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MetAlyzer: Read and Analyze 'MetIDQ™' Software Output Files

The 'MetAlyzer' S4 object provides methods to read and reformat metabolomics data for convenient data handling, statistics and downstream analysis. The resulting format corresponds to input data of the Shiny app 'MetaboExtract' (<https://www.metaboextract.shiny.dkfz.de/MetaboExtract/>).

Version: 1.1.0
Depends: R (≥ 4.0.0)
Imports: SummarizedExperiment, openxlsx, stringr, dplyr, tidyr, tibble, agricolae, ggplot2, ggrepel, utils, rlang, data.table, S4Vectors, viridis, viridisLite, plotly, limma
Suggests: rmarkdown, knitr
Published: 2024-12-06
DOI: 10.32614/CRAN.package.MetAlyzer
Author: Nils Mechtel ORCID iD [aut, cre], Luis Herfurth ORCID iD [aut], Carolin Andresen ORCID iD [aut], Daniel Huebschmann ORCID iD [aut]
Maintainer: Nils Mechtel <nils.mech at gmail.com>
BugReports: https://github.com/nilsmechtel/MetAlyzer/issues
License: GPL-3
URL: https://github.com/nilsmechtel/MetAlyzer
NeedsCompilation: no
Language: en-US
Materials: README NEWS
CRAN checks: MetAlyzer results

Documentation:

Reference manual: MetAlyzer.pdf
Vignettes: Read and Analyze MetIDQ&trade; Software Output Files (source, R code)

Downloads:

Package source: MetAlyzer_1.1.0.tar.gz
Windows binaries: r-devel: MetAlyzer_1.1.0.zip, r-release: MetAlyzer_1.1.0.zip, r-oldrel: MetAlyzer_1.1.0.zip
macOS binaries: r-release (arm64): MetAlyzer_1.1.0.tgz, r-oldrel (arm64): MetAlyzer_1.1.0.tgz, r-release (x86_64): MetAlyzer_1.1.0.tgz, r-oldrel (x86_64): MetAlyzer_1.1.0.tgz
Old sources: MetAlyzer archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=MetAlyzer to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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