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NPflow: Bayesian Nonparametrics for Automatic Gating of Flow-Cytometry Data

Dirichlet process mixture of multivariate normal, skew normal or skew t-distributions modeling oriented towards flow-cytometry data preprocessing applications. Method is detailed in: Hejblum, Alkhassimn, Gottardo, Caron & Thiebaut (2019) <doi:10.1214/18-AOAS1209>.

Version: 0.13.5
Depends: R (≥ 3.1), Rcpp (≥ 0.12.11), truncnorm
Imports: graphics, stats, grDevices, ellipse, fastcluster, ggplot2, pheatmap, reshape2, GGally
LinkingTo: Rcpp, RcppArmadillo
Suggests: foreach, parallel, doParallel, itertools, microbenchmark
Published: 2024-01-13
Author: Boris P Hejblum [aut, cre], Chariff Alkhassim [aut], Francois Caron [aut]
Maintainer: Boris P Hejblum <boris.hejblum at u-bordeaux.fr>
BugReports: https://github.com/sistm/NPflow/issues
License: LGPL-3 | file LICENSE
NeedsCompilation: yes
Citation: NPflow citation info
Materials: README NEWS
In views: Cluster
CRAN checks: NPflow results

Documentation:

Reference manual: NPflow.pdf

Downloads:

Package source: NPflow_0.13.5.tar.gz
Windows binaries: r-devel: NPflow_0.13.5.zip, r-release: NPflow_0.13.5.zip, r-oldrel: NPflow_0.13.5.zip
macOS binaries: r-release (arm64): NPflow_0.13.5.tgz, r-oldrel (arm64): NPflow_0.13.5.tgz, r-release (x86_64): NPflow_0.13.5.tgz, r-oldrel (x86_64): NPflow_0.13.5.tgz
Old sources: NPflow archive

Reverse dependencies:

Reverse imports: bqror

Linking:

Please use the canonical form https://CRAN.R-project.org/package=NPflow to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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