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Provides functions to run statistical analyses on surface-based neuroimaging data, computing measures including cortical thickness and surface area of the whole-brain and of the hippocampi. It can make use of 'FreeSurfer' preprocessed datasets and 'HippUnfold' hippocampal segmentation outputs for a given sample by restructuring the data values into a single file. The single file can then be used by the package for analyses independently from its base dataset and without need for its access.
Version: | 1.0.0 |
Depends: | R (≥ 4.0.0) |
Imports: | doParallel, doSNOW, foreach, freesurferformats, fs, gifti, grDevices, igraph, methods, reticulate, stats, utils |
Published: | 2024-06-13 |
DOI: | 10.32614/CRAN.package.VertexWiseR |
Author: | Junhong Yu |
Maintainer: | Charly Billaud <charly.billaud at ntu.edu.sg> |
License: | GPL-3 |
URL: | https://cogbrainhealthlab.github.io/VertexWiseR/ |
NeedsCompilation: | no |
SystemRequirements: | Miniconda3 (>= 23.10.0); BrainStat (reticulate installation, >=0.4.2) |
Materials: | README |
CRAN checks: | VertexWiseR results |
Reference manual: | VertexWiseR.pdf |
Package source: | VertexWiseR_1.0.0.tar.gz |
Windows binaries: | r-devel: VertexWiseR_1.0.0.zip, r-release: VertexWiseR_1.0.0.zip, r-oldrel: VertexWiseR_1.0.0.zip |
macOS binaries: | r-release (arm64): VertexWiseR_1.0.0.tgz, r-oldrel (arm64): VertexWiseR_1.0.0.tgz, r-release (x86_64): VertexWiseR_1.0.0.tgz, r-oldrel (x86_64): VertexWiseR_1.0.0.tgz |
Please use the canonical form https://CRAN.R-project.org/package=VertexWiseR to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.