 | 8 | ||
rvest | 13 | |||
S7 | 1 | 5 | 7 | |
stringr | 3 | 10 | ||
testthat | 9 | 4 | ||
tidyr | 1 | 5 | 7 | |
waldo | 13 | |||
xml2 | 13 |
Current CRAN status: NOTE: 5, OK: 8
Version: 1.5.1
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
DBI.Rd: DBIObject-class, DBIDriver-class, DBIConnection-class,
DBIResult-class
bigquery.Rd: DBIDriver-class, DBIConnection-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 1.5.1
Check: compiled code
Result: NOTE
File ‘bigrquery/libs/bigrquery.so’:
Found non-API calls to R: ‘SETLENGTH’, ‘SET_GROWABLE_BIT’,
‘SET_TRUELENGTH’
Compiled code should not call non-API entry points in R.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.5.1
Check: compiled code
Result: NOTE
File 'bigrquery/libs/x64/bigrquery.dll':
Found non-API calls to R: 'SETLENGTH', 'SET_GROWABLE_BIT',
'SET_TRUELENGTH'
Compiled code should not call non-API entry points in R.
See 'Writing portable packages' in the 'Writing R Extensions' manual,
and section 'Moving into C API compliance' for issues with the use of
non-API entry points.
Flavor: r-devel-windows-x86_64
Current CRAN status: ERROR: 1, NOTE: 3, OK: 9
Version: 2.5.0
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
arrange.tbl_lazy.Rd: arrange, show_query
backend-hana.Rd: copy_to
collapse.tbl_sql.Rd: collapse, compute, collect
complete.tbl_lazy.Rd: show_query
copy_inline.Rd: copy_to
copy_to.src_sql.Rd: copy_to, show_query
count.tbl_lazy.Rd: count, tally
db-sql.Rd: copy_to
dbplyr-slice.Rd: slice_min, slice_max, slice_sample
distinct.tbl_lazy.Rd: distinct, show_query
expand.tbl_lazy.Rd: show_query
filter.tbl_lazy.Rd: show_query
get_returned_rows.Rd: rows_insert, rows_append, rows_update,
rows_upsert, rows_delete
group_by.tbl_lazy.Rd: group_by
head.tbl_lazy.Rd: show_query
join.tbl_sql.Rd: join, show_query
memdb_frame.Rd: !!, !!!, .data, .env
mutate.tbl_lazy.Rd: mutate, transmute, show_query
nycflights13.Rd: src_postgres
pivot_wider.tbl_lazy.Rd: expand
pull.tbl_sql.Rd: pull
replace_na.tbl_lazy.Rd: show_query
rows-db.Rd: rows_insert, rows_append, rows_update, rows_patch,
rows_upsert, rows_delete, tbl, compute
select.tbl_lazy.Rd: select, rename, relocate
summarise.tbl_lazy.Rd: summarise, show_query
tbl.src_dbi.Rd: compute, collect, show_query, explain, do
win_over.Rd: group_by, arrange
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 2.5.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [0s/0s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
Error in library(testthat) : there is no package called 'testthat'
Execution halted
Flavor: r-release-macos-x86_64
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: NOTE: 5, OK: 8
Version: 1.1.4
Check: compiled code
Result: NOTE
File ‘dplyr/libs/dplyr.so’:
Found non-API calls to R: ‘LEVELS’, ‘PRVALUE’,
‘R_shallow_duplicate_attr’, ‘SET_PRCODE’, ‘SET_PRENV’,
‘SET_PRVALUE’
Compiled code should not call non-API entry points in R.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.1.4
Check: data for non-ASCII characters
Result: NOTE
Note: found 4 marked UTF-8 strings
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.1.4
Check: compiled code
Result: NOTE
File 'dplyr/libs/x64/dplyr.dll':
Found non-API calls to R: 'LEVELS', 'PRVALUE',
'R_shallow_duplicate_attr', 'SET_PRCODE', 'SET_PRENV',
'SET_PRVALUE'
Compiled code should not call non-API entry points in R.
See 'Writing portable packages' in the 'Writing R Extensions' manual,
and section 'Moving into C API compliance' for issues with the use of
non-API entry points.
