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KODAMA: Knowledge Discovery by Accuracy Maximization

A self-guided, weakly supervised learning algorithm for feature extraction from noisy and high-dimensional data. It facilitates the identification of patterns that reflect underlying group structures across all samples in a dataset. The method incorporates a novel strategy to integrate spatial information, improving the interpretability of results in spatially resolved data.

Version: 3.0
Depends: R (≥ 2.10.0), stats, Rtsne, umap
Imports: Rcpp (≥ 0.12.4), Rnanoflann, methods, Matrix
LinkingTo: Rcpp, RcppArmadillo, Rnanoflann, Matrix
Suggests: rgl, knitr, rmarkdown
Published: 2025-06-03
DOI: 10.32614/CRAN.package.KODAMA
Author: Stefano Cacciatore ORCID iD [aut, trl, cre], Leonardo Tenori ORCID iD [aut]
Maintainer: Stefano Cacciatore <tkcaccia at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
Materials: README
CRAN checks: KODAMA results

Documentation:

Reference manual: KODAMA.pdf
Vignettes: Knowledge Discovery by Accuracy Maximization (source)

Downloads:

Package source: KODAMA_3.0.tar.gz
Windows binaries: r-devel: KODAMA_3.0.zip, r-release: KODAMA_3.0.zip, r-oldrel: KODAMA_3.0.zip
macOS binaries: r-release (arm64): KODAMA_3.0.tgz, r-oldrel (arm64): KODAMA_3.0.tgz, r-release (x86_64): KODAMA_3.0.tgz, r-oldrel (x86_64): KODAMA_3.0.tgz
Old sources: KODAMA archive

Reverse dependencies:

Reverse depends: MetChem

Linking:

Please use the canonical form https://CRAN.R-project.org/package=KODAMA to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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