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Provide functionality for cancer subtyping using nearest centroids or machine learning methods based on TCGA data.
Version: | 1.0.0 |
Depends: | SummarizedExperiment, R (≥ 3.63) |
Imports: | caret, randomForest, methods, e1071, pheatmap, tibble, dplyr, limma, rlang, Rdpack |
Suggests: | knitr, rmarkdown, testthat (≥ 3.0.0) |
Published: | 2024-03-22 |
DOI: | 10.32614/CRAN.package.OncoSubtype |
Author: | Dadong Zhang |
Maintainer: | Dadong Zhang <dadong.zhang.shared at gmail.com> |
BugReports: | https://github.com/DadongZ/OncoSubtype/issues |
License: | GPL-3 |
URL: | https://github.com/DadongZ/OncoSubtype |
NeedsCompilation: | no |
Materials: | README |
CRAN checks: | OncoSubtype results |
Reference manual: | OncoSubtype.pdf |
Vignettes: |
OncoSubtype |
Package source: | OncoSubtype_1.0.0.tar.gz |
Windows binaries: | r-devel: OncoSubtype_1.0.0.zip, r-release: OncoSubtype_1.0.0.zip, r-oldrel: OncoSubtype_1.0.0.zip |
macOS binaries: | r-release (arm64): OncoSubtype_1.0.0.tgz, r-oldrel (arm64): OncoSubtype_1.0.0.tgz, r-release (x86_64): OncoSubtype_1.0.0.tgz, r-oldrel (x86_64): OncoSubtype_1.0.0.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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