The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.

banffIT: Automated Standardized Assignment of the Banff Classification

Assigns standardized diagnoses using the Banff Classification (Category 1 to 6 diagnoses, including Acute and Chronic active T-cell mediated rejection as well as Active, Chronic active, and Chronic antibody mediated rejection). The main function considers a minimal dataset containing biopsies information in a specific format (described by a data dictionary), verifies its content and format (based on the data dictionary), assigns diagnoses, and creates a summary report. The package is developed on the reference guide to the Banff classification of renal allograft pathology Roufosse C, Simmonds N, Clahsen-van Groningen M, et al. A (2018) <doi:10.1097/TP.0000000000002366>. The full description of the Banff classification is available at <https://banfffoundation.org/>.

Version: 2.0.0
Depends: R (≥ 3.4)
Imports: dplyr (≥ 1.1.0), rlang, tools, utils, crayon, stringr, fs, lubridate, tidyr, fabR, madshapR (≥ 2.0.0)
Suggests: knitr, rmarkdown, usethis
Published: 2025-07-05
DOI: 10.32614/CRAN.package.banffIT
Author: Guillaume Fabre ORCID iD [aut, cre], Ruth Sapir-Pichhadze [fnd, cph, ctb], Jan Ulrich Becker [ctb], Samuel El Bouzaïdi Tiali [ctb], Jérôme Laforme [ctb], Tina Wey [ctb], Edden Gitelman [ctb]
Maintainer: Guillaume Fabre <guijoseph.fabre at gmail.com>
BugReports: https://github.com/PersonalizedTransplantCare/banffIT/issues
License: GPL-3
URL: https://github.com/PersonalizedTransplantCare/banffIT
NeedsCompilation: no
Language: en-US
Materials: README NEWS
CRAN checks: banffIT results

Documentation:

Reference manual: banffIT.pdf
Vignettes: banffIT-vignette (source, R code)

Downloads:

Package source: banffIT_2.0.0.tar.gz
Windows binaries: r-devel: banffIT_1.0.0.zip, r-release: banffIT_2.0.0.zip, r-oldrel: banffIT_2.0.0.zip
macOS binaries: r-release (arm64): banffIT_2.0.0.tgz, r-oldrel (arm64): banffIT_2.0.0.tgz, r-release (x86_64): banffIT_2.0.0.tgz, r-oldrel (x86_64): banffIT_2.0.0.tgz
Old sources: banffIT archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=banffIT to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.