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SMAHP (pronounced as SOO-MAP) is a novel multi-omics framework for causal mediation analysis of high-dimensional proteogenomic data with survival outcomes. The full methodological details can be found in our recent preprint by Ahn S et al. (2025) <doi:10.48550/arXiv.2503.08606>.
Version: | 0.0.5 |
Depends: | R (≥ 3.5.0) |
Imports: | data.table, fdrtool, ncvreg, penAFT, survival, stats, glmnet |
Suggests: | knitr, rmarkdown, testthat (≥ 3.0.0) |
Published: | 2025-03-24 |
DOI: | 10.32614/CRAN.package.SMAHP |
Author: | Seungjun Ahn |
Maintainer: | Weijia Fu <weijia.fu at mountsinai.org> |
License: | GPL-3 |
NeedsCompilation: | no |
Language: | en-US |
CRAN checks: | SMAHP results |
Reference manual: | SMAHP.pdf |
Vignettes: |
SMAHP (source, R code) |
Package source: | SMAHP_0.0.5.tar.gz |
Windows binaries: | r-devel: SMAHP_0.0.5.zip, r-release: SMAHP_0.0.5.zip, r-oldrel: SMAHP_0.0.5.zip |
macOS binaries: | r-devel (arm64): SMAHP_0.0.5.tgz, r-release (arm64): SMAHP_0.0.5.tgz, r-oldrel (arm64): SMAHP_0.0.5.tgz, r-devel (x86_64): SMAHP_0.0.5.tgz, r-release (x86_64): SMAHP_0.0.5.tgz, r-oldrel (x86_64): SMAHP_0.0.5.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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