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Functions for phylocom integration, community analyses, null-models, traits and evolution. Implements numerous ecophylogenetic approaches including measures of community phylogenetic and trait diversity, phylogenetic signal, estimation of trait values for unobserved taxa, null models for community and phylogeny randomizations, and utility functions for data input/output and phylogeny plotting. A full description of package functionality and methods are provided by Kembel et al. (2010) <doi:10.1093/bioinformatics/btq166>.
| Version: | 1.8.2 |
| Depends: | ape, vegan, nlme, methods |
| Suggests: | brglm, circular, corpcor, quantreg |
| Published: | 2020-06-10 |
| DOI: | 10.32614/CRAN.package.picante |
| Author: | Steven W. Kembel, David D. Ackerly, Simon P. Blomberg, Will K. Cornwell, Peter D. Cowan, Matthew R. Helmus, Helene Morlon, Campbell O. Webb |
| Maintainer: | Steven W. Kembel <steve.kembel at gmail.com> |
| License: | GPL-2 |
| NeedsCompilation: | yes |
| Citation: | picante citation info |
| Materials: | README |
| In views: | Phylogenetics |
| CRAN checks: | picante results |
| Reference manual: | picante.pdf |
| Vignettes: |
Data and analysis in picante |
| Package source: | picante_1.8.2.tar.gz |
| Windows binaries: | r-devel: picante_1.8.2.zip, r-release: picante_1.8.2.zip, r-oldrel: picante_1.8.2.zip |
| macOS binaries: | r-release (arm64): picante_1.8.2.tgz, r-oldrel (arm64): picante_1.8.2.tgz, r-release (x86_64): picante_1.8.2.tgz, r-oldrel (x86_64): picante_1.8.2.tgz |
| Old sources: | picante archive |
| Reverse depends: | EcoIndR, idar |
| Reverse imports: | betapart, bivariatemaps, CommEcol, DAMOCLES, NetFACS, nodiv, PCPS, pez, recluster |
| Reverse suggests: | canaper, cati, ecolottery, enveomics.R, fishtree, microeco, pctax, phyr, RRphylo, treestats |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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