The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.

corehunter: Multi-Purpose Core Subset Selection

Core Hunter is a tool to sample diverse, representative subsets from large germplasm collections, with minimum redundancy. Such so-called core collections have applications in plant breeding and genetic resource management in general. Core Hunter can construct cores based on genetic marker data, phenotypic traits or precomputed distance matrices, optimizing one of many provided evaluation measures depending on the precise purpose of the core (e.g. high diversity, representativeness, or allelic richness). In addition, multiple measures can be simultaneously optimized as part of a weighted index to bring the different perspectives closer together. The Core Hunter library is implemented in Java 8 as an open source project (see <http://www.corehunter.org>).

Version: 3.2.3
Depends: R (≥ 3.2.3), rJava (≥ 0.9-8)
Imports: naturalsort (≥ 0.1.2), methods
Suggests: testthat, mockr, StatMatch
Published: 2023-09-01
DOI: 10.32614/CRAN.package.corehunter
Author: Herman De Beukelaer [aut, cre], Guy Davenport [aut], Veerle Fack [ths]
Maintainer: Herman De Beukelaer <herman.debeukelaer at gmail.com>
License: MIT + file LICENSE
NeedsCompilation: no
SystemRequirements: Java (>= 8)
Materials: README NEWS
CRAN checks: corehunter results

Documentation:

Reference manual: corehunter.pdf

Downloads:

Package source: corehunter_3.2.3.tar.gz
Windows binaries: r-devel: corehunter_3.2.3.zip, r-release: corehunter_3.2.3.zip, r-oldrel: corehunter_3.2.3.zip
macOS binaries: r-release (arm64): corehunter_3.2.3.tgz, r-oldrel (arm64): corehunter_3.2.3.tgz, r-release (x86_64): corehunter_3.2.3.tgz, r-oldrel (x86_64): corehunter_3.2.3.tgz
Old sources: corehunter archive

Reverse dependencies:

Reverse suggests: EvaluateCore

Linking:

Please use the canonical form https://CRAN.R-project.org/package=corehunter to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.