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Three methods to calculate R2 for models with correlated errors, including Phylogenetic GLS, Phylogenetic Logistic Regression, Linear Mixed Models (LMMs), and Generalized Linear Mixed Models (GLMMs). See details in Ives 2018 <doi:10.1093/sysbio/syy060>.
| Version: | 1.1.1 |
| Depends: | R (≥ 3.0), stats |
| Imports: | lme4, phylolm (≥ 2.6.2), ape, utils, Matrix, nlme, phyr (≥ 1.0.3) |
| Suggests: | testthat, mvtnorm |
| Published: | 2023-08-21 |
| DOI: | 10.32614/CRAN.package.rr2 |
| Author: | Anthony Ives [aut, cre], Daijiang Li [ctb] |
| Maintainer: | Anthony Ives <arives at wisc.edu> |
| BugReports: | https://github.com/arives/rr2/issues |
| License: | GPL-3 |
| URL: | https://github.com/arives/rr2 |
| NeedsCompilation: | no |
| Citation: | rr2 citation info |
| Materials: | README NEWS |
| In views: | MixedModels |
| CRAN checks: | rr2 results |
| Reference manual: | rr2.pdf |
| Package source: | rr2_1.1.1.tar.gz |
| Windows binaries: | r-devel: rr2_1.1.1.zip, r-release: rr2_1.1.1.zip, r-oldrel: rr2_1.1.1.zip |
| macOS binaries: | r-release (arm64): rr2_1.1.1.tgz, r-oldrel (arm64): rr2_1.1.1.tgz, r-release (x86_64): rr2_1.1.1.tgz, r-oldrel (x86_64): rr2_1.1.1.tgz |
| Old sources: | rr2 archive |
| Reverse depends: | phylolm.hp |
| Reverse suggests: | lme4, phyr |
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