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A tool for survival analysis using a discrete time approach with ensemble binary classification. 'spect' provides a simple interface consistent with commonly used R data analysis packages, such as 'caret', a variety of parameter options to help facilitate search automation, a high degree of transparency to the end-user - all intermediate data sets and parameters are made available for further analysis and useful, out-of-the-box visualizations of model performance. Methods for transforming survival data into discrete-time are adapted from the 'autosurv' package by Suresh et al., (2022) <doi:10.1186/s12874-022-01679-6>.
| Version: | 1.0 |
| Depends: | R (≥ 4.0), futile.logger, dplyr |
| Imports: | doParallel, ggplot2, survminer, riskRegression, caret, caretEnsemble, survival, rlang |
| Suggests: | knitr, rmarkdown, randomForest, kernlab, testthat (≥ 3.0.0) |
| Published: | 2025-04-08 |
| DOI: | 10.32614/CRAN.package.spect |
| Author: | Stephen Abrams [aut, cre] |
| Maintainer: | Stephen Abrams <stephen.abrams at gmail.com> |
| BugReports: | https://github.com/dawdawdo/spect/issues |
| License: | GPL-3 |
| URL: | https://github.com/dawdawdo/spect |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | spect results |
| Reference manual: | spect.pdf |
| Vignettes: |
create_synthetic_data (source, R code) modeling_with_binary_classifiers (source, R code) training_synthetic_data (source, R code) |
| Package source: | spect_1.0.tar.gz |
| Windows binaries: | r-devel: spect_1.0.zip, r-release: spect_1.0.zip, r-oldrel: not available |
| macOS binaries: | r-devel (arm64): spect_1.0.tgz, r-release (arm64): spect_1.0.tgz, r-oldrel (arm64): spect_1.0.tgz, r-devel (x86_64): spect_1.0.tgz, r-release (x86_64): spect_1.0.tgz, r-oldrel (x86_64): spect_1.0.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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