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Wrapper functions that interface with 'Freesurfer' <https://surfer.nmr.mgh.harvard.edu/>, a powerful and commonly-used 'neuroimaging' software, using system commands. The goal is to be able to interface with 'Freesurfer' completely in R, where you pass R objects of class 'nifti', implemented by package 'oro.nifti', and the function executes an 'Freesurfer' command and returns an R object of class 'nifti' or necessary output.
Version: | 1.6.10 |
Depends: | R (≥ 3.2.0) |
Imports: | methods, neurobase, tools, R.utils, reshape2, utils |
Suggests: | magrittr, knitr, oro.nifti (≥ 0.7), rgl, rmarkdown, pander, fslr (≥ 2.9.2) |
Published: | 2024-05-14 |
DOI: | 10.32614/CRAN.package.freesurfer |
Author: | John Muschelli [aut, cre], Athanasia Mo Mowinckel [ctb] |
Maintainer: | John Muschelli <muschellij2 at gmail.com> |
BugReports: | https://github.com/muschellij2/freesurfer/issues |
License: | GPL-3 |
NeedsCompilation: | no |
SystemRequirements: | FSL, Freesurfer (https://surfer.nmr.mgh.harvard.edu/) |
Citation: | freesurfer citation info |
Materials: | README NEWS |
CRAN checks: | freesurfer results |
Reference manual: | freesurfer.pdf |
Vignettes: |
Exploring Included Subject Freesurfer Data |
Package source: | freesurfer_1.6.10.tar.gz |
Windows binaries: | r-devel: freesurfer_1.6.10.zip, r-release: freesurfer_1.6.10.zip, r-oldrel: freesurfer_1.6.10.zip |
macOS binaries: | r-release (arm64): freesurfer_1.6.10.tgz, r-oldrel (arm64): freesurfer_1.6.10.tgz, r-release (x86_64): freesurfer_1.6.10.tgz, r-oldrel (x86_64): freesurfer_1.6.10.tgz |
Old sources: | freesurfer archive |
Please use the canonical form https://CRAN.R-project.org/package=freesurfer to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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