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ontologyPlot: Visualising Sets of Ontological Terms

Create R plots visualising ontological terms and the relationships between them with various graphical options - Greene et al. 2017 <doi:10.1093/bioinformatics/btw763>.

Version: 1.7
Depends: R (≥ 3.0.0)
Imports: methods, ontologyIndex, paintmap, Rgraphviz
Suggests: knitr, rmarkdown
Published: 2024-02-20
Author: Daniel Greene
Maintainer: Daniel Greene <dg333 at cam.ac.uk>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
CRAN checks: ontologyPlot results

Documentation:

Reference manual: ontologyPlot.pdf
Vignettes: Plotting Ontological Terms
Plotting Term Grids

Downloads:

Package source: ontologyPlot_1.7.tar.gz
Windows binaries: r-devel: ontologyPlot_1.7.zip, r-release: ontologyPlot_1.7.zip, r-oldrel: ontologyPlot_1.7.zip
macOS binaries: r-release (arm64): ontologyPlot_1.7.tgz, r-oldrel (arm64): ontologyPlot_1.7.tgz, r-release (x86_64): ontologyPlot_1.7.tgz, r-oldrel (x86_64): ontologyPlot_1.7.tgz
Old sources: ontologyPlot archive

Reverse dependencies:

Reverse imports: ontoProc, scOntoMatch, SimReg
Reverse suggests: BiocOncoTK, pogos

Linking:

Please use the canonical form https://CRAN.R-project.org/package=ontologyPlot to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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