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grantham: Calculate the Grantham Distance
A minimal set of routines to calculate the Grantham distance
<doi:10.1126/science.185.4154.862>. The Grantham distance attempts to
provide a proxy for the evolutionary distance between two amino acids
based on three key chemical properties: composition, polarity and
molecular volume. In turn, evolutionary distance is used as a proxy for
the impact of missense mutations. The higher the distance, the more
deleterious the substitution is expected to be.
| Version: |
0.1.2 |
| Depends: |
R (≥ 2.10) |
| Imports: |
tibble, vctrs, dplyr |
| Suggests: |
spelling, testthat (≥ 3.0.0) |
| Published: |
2024-07-30 |
| DOI: |
10.32614/CRAN.package.grantham |
| Author: |
Ramiro Magno 
[aut, cre],
Isabel Duarte
[aut],
Ana-Teresa Maia
[aut],
University of Algarve [fnd],
CINTESIS [fnd],
Pattern Institute [cph, fnd] |
| Maintainer: |
Ramiro Magno <rmagno at pattern.institute> |
| BugReports: |
https://github.com/patterninstitute/grantham/issues |
| License: |
MIT + file LICENSE |
| URL: |
https://www.pattern.institute/grantham/,
https://github.com/patterninstitute/grantham |
| NeedsCompilation: |
no |
| Language: |
en-US |
| Materials: |
README NEWS |
| CRAN checks: |
grantham results |
Documentation:
Downloads:
Reverse dependencies:
Linking:
Please use the canonical form
https://CRAN.R-project.org/package=grantham
to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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