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medicalrisk: Medical Risk and Comorbidity Tools for ICD-9-CM Data

Generates risk estimates and comorbidity flags from ICD-9-CM codes available in administrative medical datasets. The package supports the Charlson Comorbidity Index, the Elixhauser Comorbidity classification, the Revised Cardiac Risk Index, and the Risk Stratification Index. Methods are table-based, fast, and use the 'plyr' package, so parallelization is possible for large jobs. Also includes a sample of real ICD-9 data for 100 patients from a publicly available dataset.

Version: 1.3
Depends: R (≥ 3.0.0)
Imports: plyr (≥ 1.5), reshape2, hash
Suggests: testthat, knitr, ggplot2, gridExtra
Published: 2020-02-29
Author: Patrick McCormick [aut, cre], Thomas Joseph [aut]
Maintainer: Patrick McCormick <patrick.mccormick at alum.mit.edu>
BugReports: https://github.com/patrickmdnet/medicalrisk/issues
License: GPL-3 | file LICENSE
URL: https://github.com/patrickmdnet/medicalrisk
NeedsCompilation: no
Materials: README NEWS
CRAN checks: medicalrisk results

Documentation:

Reference manual: medicalrisk.pdf
Vignettes: medicalrisk: Correlating ICU days with mortality risk and comorbidities
medicalrisk: Calculating risk and comorbidities from ICD-9-CM codes

Downloads:

Package source: medicalrisk_1.3.tar.gz
Windows binaries: r-devel: medicalrisk_1.3.zip, r-release: medicalrisk_1.3.zip, r-oldrel: medicalrisk_1.3.zip
macOS binaries: r-release (arm64): medicalrisk_1.3.tgz, r-oldrel (arm64): medicalrisk_1.3.tgz, r-release (x86_64): medicalrisk_1.3.tgz, r-oldrel (x86_64): medicalrisk_1.3.tgz
Old sources: medicalrisk archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.