pliman: Tools for Plant Image Analysis

Tools for both single and batch image manipulation and analysis (Olivoto, 2022 <doi:10.1111/2041-210X.13803>) and phytopathometry (Olivoto et al., 2022 <doi:10.1007/S40858-021-00487-5>). The tools can be used for the quantification of leaf area, object counting, extraction of image indexes, shape measurement, object landmark identification, and Elliptical Fourier Analysis of object outlines (Claude (2008) <doi:10.1007/978-0-387-77789-4>). The package also provides a comprehensive pipeline for generating shapefiles with complex layouts and supports high-throughput phenotyping of RGB, multispectral, and hyperspectral orthomosaics. This functionality facilitates field phenotyping using UAV- or satellite-based imagery.

Version:	3.0.0
Depends:	R (≥ 4.1)
Imports:	doFuture, dplyr, exactextractr, foreach, future, methods, purrr, Rcpp, sf, terra
LinkingTo:	Rcpp, RcppArmadillo
Suggests:	BiocManager, curl, EBImage, fields, knitr, leafem (≥ 0.2.0), leaflet (≥ 2.1.2), mapedit (≥ 0.6.0), mapview (≥ 2.11.0), pak, rmarkdown, rstudioapi, tidyr
Published:	2024-11-06
DOI:	10.32614/CRAN.package.pliman
Author:	Tiago Olivoto [aut, cre]
Maintainer:	Tiago Olivoto <tiagoolivoto at gmail.com>
BugReports:	https://github.com/nepem-ufsc//pliman/issues
License:	GPL (≥ 3)
URL:	https://nepem-ufsc.github.io/pliman/, https://github.com/nepem-ufsc//pliman
NeedsCompilation:	yes
Language:	en-US
Citation:	pliman citation info
Materials:	NEWS
In views:	Agriculture
CRAN checks:	pliman results

Documentation:

Reference manual:

pliman.pdf

Downloads:

Package source:	pliman_3.0.0.tar.gz
Windows binaries:	r-devel: pliman_3.0.0.zip, r-release: pliman_3.0.0.zip, r-oldrel: pliman_3.0.0.zip
macOS binaries:	r-release (arm64): pliman_3.0.0.tgz, r-oldrel (arm64): pliman_3.0.0.tgz, r-release (x86_64): pliman_3.0.0.tgz, r-oldrel (x86_64): pliman_3.0.0.tgz
Old sources:	pliman archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=pliman to link to this page.