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SpoMAG: Probability of Sporulation Potential in MAGs
Implements an ensemble machine learning approach to predict the sporulation potential of metagenome-assembled genomes (MAGs) from uncultivated Firmicutes based on the presence/absence of sporulation-associated genes.
| Version: |
0.1.0 |
| Depends: |
R (≥ 3.5.0) |
| Imports: |
dplyr, tidyr, tibble, stats |
| Suggests: |
testthat (≥ 3.0.0), caret, kernlab, randomForest, readr |
| Published: |
2025-05-29 |
| DOI: |
10.32614/CRAN.package.SpoMAG |
| Author: |
Douglas Terra Machado
 [aut, cre],
Otávio José Bernardes Brustolini
[ctb],
Ellen dos Santos Corrêa [ctb],
Ana Tereza Ribeiro Vasconcelos
[ctb] |
| Maintainer: |
Douglas Terra Machado <dougterra at gmail.com> |
| License: |
Artistic-2.0 |
| NeedsCompilation: |
no |
| Materials: |
README |
| CRAN checks: |
SpoMAG results |
Documentation:
Downloads:
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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