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An implementation of the nodiv algorithm, see Borregaard, M.K., Rahbek, C., Fjeldsaa, J., Parra, J.L., Whittaker, R.J. & Graham, C.H. 2014. Node-based analysis of species distributions. Methods in Ecology and Evolution 5(11): 1225-1235. <doi:10.1111/2041-210X.12283>. Package for phylogenetic analysis of species distributions. The main function goes through each node in the phylogeny, compares the distributions of the two descendant nodes, and compares the result to a null model. This highlights nodes where major distributional divergence have occurred. The distributional divergence for these nodes is mapped.
Version: | 1.4.2 |
Depends: | R (≥ 3.0) |
Imports: | picante, raster, ape, sp, vegan, utils |
Suggests: | RColorBrewer, parallel, testthat, colorspace |
Published: | 2023-08-21 |
DOI: | 10.32614/CRAN.package.nodiv |
Author: | Michael Krabbe Borregaard |
Maintainer: | Michael Krabbe Borregaard <mkborregaard at sund.ku.dk> |
License: | MIT + file LICENSE |
URL: | https://github.com/mkborregaard/nodiv |
NeedsCompilation: | no |
Citation: | nodiv citation info |
Materials: | README |
CRAN checks: | nodiv results |
Reference manual: | nodiv.pdf |
Package source: | nodiv_1.4.2.tar.gz |
Windows binaries: | r-devel: nodiv_1.4.2.zip, r-release: nodiv_1.4.2.zip, r-oldrel: nodiv_1.4.2.zip |
macOS binaries: | r-release (arm64): nodiv_1.4.2.tgz, r-oldrel (arm64): nodiv_1.4.2.tgz, r-release (x86_64): nodiv_1.4.2.tgz, r-oldrel (x86_64): nodiv_1.4.2.tgz |
Old sources: | nodiv archive |
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These binaries (installable software) and packages are in development.
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