Flavor: r-devel-windows-x86_64
Current CRAN status: NOTE: 3, OK: 10
Version: 1.3.1
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
arrange.dtplyr_step.Rd: arrange
count.dtplyr_step.Rd: count
distinct.dtplyr_step.Rd: distinct
filter.dtplyr_step.Rd: arrange
group_by.dtplyr_step.Rd: group_by, ungroup
group_modify.dtplyr_step.Rd: group_map, group_modify
intersect.dtplyr_step.Rd: union_all
lazy_dt.Rd: collect, pull, select
left_join.dtplyr_step.Rd: left_join, right_join, inner_join,
full_join, anti_join, semi_join
mutate.dtplyr_step.Rd: mutate
relocate.dtplyr_step.Rd: relocate
rename.dtplyr_step.Rd: rename, rename_with
select.dtplyr_step.Rd: select
slice.dtplyr_step.Rd: slice
summarise.dtplyr_step.Rd: summarise
transmute.dtplyr_step.Rd: transmute
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: NOTE: 13
Version: 2.5.4
Check: for GNU extensions in Makefiles
Result: NOTE
GNU make is a SystemRequirements.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 2.5.4
Check: compiled code
Result: NOTE
File ‘haven/libs/haven.so’:
Found non-API calls to R: ‘SETLENGTH’, ‘SET_GROWABLE_BIT’,
‘SET_TRUELENGTH’
Compiled code should not call non-API entry points in R.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 2.5.4
Check: Rd cross-references
Result: NOTE
Undeclared package ‘dplyr’ in Rd xrefs
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 2.5.4
Check: compiled code
Result: NOTE
File 'haven/libs/x64/haven.dll':
Found non-API calls to R: 'SETLENGTH', 'SET_GROWABLE_BIT',
'SET_TRUELENGTH'
Compiled code should not call non-API entry points in R.
See 'Writing portable packages' in the 'Writing R Extensions' manual,
and section 'Moving into C API compliance' for issues with the use of
non-API entry points.
Flavor: r-devel-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: ERROR: 2, OK: 11
Version: 1.0.2
Check: running R code from vignettes
Result: ERROR
Errors in running code in vignettes:
when running code in ‘httr2.Rmd’
...
.. ..$ type : chr "office"
.. ..$ number: chr "646 555-4567"
$ children : list()
$ spouse : NULL
> req_perform(req_url_path(request(example_url()), "/status/404"))
When sourcing ‘httr2.R’:
Error: HTTP 404 Not Found.
Execution halted
‘httr2.Rmd’ using ‘UTF-8’... failed
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Current CRAN status: NOTE: 13
Version: 0.2.7
Check: C++ specification
Result: NOTE
Specified C++11: please drop specification unless essential
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.2.7
Check: compiled code
Result: NOTE
File ‘isoband/libs/isoband.so’:
Found non-API call to R: ‘SETLENGTH’
Compiled code should not call non-API entry points in R.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.2.7
Check: compiled code
Result: NOTE
File 'isoband/libs/x64/isoband.dll':
Found non-API call to R: 'SETLENGTH'
Compiled code should not call non-API entry points in R.
See 'Writing portable packages' in the 'Writing R Extensions' manual,
and section 'Moving into C API compliance' for issues with the use of
non-API entry points.
