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biogram: N-Gram Analysis of Biological Sequences
Tools for extraction and analysis of various
n-grams (k-mers) derived from biological sequences (proteins
or nucleic acids). Contains QuiPT (quick permutation test) for fast
feature-filtering of the n-gram data.
| Version: |
1.6.3 |
| Depends: |
R (≥ 3.0.0), slam |
| Imports: |
combinat, entropy, partitions |
| Suggests: |
ggplot2, knitr, testthat |
| Published: |
2020-03-31 |
| DOI: |
10.32614/CRAN.package.biogram |
| Author: |
Michal Burdukiewicz
 [cre, aut],
Piotr Sobczyk [aut],
Chris Lauber [aut],
Dominik Rafacz [aut],
Katarzyna Sidorczuk
[ctb] |
| Maintainer: |
Michal Burdukiewicz <michalburdukiewicz at gmail.com> |
| BugReports: |
https://github.com/michbur/biogram/issues |
| License: |
GPL-3 |
| URL: |
https://github.com/michbur/biogram |
| NeedsCompilation: |
no |
| Citation: |
biogram citation info |
| Materials: |
README ChangeLog |
| CRAN checks: |
biogram results |
Documentation:
Downloads:
Reverse dependencies:
Linking:
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https://CRAN.R-project.org/package=biogram
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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