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Software for genomic prediction with the RR-BLUP mixed model (Endelman 2011, <doi:10.3835/plantgenome2011.08.0024>). One application is to estimate marker effects by ridge regression; alternatively, BLUPs can be calculated based on an additive relationship matrix or a Gaussian kernel.
| Version: | 4.6.3 |
| Depends: | R (≥ 4.0) |
| Imports: | stats, graphics, grDevices, parallel |
| Published: | 2023-12-10 |
| Author: | Jeffrey Endelman |
| Maintainer: | Jeffrey Endelman <endelman at wisc.edu> |
| License: | GPL-3 |
| URL: | <https://potatobreeding.cals.wisc.edu/software/> |
| NeedsCompilation: | no |
| Citation: | rrBLUP citation info |
| Materials: | NEWS |
| In views: | Agriculture, MixedModels |
| CRAN checks: | rrBLUP results |
| Reference manual: | rrBLUP.pdf |
| Package source: | rrBLUP_4.6.3.tar.gz |
| Windows binaries: | r-devel: rrBLUP_4.6.3.zip, r-release: rrBLUP_4.6.3.zip, r-oldrel: rrBLUP_4.6.3.zip |
| macOS binaries: | r-release (arm64): rrBLUP_4.6.3.tgz, r-oldrel (arm64): rrBLUP_4.6.3.tgz, r-release (x86_64): rrBLUP_4.6.3.tgz, r-oldrel (x86_64): rrBLUP_4.6.3.tgz |
| Old sources: | rrBLUP archive |
| Reverse imports: | BWGS, factReg, Ghat, GROAN, PopVar, RAINBOWR, STGS |
| Reverse suggests: | BG2, dartR, dartR.base, dartR.captive, dartR.spatial, GWAS.BAYES, MoBPS, polyRAD |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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