Flavor: r-devel-windows-x86_64
Current CRAN status: NOTE: 1, OK: 12
Version: 0.1.11
Check: Rd cross-references
Result: NOTE
Undeclared packages ‘lme4’, ‘rstanarm’, ‘dplyr’ in Rd xrefs
Flavor: r-devel-linux-x86_64-fedora-clang
Current CRAN status: OK: 13
Current CRAN status: ERROR: 4, NOTE: 3, OK: 6
Version: 1.5.0
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
DBI-methods.Rd: DBIConnection-class
OdbcConnection.Rd: DBIObject-class, DBIDriver-class,
DBIConnection-class, DBIResult-class, dbBind
OdbcDriver.Rd: DBIDriver-class, DBIConnection-class
OdbcResult.Rd: DBIResult-class, DBIObject-class, DBIDriver-class,
DBIConnection-class
databricks.Rd: DBIDriver-class, DBIConnection-class
dbConnect-OdbcDriver-method.Rd: dbListTables, dbSendQuery,
dbColumnInfo, dbFetch
dbListTables-OdbcConnection-method.Rd: DBIConnection-class
driver-Snowflake.Rd: DBIConnection-class
odbcConnectionColumns.Rd: dbListFields, dbWriteTable
odbcSetTransactionIsolationLevel.Rd: DBIConnection-class
snowflake.Rd: DBIDriver-class, DBIConnection-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 1.5.0
Check: installed package size
Result: NOTE
installed size is 11.4Mb
sub-directories of 1Mb or more:
libs 10.6Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 1.5.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [3s/4s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
'test-utils.R:87:3', 'test-utils.R:94:3', 'test-utils.R:103:3',
'test-utils.R:112:3', 'test-utils.R:135:3', 'test-utils.R:150:3'
• Secret ODBC_PWD_SNOWFLAKE not available. (2): 'test-driver-snowflake.R:4:5',
'test-driver-snowflake.R:154:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-utils.R:144:3'): locate_install_unixodbc() returns reasonable values ──
file.exists(res[1]) is not TRUE
`actual`: FALSE
`expected`: TRUE
[ FAIL 1 | WARN 0 | SKIP 72 | PASS 77 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-arm64
Version: 1.5.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [5s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
'test-utils.R:87:3', 'test-utils.R:94:3', 'test-utils.R:103:3',
'test-utils.R:112:3', 'test-utils.R:135:3', 'test-utils.R:150:3'
• Secret ODBC_PWD_SNOWFLAKE not available. (2): 'test-driver-snowflake.R:4:5',
'test-driver-snowflake.R:154:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-utils.R:144:3'): locate_install_unixodbc() returns reasonable values ──
file.exists(res[1]) is not TRUE
`actual`: FALSE
`expected`: TRUE
[ FAIL 1 | WARN 0 | SKIP 72 | PASS 77 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.5.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [3s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
'test-utils.R:87:3', 'test-utils.R:94:3', 'test-utils.R:103:3',
'test-utils.R:112:3', 'test-utils.R:135:3', 'test-utils.R:150:3'
• Secret ODBC_PWD_SNOWFLAKE not available. (2): 'test-driver-snowflake.R:4:5',
'test-driver-snowflake.R:154:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-utils.R:144:3'): locate_install_unixodbc() returns reasonable values ──
file.exists(res[1]) is not TRUE
`actual`: FALSE
`expected`: TRUE
[ FAIL 1 | WARN 0 | SKIP 72 | PASS 77 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-arm64
Version: 1.5.0
Check: running R code from vignettes
Result: ERROR
Errors in running code in vignettes:
when running code in ‘benchmarks.Rmd’
...
> options(connectionObserver = NULL)
> odbc <- dbConnect(odbc::odbc(), dsn = "MicrosoftSQLServer",
+ uid = "SA", pwd = "BoopBop123!")
When sourcing ‘benchmarks.R’:
Error: ! ODBC failed with error 00000 from [unixODBC][Driver Manager].
✖ Data source name not found and no default driver specified
ℹ From 'nanodbc/nanodbc.cpp:1150'.
