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phers: Calculate Phenotype Risk Scores

Use phenotype risk scores based on linked clinical and genetic data to study Mendelian disease and rare genetic variants. See Bastarache et al. 2018 <doi:10.1126/science.aal4043>.

Version: 1.0.2
Depends: R (≥ 3.5)
Imports: BEDMatrix (≥ 2.0.3), checkmate (≥ 2.0.0), data.table (≥ 1.5.0), foreach (≥ 1.5.2), iterators (≥ 1.0.14), survival (≥ 3.3.1)
Suggests: doParallel (≥ 1.0.17), knitr, rmarkdown, testthat (≥ 3.1.0), qs (≥ 0.25.2)
Published: 2023-03-26
DOI: 10.32614/CRAN.package.phers
Author: Jake Hughey [aut, cre], Layla Aref [aut]
Maintainer: Jake Hughey <jakejhughey at gmail.com>
License: GPL-2
URL: https://phers.hugheylab.org, https://github.com/hugheylab/phers
NeedsCompilation: no
Materials: NEWS
CRAN checks: phers results

Documentation:

Reference manual: phers.pdf

Downloads:

Package source: phers_1.0.2.tar.gz
Windows binaries: r-devel: phers_1.0.2.zip, r-release: phers_1.0.2.zip, r-oldrel: phers_1.0.2.zip
macOS binaries: r-release (arm64): phers_1.0.2.tgz, r-oldrel (arm64): phers_1.0.2.tgz, r-release (x86_64): phers_1.0.2.tgz, r-oldrel (x86_64): phers_1.0.2.tgz
Old sources: phers archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=phers to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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