IDSL.FSA: Fragmentation Spectra Analysis (FSA)

The 'IDSL.FSA' package was designed to annotate standard .msp (mass spectra format) and .mgf (Mascot generic format) files using mass spectral entropy similarity, dot product (cosine) similarity, and normalized Euclidean mass error (NEME) followed by intelligent pre-filtering steps for rapid spectra searches. 'IDSL.FSA' also provides a number of modules to convert and manipulate .msp and .mgf files. The 'IDSL.FSA' workflow was integrated in the 'IDSL.CSA' and 'IDSL.NPA' packages introduced in <doi:10.1021/acs.analchem.3c00376>.

Version:	1.2
Depends:	R (≥ 4.0)
Suggests:	readxl
Published:	2023-06-29
DOI:	10.32614/CRAN.package.IDSL.FSA
Author:	Sadjad Fakouri-Baygi [aut], Dinesh Barupal [cre, aut]
Maintainer:	Dinesh Barupal <dinesh.barupal at mssm.edu>
BugReports:	https://github.com/idslme/idsl.fsa/issues
License:	MIT + file LICENSE
URL:	https://github.com/idslme/idsl.fsa
NeedsCompilation:	no
Citation:	IDSL.FSA citation info
CRAN checks:	IDSL.FSA results

Documentation:

Reference manual:

IDSL.FSA.pdf

Downloads:

Package source:	IDSL.FSA_1.2.tar.gz
Windows binaries:	r-devel: IDSL.FSA_1.2.zip, r-release: IDSL.FSA_1.2.zip, r-oldrel: IDSL.FSA_1.2.zip
macOS binaries:	r-release (arm64): IDSL.FSA_1.2.tgz, r-oldrel (arm64): IDSL.FSA_1.2.tgz, r-release (x86_64): IDSL.FSA_1.2.tgz, r-oldrel (x86_64): IDSL.FSA_1.2.tgz
Old sources:	IDSL.FSA archive

Reverse dependencies:

Reverse imports:

IDSL.CSA, IDSL.NPA

Linking:

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