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Transcriptome visualization from sample trait statistics to gene expression analysis. Six categories include "Samples Statistics", "Traits Analysis", "Differential Expression Analysis", "Advanced Analysis", "GO and KEGG Enrichment", "Tables Operations", with complete sample data.
Version: | 2.0.0 |
Depends: | R (≥ 3.5), Biobase (≥ 2.5.5), e1071 (≥ 1.7-0) |
Imports: | stats, utils, grid, graphics, grDevices, ggplot2, ggsci, reshape2, ggpubr, ggcorrplot, ggforce, vegan, venn, UpSetR, circlize, randomcoloR, ComplexHeatmap, EnhancedVolcano, GGally, survival, survminer, Rtsne, umap, dplyr, tidyr, clusterProfiler, enrichplot, ggnewscale, igraph, WGCNA, stringr, pheatmap, RColorBrewer, ggpolypath, factoextra, ggrepel, cowplot, ggplotify, plotrix, Mfuzz, shiny |
Suggests: | knitr, rmarkdown |
Published: | 2023-08-28 |
DOI: | 10.32614/CRAN.package.TOmicsVis |
Author: | Benben Miao [aut, cre], Wei Dong [aut] |
Maintainer: | Benben Miao <benben.miao at outlook.com> |
BugReports: | https://github.com/benben-miao/TOmicsVis/issues/ |
License: | MIT + file LICENSE |
URL: | https://benben-miao.github.io/TOmicsVis/ |
NeedsCompilation: | no |
Materials: | README NEWS |
CRAN checks: | TOmicsVis results |
Reference manual: | TOmicsVis.pdf |
Vignettes: |
Tutorials |
Package source: | TOmicsVis_2.0.0.tar.gz |
Windows binaries: | r-devel: TOmicsVis_2.0.0.zip, r-release: TOmicsVis_2.0.0.zip, r-oldrel: TOmicsVis_2.0.0.zip |
macOS binaries: | r-release (arm64): TOmicsVis_2.0.0.tgz, r-oldrel (arm64): not available, r-release (x86_64): TOmicsVis_2.0.0.tgz, r-oldrel (x86_64): not available |
Old sources: | TOmicsVis archive |
Please use the canonical form https://CRAN.R-project.org/package=TOmicsVis to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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