CRAN Package Check Results for Maintainer ‘Peter Carbonetto <peter.carbonetto at gmail.com>’

Last updated on 2024-05-02 01:57:47 CEST.

Package	ERROR	NOTE	OK
EbayesThresh			12
ebnm			12
fastTopics	1	11
mashr		5	7
mixsqp			12
susieR			12
varbvs			12

Package EbayesThresh

Current CRAN status: OK: 12

Package ebnm

Current CRAN status: OK: 12

Package fastTopics

Current CRAN status: ERROR: 1, NOTE: 11

Version: 0.6-163
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘NNLM’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.6-163
Check: for GNU extensions in Makefiles
Result: NOTE GNU make is a SystemRequirements. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.6-163
Check: installed package size
Result: NOTE installed size is 5.6Mb sub-directories of 1Mb or more: data 4.3Mb Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.6-163
Check: tests
Result: ERROR Running ‘testthat.R’ [16s/18s] Running the tests in ‘tests/testthat.R’ failed. Last 13 lines of output: 2. │ └─base::withVisible(...elt(i)) 3. └─fastTopics::umap_plot(fit1, fill = "loading", verbose = FALSE) 4. └─fastTopics::umap_from_topics(fit, dims = 2, ...) 5. └─uwot::umap(...) 6. └─uwot:::uwot(...) 7. └─uwot:::spectral_init(V, ndim = n_components, verbose = verbose) 8. └─uwot:::irlba_tsvd_normalized_laplacian_init(A, ndim, verbose = FALSE) 9. └─uwot:::irlba_spectral_tsvd(L, ndim + 1) 10. ├─base::suppressWarnings(...) 11. │ └─base::withCallingHandlers(...) 12. └─irlba::irlba(L, nv = n, nu = 0, maxit = iters) [ FAIL 1 | WARN 3 | SKIP 7 | PASS 234 ] Error: Test failures Execution halted Flavor: r-oldrel-macos-arm64

Package mashr

Current CRAN status: NOTE: 5, OK: 7

Version: 0.2.79
Check: dependencies in R code
Result: NOTE Namespace in Imports field not imported from: ‘softImpute’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.2.79
Check: installed package size
Result: NOTE installed size is 8.3Mb sub-directories of 1Mb or more: libs 7.4Mb Flavors: r-release-macos-arm64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package mixsqp

Current CRAN status: OK: 12

Package susieR

Current CRAN status: OK: 12

Package varbvs

Current CRAN status: OK: 12