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Provides a convenient framework to simulate, test, power, and visualize data for differential expression studies with lognormal or negative binomial outcomes. Supported designs are two-sample comparisons of independent or dependent outcomes. Power may be summarized in the context of controlling the per-family error rate or family-wise error rate. Negative binomial methods are described in Yu, Fernandez, and Brock (2017) <doi:10.1186/s12859-017-1648-2> and Yu, Fernandez, and Brock (2020) <doi:10.1186/s12859-020-3541-7>.
Version: | 2024.12.4 |
Depends: | R (≥ 4.2.0) |
Imports: | Rdpack, stats, mvnfast, glmmTMB, dplyr, multidplyr, ggplot2, scales |
Suggests: | tinytest, rmarkdown |
Published: | 2024-12-08 |
DOI: | 10.32614/CRAN.package.depower |
Author: | Brett Klamer [aut, cre], Lianbo Yu [aut] |
Maintainer: | Brett Klamer <code at brettklamer.com> |
License: | MIT + file LICENSE |
URL: | https://brettklamer.com/work/depower/, https://bitbucket.org/bklamer/depower/ |
NeedsCompilation: | no |
Language: | en-US |
Citation: | depower citation info |
Materials: | README NEWS |
CRAN checks: | depower results |
Reference manual: | depower.pdf |
Package source: | depower_2024.12.4.tar.gz |
Windows binaries: | r-devel: depower_2024.12.4.zip, r-release: depower_2024.12.4.zip, r-oldrel: depower_2024.12.4.zip |
macOS binaries: | r-release (arm64): depower_2024.12.4.tgz, r-oldrel (arm64): depower_2024.12.4.tgz, r-release (x86_64): depower_2024.12.4.tgz, r-oldrel (x86_64): depower_2024.12.4.tgz |
Please use the canonical form https://CRAN.R-project.org/package=depower to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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