CRAN Package Check Results for Maintainer ‘Martin R. Smith <martin.smith at durham.ac.uk>’

Last updated on 2024-05-02 01:57:43 CEST.

Package	ERROR	NOTE	OK
CongreveLamsdell2016			13
PlotTools			12
Quartet			13
Rogue	1		11
TBRDist		12
Ternary		8	5
TotalCopheneticIndex			12
TreeDist		12
TreeSearch		7	6
TreeTools		11	1

Package CongreveLamsdell2016

Current CRAN status: OK: 13

Package PlotTools

Current CRAN status: OK: 12

Package Quartet

Current CRAN status: OK: 13

Package Rogue

Current CRAN status: ERROR: 1, OK: 11

Additional issues

rchk

Version: 2.1.6
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'Bayesian.Rmd' using rmarkdown Could not fetch https://info.orcid.org/wp-content/uploads/2020/12/orcid_16x16.gif HttpExceptionRequest Request { host = "info.orcid.org" port = 443 secure = True requestHeaders = [] path = "/wp-content/uploads/2020/12/orcid_16x16.gif" queryString = "" method = "GET" proxy = Nothing rawBody = False redirectCount = 10 responseTimeout = ResponseTimeoutDefault requestVersion = HTTP/1.1 } (ConnectionFailure user error (Network.Socket.gai_strerror not supported: 11001)) Error: processing vignette 'Bayesian.Rmd' failed with diagnostics: pandoc document conversion failed with error 61 --- failed re-building 'Bayesian.Rmd' SUMMARY: processing the following file failed: 'Bayesian.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-oldrel-windows-x86_64

Package TBRDist

Current CRAN status: NOTE: 12

Version: 1.0.2
Check: C++ specification
Result: NOTE Specified C++11: please drop specification unless essential Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.0.2
Check: LazyData
Result: NOTE 'LazyData' is specified without a 'data' directory Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.0.2
Check: installed package size
Result: NOTE installed size is 5.3Mb sub-directories of 1Mb or more: libs 5.1Mb Flavor: r-oldrel-macos-arm64

Package Ternary

Current CRAN status: NOTE: 8, OK: 5

Version: 2.3.1
Check: installed package size
Result: NOTE installed size is 7.0Mb sub-directories of 1Mb or more: doc 5.9Mb Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package TotalCopheneticIndex

Current CRAN status: OK: 12

Package TreeDist

Current CRAN status: NOTE: 12

Version: 2.7.0
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘TreeDistData’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 2.7.0
Check: installed package size
Result: NOTE installed size is 5.9Mb sub-directories of 1Mb or more: doc 5.0Mb Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package TreeSearch

Current CRAN status: NOTE: 7, OK: 6

Version: 1.5.0
Check: installed package size
Result: NOTE installed size is 5.6Mb sub-directories of 1Mb or more: datasets 1.6Mb doc 1.3Mb libs 1.0Mb Flavors: r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package TreeTools

Current CRAN status: NOTE: 11, OK: 1

Version: 1.10.0
Check: Rd files
Result: NOTE checkRd: (-1) ReadTntTree.Rd:37: Lost braces 37 | \link{TNTOrder}{\code{tnt} order}, | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64

Version: 1.10.0
Check: installed package size
Result: NOTE installed size is 5.3Mb sub-directories of 1Mb or more: R 1.0Mb libs 3.2Mb Flavors: r-release-macos-arm64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64