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The 'MetAlyzer' S4 object provides methods to read and reformat metabolomics data for convenient data handling, statistics and downstream analysis. The resulting format corresponds to input data of the Shiny app 'MetaboExtract' (<https://www.metaboextract.shiny.dkfz.de/MetaboExtract/>).
Version: | 1.0.0 |
Depends: | R (≥ 4.0.0) |
Imports: | SummarizedExperiment, openxlsx, stringr, dplyr, tidyr, tibble, agricolae, ggplot2, ggrepel, utils, rlang, methods, data.table, S4Vectors, qvalue |
Suggests: | rmarkdown, knitr |
Published: | 2024-03-13 |
DOI: | 10.32614/CRAN.package.MetAlyzer |
Author: | Nils Mechtel |
Maintainer: | Nils Mechtel <nils.mech at gmail.com> |
BugReports: | https://github.com/nilsmechtel/MetAlyzer/issues |
License: | GPL-3 |
URL: | https://github.com/nilsmechtel/MetAlyzer |
NeedsCompilation: | no |
Language: | en-US |
Materials: | README NEWS |
CRAN checks: | MetAlyzer results |
Reference manual: | MetAlyzer.pdf |
Vignettes: |
Read and Analyze MetIDQ™ Software Output Files |
Package source: | MetAlyzer_1.0.0.tar.gz |
Windows binaries: | r-devel: MetAlyzer_1.0.0.zip, r-release: MetAlyzer_1.0.0.zip, r-oldrel: MetAlyzer_1.0.0.zip |
macOS binaries: | r-release (arm64): MetAlyzer_1.0.0.tgz, r-oldrel (arm64): MetAlyzer_1.0.0.tgz, r-release (x86_64): MetAlyzer_1.0.0.tgz, r-oldrel (x86_64): MetAlyzer_1.0.0.tgz |
Old sources: | MetAlyzer archive |
Please use the canonical form https://CRAN.R-project.org/package=MetAlyzer to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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