Execution halted
‘benchmarks.Rmd’ using ‘UTF-8’... failed
‘develop.Rmd’ using ‘UTF-8’... [0s/0s] OK
‘setup.Rmd’ using ‘UTF-8’... [0s/0s] OK
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 1.5.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [5s/6s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
'test-utils.R:87:3', 'test-utils.R:94:3', 'test-utils.R:103:3',
'test-utils.R:112:3', 'test-utils.R:135:3', 'test-utils.R:150:3'
• Secret ODBC_PWD_SNOWFLAKE not available. (2): 'test-driver-snowflake.R:4:5',
'test-driver-snowflake.R:154:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-utils.R:144:3'): locate_install_unixodbc() returns reasonable values ──
file.exists(res[1]) is not TRUE
`actual`: FALSE
`expected`: TRUE
[ FAIL 1 | WARN 0 | SKIP 72 | PASS 77 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64
Current CRAN status: ERROR: 4, NOTE: 1, OK: 8
Version: 2.1.0
Check: Rd cross-references
Result: NOTE
Undeclared package ‘usethis’ in Rd xrefs
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 2.1.0
Check: tests
Result: ERROR
Running 'testthat.R' [84s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(pkgdown)
>
> test_check("pkgdown")
Starting 2 test processes
[ FAIL 1 | WARN 0 | SKIP 135 | PASS 679 ]
══ Skipped tests (135) ═════════════════════════════════════════════════════════
• On CRAN (125): 'test-build-reference.R:4:3', 'test-build-reference.R:105:3',
'test-build-articles.R:14:3', 'test-build-articles.R:29:3',
'test-build-articles.R:57:3', 'test-build-articles.R:79:3',
'test-build-favicons.R:4:3', 'test-build-favicons.R:16:3',
'test-build-footer.R:12:3', 'test-build-footer.R:68:3',
'test-build-github.R:5:3', 'test-build-home-authors.R:16:3',
'test-build-home-authors.R:29:3', 'test-build-home-authors.R:90:3',
'test-build-home-authors.R:96:3', 'test-build-home-authors.R:198:3',
'test-build-home-community.R:11:3', 'test-build-home-index.R:39:3',
'test-build-home-index.R:58:3', 'test-build-home-index.R:86:3',
'test-build-home-index.R:107:3', 'test-build-home-index.R:116:3',
'test-build-home-index.R:125:3', 'test-build-home-index.R:136:3',
'test-build-news.R:16:3', 'test-build-news.R:52:3',
'test-build-news.R:105:3', 'test-build-news.R:110:3',
'test-build-news.R:115:3', 'test-build-news.R:188:3',
'test-build-news.R:207:3', 'test-build-news.R:221:3',
'test-build-news.R:235:3', 'test-build-news.R:247:3',
'test-build-redirects.R:10:3', 'test-build-redirects.R:27:3',
'test-build-reference-index.R:10:3', 'test-build-reference-index.R:60:3',
'test-build-reference-index.R:74:3', 'test-build-reference-index.R:115:3',
'test-build-reference-index.R:128:3', 'test-build-article.R:47:3',
'test-build-article.R:110:3', 'test-build-article.R:118:3',
'test-build-article.R:169:3', 'test-build-article.R:175:3',
'test-build-article.R:204:3', 'test-build-article.R:223:3',
'test-build-article.R:229:3', 'test-build-article.R:276:3',
'test-build-article.R:283:3', 'test-build-search-docs.R:39:3',
'test-build-search-docs.R:47:3', 'test-check-built.R:7:3',
'test-check.R:9:3', 'test-check.R:20:3', 'test-check.R:31:3',
'test-check.R:40:3', 'test-check.R:51:3', 'test-check.R:68:3',
'test-config.R:11:3', 'test-config.R:16:3', 'test-config.R:35:3',
'test-external-deps.R:4:3', 'test-development.R:54:3',
'test-highlight.R:14:3', 'test-highlight.R:28:3', 'test-highlight.R:56:3',
'test-markdown.R:24:3', 'test-markdown.R:61:3', 'test-navbar-menu.R:10:3',
'test-navbar-menu.R:20:3', 'test-navbar-menu.R:28:3',
'test-navbar-menu.R:50:3', 'test-navbar-menu.R:80:3',
'test-navbar-menu.R:84:3', 'test-navbar.R:3:3', 'test-navbar.R:15:3',
'test-navbar.R:25:3', 'test-navbar.R:88:3', 'test-navbar.R:103:3',
'test-navbar.R:124:4', 'test-navbar.R:133:3', 'test-navbar.R:172:3',
'test-init.R:3:3', 'test-init.R:57:3', 'test-preview.R:4:3',
'test-package.R:2:3', 'test-package.R:21:3', 'test-package.R:27:3',
'test-package.R:92:3', 'test-rd-example.R:112:3', 'test-render.R:6:3',
