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Tools for estimating incidence from biomarker data in cross- sectional surveys, and for calibrating tests for recent infection. Implements and extends the method of Kassanjee et al. (2012) <doi:10.1097/EDE.0b013e3182576c07>.
| Version: | 1.0.15 |
| Depends: | R (≥ 3.4.0) |
| Imports: | stats, utils, magrittr, rlang, dplyr, tibble, cubature, tmvtnorm, ggplot2, glm2, plyr, pracma, foreach, parallel, doParallel, binom |
| Suggests: | survey, knitr, rmarkdown |
| Published: | 2019-11-07 |
| DOI: | 10.32614/CRAN.package.inctools |
| Author: | Eduard Grebe [cre, aut], Alex Welte [aut], Avery McIntosh [aut], Petra Bäumler [aut], Reshma Kassanjee [ctb], Hilmarie Brand [ctb], Cari Van Schalkwyk [ctb], Yuruo Li [ctb], Simon Daniel [ctb], Stefano Ongarello [aut], Yusuke Asai [ctb], Jeffrey Eaton [ctb] |
| Maintainer: | Eduard Grebe <Eduard.Grebe at ucsf.edu> |
| BugReports: | https://github.com/SACEMA/inctools/issues |
| License: | GPL-3 |
| URL: | http://www.incidence-estimation.org/page/inctools |
| NeedsCompilation: | no |
| In views: | Epidemiology |
| CRAN checks: | inctools results |
| Reference manual: | inctools.pdf |
| Vignettes: |
Estimating incidence Overview of inctools Survey design Test calibration |
| Package source: | inctools_1.0.15.tar.gz |
| Windows binaries: | r-devel: inctools_1.0.15.zip, r-release: inctools_1.0.15.zip, r-oldrel: inctools_1.0.15.zip |
| macOS binaries: | r-release (arm64): inctools_1.0.15.tgz, r-oldrel (arm64): inctools_1.0.15.tgz, r-release (x86_64): inctools_1.0.15.tgz, r-oldrel (x86_64): inctools_1.0.15.tgz |
| Old sources: | inctools archive |
Please use the canonical form https://CRAN.R-project.org/package=inctools to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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