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Implements the pcgen algorithm, which is a modified version of the standard pc-algorithm, with specific conditional independence tests and modified orientation rules. pcgen extends the approach of Valente et al. (2010) <doi:10.1534/genetics.109.112979> with reconstruction of direct genetic effects.
Version: | 0.2.0 |
Depends: | R (≥ 3.1.0) |
Imports: | pcalg, graph, Matrix, stats, MASS, utils, Hmisc, methods, lme4, sommer, ggm |
Published: | 2019-02-18 |
DOI: | 10.32614/CRAN.package.pcgen |
Author: | Willem Kruijer, Pariya Behrouzi, Maria Xose Rodriguez-Alvarez |
Maintainer: | Pariya Behrouzi <pariya.behrouzi at gmail.com> |
License: | GPL-3 |
NeedsCompilation: | no |
CRAN checks: | pcgen results |
Reference manual: | pcgen.pdf |
Package source: | pcgen_0.2.0.tar.gz |
Windows binaries: | r-devel: pcgen_0.2.0.zip, r-release: pcgen_0.2.0.zip, r-oldrel: pcgen_0.2.0.zip |
macOS binaries: | r-release (arm64): pcgen_0.2.0.tgz, r-oldrel (arm64): pcgen_0.2.0.tgz, r-release (x86_64): pcgen_0.2.0.tgz, r-oldrel (x86_64): pcgen_0.2.0.tgz |
Old sources: | pcgen archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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