'test-render.R:48:3', 'test-rd-html.R:7:3', 'test-rd-html.R:32:3',
'test-rd-html.R:36:3', 'test-rd-html.R:53:3', 'test-rd-html.R:293:3',
'test-rd-html.R:365:3', 'test-rd-html.R:373:3', 'test-rd-html.R:384:3',
'test-rd-html.R:394:3', 'test-repo.R:53:3', 'test-theme.R:5:3',
'test-theme.R:36:3', 'test-topics-external.R:2:3',
'test-topics-external.R:10:3', 'test-templates.R:121:3',
'test-templates.R:128:3', 'test-templates.R:175:4',
'test-tweak-homepage.R:38:3', 'test-tweak-homepage.R:59:3',
'test-tweak-homepage.R:71:3', 'test-tweak-tags.R:61:3',
'test-tweak-tags.R:177:3', 'test-tweak-tags.R:268:3', 'test-usage.R:24:3',
'test-topics.R:18:3', 'test-topics.R:35:3', 'test-topics.R:70:3',
'test-topics.R:157:3', 'test-topics.R:169:3', 'test-utils-fs.R:2:3',
'test-utils-fs.R:9:3'
• On Windows (10): 'test-build-quarto-articles.R:2:3',
'test-build-quarto-articles.R:15:3', 'test-build-quarto-articles.R:33:3',
'test-build-quarto-articles.R:48:3', 'test-build-quarto-articles.R:64:3',
'test-build-quarto-articles.R:76:3', 'test-build-quarto-articles.R:93:3',
'test-figure.R:3:3', 'test-tweak-tabset.R:2:3', 'test-tweak-tabset.R:26:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-build-home-index.R:4:3'): messages about reading and writing ───
Error in `readRDS(path)`: error reading from connection
Backtrace:
▆
1. └─testthat::expect_snapshot(...) at test-build-home-index.R:4:3
2. └─rlang::cnd_signal(state$error)
[ FAIL 1 | WARN 0 | SKIP 135 | PASS 679 ]
Error: Test failures
Execution halted
Flavor: r-release-windows-x86_64
Version: 2.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [88s/60s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
11. └─httr2::req_perform(req)
12. └─httr2:::cache_pre_fetch(req)
13. ├─httr2:::resp_cache_info(cache_get(req))
14. │ └─httr2:::resp_cache_expires(resp, control)
15. │ ├─control %||% resp_cache_control(resp)
16. │ └─httr2:::resp_cache_control(resp)
17. │ └─httr2::resp_header(resp, "Cache-Control")
18. │ └─httr2:::check_response(resp)
19. │ └─httr2:::is_response(resp)
20. └─httr2:::cache_get(req)
21. └─base::readRDS(path)
[ FAIL 15 | WARN 0 | SKIP 129 | PASS 665 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-arm64
Version: 2.1.0
Check: running R code from vignettes
Result: ERROR
Errors in running code in vignettes:
when running code in ‘how-to-update-released-site.Rmd’
...
> knitr::opts_chunk$set(collapse = TRUE, comment = "#>",
+ eval = FALSE)
> gert::git_branch_checkout("main")
When sourcing ‘how-to-update-released-site.R’:
Error: could not find repository from '/private/var/folders/k4/0jwzxmln0nb8y6rkzprptb640000gq/T/RtmpwesuWa/file12b42371af680/vignettes'
Execution halted
‘accessibility.Rmd’ using ‘UTF-8’... [1s/1s] OK
‘customise.Rmd’ using ‘UTF-8’... [1s/1s] OK
‘how-to-update-released-site.Rmd’ using ‘UTF-8’... failed
‘linking.Rmd’ using ‘UTF-8’... [1s/1s] OK
‘metadata.Rmd’ using ‘UTF-8’... [0s/1s] OK
‘pkgdown.Rmd’ using ‘UTF-8’... [0s/1s] OK
‘translations.Rmd’ using ‘UTF-8’... [0s/1s] OK
‘quarto.qmd’ using ‘UTF-8’... [1s/1s] OK
Flavor: r-oldrel-macos-arm64
Version: 2.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [95s/80s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
11. └─httr2::req_perform(req)
12. └─httr2:::cache_pre_fetch(req)
13. ├─httr2:::resp_cache_info(cache_get(req))
14. │ └─httr2:::resp_cache_expires(resp, control)
15. │ ├─control %||% resp_cache_control(resp)
16. │ └─httr2:::resp_cache_control(resp)
17. │ └─httr2::resp_header(resp, "Cache-Control")
18. │ └─httr2:::check_response(resp)
19. │ └─httr2:::is_response(resp)
20. └─httr2:::cache_get(req)
21. └─base::readRDS(path)
[ FAIL 15 | WARN 0 | SKIP 128 | PASS 670 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64
Version: 2.1.0
Check: running R code from vignettes
Result: ERROR
Errors in running code in vignettes:
when running code in ‘how-to-update-released-site.Rmd’
...
