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A collection of functions for modelling mutations in pedigrees with marker data, as used e.g. in likelihood computations with microsatellite data. Implemented models include equal, proportional and stepwise models, as well as random models for experimental work, and custom models allowing the user to apply any valid mutation matrix. Allele lumping is done following the lumpability criteria of Kemeny and Snell (1976), ISBN:0387901922.
Version: | 0.7.1 |
Depends: | R (≥ 4.1.0) |
Suggests: | testthat |
Published: | 2023-11-05 |
DOI: | 10.32614/CRAN.package.pedmut |
Author: | Magnus Dehli Vigeland
|
Maintainer: | Magnus Dehli Vigeland <m.d.vigeland at medisin.uio.no> |
License: | GPL-3 |
URL: | https://github.com/magnusdv/pedmut |
NeedsCompilation: | no |
Language: | en-GB |
Materials: | README NEWS |
CRAN checks: | pedmut results |
Reference manual: | pedmut.pdf |
Package source: | pedmut_0.7.1.tar.gz |
Windows binaries: | r-devel: pedmut_0.7.1.zip, r-release: pedmut_0.7.1.zip, r-oldrel: pedmut_0.7.1.zip |
macOS binaries: | r-release (arm64): pedmut_0.7.1.tgz, r-oldrel (arm64): pedmut_0.7.1.tgz, r-release (x86_64): pedmut_0.7.1.tgz, r-oldrel (x86_64): pedmut_0.7.1.tgz |
Old sources: | pedmut archive |
Reverse imports: | KLINK, pedbuildr, pedFamilias, pedprobr, pedsuite, pedtools |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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