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germinationmetrics: Seed Germination Indices and Curve Fitting

Provides functions to compute various germination indices such as germinability, median germination time, mean germination time, mean germination rate, speed of germination, Timson's index, germination value, coefficient of uniformity of germination, uncertainty of germination process, synchrony of germination etc. from germination count data. Includes functions for fitting cumulative seed germination curves using four-parameter hill function and computation of associated parameters. See the vignette for more, including full list of citations for the methods implemented.

Version: 0.1.8
Depends: R (≥ 3.5.0)
Imports: broom, data.table, ggplot2, ggrepel, mathjaxr, gslnls, plyr, Rdpack, stats, utils
Suggests: httr, knitr, pander, RCurl, reshape2, rmarkdown, testthat (≥ 3.0.0), XML
Published: 2023-08-18
DOI: 10.32614/CRAN.package.germinationmetrics
Author: J. Aravind ORCID iD [aut, cre], S. Vimala Devi [aut], J. Radhamani [aut], Sherry Rachel Jacob [aut], Kalyani Srinivasan [aut], ICAR-NBGPR [cph] (www.nbpgr.ernet.in)
Maintainer: J. Aravind <j.aravind at icar.gov.in>
BugReports: https://github.com/aravind-j/germinationmetrics/issues
License: GPL-2 | GPL-3
Copyright: 2017-2023, ICAR-NBPGR
URL: https://github.com/aravind-j/germinationmetrics, https://aravind-j.github.io/germinationmetrics/ https://CRAN.R-project.org/package=germinationmetrics https://doi.org/10.5281/zenodo.1219630
NeedsCompilation: no
Citation: germinationmetrics citation info
Materials: README NEWS
CRAN checks: germinationmetrics results

Documentation:

Reference manual: germinationmetrics.pdf
Vignettes: Introduction

Downloads:

Package source: germinationmetrics_0.1.8.tar.gz
Windows binaries: r-devel: germinationmetrics_0.1.8.zip, r-release: germinationmetrics_0.1.8.zip, r-oldrel: germinationmetrics_0.1.8.zip
macOS binaries: r-release (arm64): germinationmetrics_0.1.8.tgz, r-oldrel (arm64): germinationmetrics_0.1.8.tgz, r-release (x86_64): germinationmetrics_0.1.8.tgz, r-oldrel (x86_64): germinationmetrics_0.1.8.tgz
Old sources: germinationmetrics archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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