> knitr::opts_chunk$set(collapse = TRUE, comment = "#>",
+ eval = FALSE)
> gert::git_branch_checkout("main")
When sourcing ‘how-to-update-released-site.R’:
Error: could not find repository from '/private/var/folders/2b/t0kwbtmn3p7brv2mvx39c9cr0000gn/T/RtmpmQuXWM/file101d4d618ecc/vignettes'
Execution halted
‘accessibility.Rmd’ using ‘UTF-8’... [1s/1s] OK
‘customise.Rmd’ using ‘UTF-8’... [1s/1s] OK
‘how-to-update-released-site.Rmd’ using ‘UTF-8’... failed
‘linking.Rmd’ using ‘UTF-8’... [1s/1s] OK
‘metadata.Rmd’ using ‘UTF-8’... [1s/1s] OK
‘pkgdown.Rmd’ using ‘UTF-8’... [1s/1s] OK
‘translations.Rmd’ using ‘UTF-8’... [1s/1s] OK
‘quarto.qmd’ using ‘UTF-8’... [1s/1s] OK
Flavor: r-oldrel-macos-x86_64
Version: 2.1.0
Check: tests
Result: ERROR
Running 'testthat.R' [95s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(pkgdown)
>
> test_check("pkgdown")
Starting 2 test processes
[ FAIL 1 | WARN 0 | SKIP 139 | PASS 665 ]
══ Skipped tests (139) ═════════════════════════════════════════════════════════
• On CRAN (124): 'test-build-reference.R:4:3', 'test-build-reference.R:105:3',
'test-build-articles.R:14:3', 'test-build-articles.R:29:3',
'test-build-articles.R:57:3', 'test-build-articles.R:79:3',
'test-build-favicons.R:4:3', 'test-build-favicons.R:16:3',
'test-build-footer.R:12:3', 'test-build-footer.R:68:3',
'test-build-github.R:5:3', 'test-build-home-authors.R:16:3',
'test-build-home-authors.R:29:3', 'test-build-home-authors.R:90:3',
'test-build-home-authors.R:96:3', 'test-build-home-authors.R:198:3',
'test-build-home-community.R:11:3', 'test-build-home-index.R:39:3',
'test-build-home-index.R:58:3', 'test-build-home-index.R:86:3',
'test-build-home-index.R:107:3', 'test-build-home-index.R:116:3',
'test-build-home-index.R:125:3', 'test-build-home-index.R:136:3',
'test-build-news.R:16:3', 'test-build-news.R:52:3',
'test-build-news.R:105:3', 'test-build-news.R:110:3',
'test-build-news.R:115:3', 'test-build-news.R:188:3',
'test-build-news.R:207:3', 'test-build-news.R:221:3',
'test-build-news.R:235:3', 'test-build-news.R:247:3',
'test-build-redirects.R:10:3', 'test-build-redirects.R:27:3',
'test-build-reference-index.R:10:3', 'test-build-reference-index.R:60:3',
'test-build-reference-index.R:74:3', 'test-build-reference-index.R:115:3',
'test-build-reference-index.R:128:3', 'test-build-search-docs.R:39:3',
'test-build-search-docs.R:47:3', 'test-check-built.R:7:3',
'test-check.R:9:3', 'test-check.R:20:3', 'test-check.R:31:3',
'test-check.R:40:3', 'test-check.R:51:3', 'test-check.R:68:3',
'test-config.R:11:3', 'test-config.R:16:3', 'test-config.R:35:3',
'test-build-article.R:47:3', 'test-build-article.R:110:3',
'test-build-article.R:118:3', 'test-build-article.R:169:3',
'test-build-article.R:175:3', 'test-build-article.R:204:3',
'test-build-article.R:223:3', 'test-build-article.R:229:3',
'test-build-article.R:276:3', 'test-build-article.R:283:3',
'test-external-deps.R:4:3', 'test-development.R:54:3',
