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rnaCrosslinkOO: Analysis of RNA Crosslinking Data

Analysis of RNA crosslinking data for RNA structure prediction. The package is suitable for the analysis of RNA structure cross-linking data and chemical probing data.

Version: 0.1.4
Depends: seqinr, GenomicRanges, stats
Imports: ggplot2, reshape2, MASS, mixtools, utils, S4Vectors, patchwork, doParallel, igraph, R4RNA, RColorBrewer, IRanges, foreach, grDevices, heatmap3, TopDom, tidyverse, RRNA, ggrepel, methods, parallel, ClassDiscovery
Suggests: knitr, rmarkdown, testthat (≥ 3.0.0)
Published: 2024-07-10
DOI: 10.32614/CRAN.package.rnaCrosslinkOO
Author: Jonathan Price ORCID iD [aut, cre], Andrew Lim [ctb]
Maintainer: Jonathan Price <jlp76 at cam.ac.uk>
BugReports: https://github.com/JLP-BioInf/rnaCrosslinkOO/issues
License: GPL-3
NeedsCompilation: no
Citation: rnaCrosslinkOO citation info
Materials: README
CRAN checks: rnaCrosslinkOO results

Documentation:

Reference manual: rnaCrosslinkOO.pdf
Vignettes: rnaCrosslinksOO

Downloads:

Package source: rnaCrosslinkOO_0.1.4.tar.gz
Windows binaries: r-devel: rnaCrosslinkOO_0.1.4.zip, r-release: rnaCrosslinkOO_0.1.4.zip, r-oldrel: not available
macOS binaries: r-release (arm64): not available, r-oldrel (arm64): not available, r-release (x86_64): rnaCrosslinkOO_0.1.4.tgz, r-oldrel (x86_64): not available
Old sources: rnaCrosslinkOO archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=rnaCrosslinkOO to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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