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ProbeDeveloper: Develop Hybridization Probes

Hybridization probes for target sequences can be made based on melting temperature value calculated by R package 'TmCalculator' <https://CRAN.R-project.org/package=TmCalculator> and methods extended from Beliveau, B. J.,(2018) <doi:10.1073/pnas.1714530115>, and those hybridization probes can be used to capture specific target regions in fluorescence in situ hybridization and next generation sequence experiments.

Version: 1.1.0
Depends: R (≥ 2.10)
Imports: TmCalculator (≥ 1.0.2), Biostrings (≥ 2.12.0)
Published: 2022-01-31
DOI: 10.32614/CRAN.package.ProbeDeveloper
Author: Junhui Li
Maintainer: Junhui Li <junhuili at cau.edu.cn>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
CRAN checks: ProbeDeveloper results

Documentation:

Reference manual: ProbeDeveloper.pdf

Downloads:

Package source: ProbeDeveloper_1.1.0.tar.gz
Windows binaries: r-devel: ProbeDeveloper_1.1.0.zip, r-release: ProbeDeveloper_1.1.0.zip, r-oldrel: ProbeDeveloper_1.1.0.zip
macOS binaries: r-release (arm64): ProbeDeveloper_1.1.0.tgz, r-oldrel (arm64): ProbeDeveloper_1.1.0.tgz, r-release (x86_64): ProbeDeveloper_1.1.0.tgz, r-oldrel (x86_64): ProbeDeveloper_1.1.0.tgz
Old sources: ProbeDeveloper archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=ProbeDeveloper to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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