'test-highlight.R:14:3', 'test-highlight.R:28:3', 'test-highlight.R:56:3',
'test-markdown.R:24:3', 'test-markdown.R:61:3', 'test-navbar-menu.R:10:3',
'test-navbar-menu.R:20:3', 'test-navbar-menu.R:28:3',
'test-navbar-menu.R:50:3', 'test-navbar-menu.R:80:3',
'test-navbar-menu.R:84:3', 'test-navbar.R:3:3', 'test-navbar.R:15:3',
'test-navbar.R:25:3', 'test-navbar.R:88:3', 'test-navbar.R:103:3',
'test-navbar.R:124:4', 'test-navbar.R:133:3', 'test-navbar.R:172:3',
'test-init.R:3:3', 'test-init.R:57:3', 'test-package.R:2:3',
'test-package.R:21:3', 'test-package.R:27:3', 'test-package.R:92:3',
'test-preview.R:4:3', 'test-rd-example.R:112:3', 'test-render.R:6:3',
'test-render.R:48:3', 'test-rd-html.R:7:3', 'test-rd-html.R:32:3',
'test-rd-html.R:36:3', 'test-rd-html.R:53:3', 'test-rd-html.R:293:3',
'test-rd-html.R:365:3', 'test-rd-html.R:373:3', 'test-rd-html.R:384:3',
'test-rd-html.R:394:3', 'test-repo.R:53:3', 'test-theme.R:5:3',
'test-theme.R:36:3', 'test-topics-external.R:2:3',
'test-topics-external.R:10:3', 'test-templates.R:121:3',
'test-templates.R:128:3', 'test-templates.R:175:4',
'test-tweak-homepage.R:38:3', 'test-tweak-homepage.R:59:3',
'test-tweak-homepage.R:71:3', 'test-tweak-tags.R:61:3',
'test-tweak-tags.R:177:3', 'test-usage.R:24:3', 'test-utils-fs.R:2:3',
'test-utils-fs.R:9:3', 'test-topics.R:18:3', 'test-topics.R:35:3',
'test-topics.R:70:3', 'test-topics.R:157:3', 'test-topics.R:169:3'
• On Windows (10): 'test-build-quarto-articles.R:2:3',
'test-build-quarto-articles.R:15:3', 'test-build-quarto-articles.R:33:3',
'test-build-quarto-articles.R:48:3', 'test-build-quarto-articles.R:64:3',
'test-build-quarto-articles.R:76:3', 'test-build-quarto-articles.R:93:3',
'test-figure.R:3:3', 'test-tweak-tabset.R:2:3', 'test-tweak-tabset.R:26:3'
• pandoc not available (5): 'test-markdown.R:30:3',
'test-tweak-reference.R:2:3', 'test-tweak-reference.R:106:3',
'test-tweak-reference.R:116:3', 'test-tweak-tags.R:251:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-build-home-index.R:4:3'): messages about reading and writing ───
Error in `readRDS(path)`: error reading from connection
Backtrace:
▆
1. └─testthat::expect_snapshot(...) at test-build-home-index.R:4:3
2. └─rlang::cnd_signal(state$error)
[ FAIL 1 | WARN 0 | SKIP 139 | PASS 665 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: NOTE: 5, OK: 8
Version: 7.3.2
Check: compiled code
Result: NOTE
File ‘roxygen2/libs/roxygen2.so’:
Found non-API calls to R: ‘SETLENGTH’, ‘SET_GROWABLE_BIT’,
‘SET_TRUELENGTH’
Compiled code should not call non-API entry points in R.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 7.3.2
Check: compiled code
Result: NOTE
File 'roxygen2/libs/x64/roxygen2.dll':
Found non-API calls to R: 'SETLENGTH', 'SET_GROWABLE_BIT',
'SET_TRUELENGTH'
Compiled code should not call non-API entry points in R.
See 'Writing portable packages' in the 'Writing R Extensions' manual,
and section 'Moving into C API compliance' for issues with the use of
non-API entry points.
