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Provides an infrastructure for efficient processing of large-scale genetic and phenotypic data including core functions for: 1) fitting linear mixed models, 2) constructing marker-based genomic relationship matrices, 3) estimating genetic parameters (heritability and correlation), 4) performing genomic prediction and genetic risk profiling, and 5) single or multi-marker association analyses. Rohde et al. (2019) <doi:10.1101/503631>.
| Version: | 1.1.2 |
| Depends: | R (≥ 3.3.0) |
| Imports: | Rcpp (≥ 1.0.5), data.table, parallel, statmod, stats, MCMCpack, MASS, coda, corpcor |
| LinkingTo: | Rcpp, RcppArmadillo |
| Published: | 2023-09-07 |
| Author: | Peter Soerensen [aut, cre], Palle Duun Rohde [aut], Izel Fourie Soerensen [aut] |
| Maintainer: | Peter Soerensen <peter.sorensen at r-qgg.org> |
| BugReports: | https://github.com/psoerensen/qgg/issues |
| License: | GPL-3 |
| URL: | https://github.com/psoerensen/qgg |
| NeedsCompilation: | yes |
| Materials: | README NEWS |
| In views: | Agriculture |
| CRAN checks: | qgg results |
| Reference manual: | qgg.pdf |
| Package source: | qgg_1.1.2.tar.gz |
| Windows binaries: | r-devel: qgg_1.1.2.zip, r-release: qgg_1.1.2.zip, r-oldrel: qgg_1.1.2.zip |
| macOS binaries: | r-release (arm64): qgg_1.1.2.tgz, r-oldrel (arm64): qgg_1.1.2.tgz, r-release (x86_64): qgg_1.1.2.tgz, r-oldrel (x86_64): qgg_1.1.2.tgz |
| Old sources: | qgg archive |
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