Flavor: r-devel-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: WARN: 1, NOTE: 5, OK: 7
Version: 0.1.1
Check: compiled code
Result: NOTE
File ‘S7/libs/S7.so’:
Found non-API calls to R: ‘PRCODE’, ‘SET_PRVALUE’
Compiled code should not call non-API entry points in R.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.1.1
Check: compiled code
Result: NOTE
File 'S7/libs/x64/S7.dll':
Found non-API calls to R: 'PRCODE', 'SET_PRVALUE'
Compiled code should not call non-API entry points in R.
See 'Writing portable packages' in the 'Writing R Extensions' manual,
and section 'Moving into C API compliance' for issues with the use of
non-API entry points.
Flavor: r-devel-windows-x86_64
Version: 0.1.1
Check: S3 generic/method consistency
Result: WARN
matrixOps:
function(x, y)
matrixOps.S7_object:
function(e1, e2)
See section 'Generic functions and methods' in the 'Writing R
Extensions' manual.
Flavor: r-oldrel-windows-x86_64
Current CRAN status: NOTE: 3, OK: 10
Version: 1.5.1
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
str_replace.Rd: stri_replace
str_split.Rd: stri_split
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Current CRAN status: NOTE: 9, OK: 4
Version: 3.2.1.1
Check: compiled code
Result: NOTE
File ‘testthat/libs/testthat.so’:
Found non-API calls to R: ‘SET_BODY’, ‘SET_CLOENV’, ‘SET_FORMALS’
Compiled code should not call non-API entry points in R.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 3.2.1.1
Check: compiled code
Result: NOTE
File 'testthat/libs/x64/testthat.dll':
Found non-API calls to R: 'SET_BODY', 'SET_CLOENV', 'SET_FORMALS'
Compiled code should not call non-API entry points in R.
See 'Writing portable packages' in the 'Writing R Extensions' manual,
and section 'Moving into C API compliance' for issues with the use of
non-API entry points.
Flavor: r-devel-windows-x86_64
Version: 3.2.1.1
Check: installed package size
Result: NOTE
installed size is 8.9Mb
sub-directories of 1Mb or more:
R 2.0Mb
libs 5.4Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Current CRAN status: ERROR: 1, NOTE: 5, OK: 7
Version: 1.3.1
Check: compiled code
Result: NOTE
File ‘tidyr/libs/tidyr.so’:
Found non-API calls to R: ‘SETLENGTH’, ‘SET_GROWABLE_BIT’,
‘SET_TRUELENGTH’
Compiled code should not call non-API entry points in R.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.3.1
Check: data for non-ASCII characters
Result: NOTE
Note: found 24 marked UTF-8 strings
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.3.1
Check: compiled code
Result: NOTE
File 'tidyr/libs/x64/tidyr.dll':
Found non-API calls to R: 'SETLENGTH', 'SET_GROWABLE_BIT',
'SET_TRUELENGTH'
Compiled code should not call non-API entry points in R.
See 'Writing portable packages' in the 'Writing R Extensions' manual,
and section 'Moving into C API compliance' for issues with the use of
non-API entry points.
Flavor: r-devel-windows-x86_64
Version: 1.3.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘in-packages.Rmd’ using rmarkdown
--- finished re-building ‘in-packages.Rmd’
--- re-building ‘nest.Rmd’ using rmarkdown
--- finished re-building ‘nest.Rmd’
--- re-building ‘pivot.Rmd’ using rmarkdown
Quitting from lines 44-47 [setup] (pivot.Rmd)
Error: processing vignette 'pivot.Rmd' failed with diagnostics:
there is no package called 'readr'
--- failed re-building ‘pivot.Rmd’
--- re-building ‘programming.Rmd’ using rmarkdown
--- finished re-building ‘programming.Rmd’
--- re-building ‘rectangle.Rmd’ using rmarkdown
--- finished re-building ‘rectangle.Rmd’
--- re-building ‘tidy-data.Rmd’ using rmarkdown
--- finished re-building ‘tidy-data.Rmd’
SUMMARY: processing the following file failed:
‘pivot.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-arm64
Current CRAN status: OK: 13
Current CRAN status: OK: 13
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