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GGIR: Raw Accelerometer Data Analysis

A tool to process and analyse data collected with wearable raw acceleration sensors as described in Migueles and colleagues (JMPB 2019), and van Hees and colleagues (JApplPhysiol 2014; PLoSONE 2015). The package has been developed and tested for binary data from 'GENEActiv' <https://activinsights.com/>, binary (.gt3x) and .csv-export data from 'Actigraph' <https://theactigraph.com> devices, and binary (.cwa) and .csv-export data from 'Axivity' <https://axivity.com>. These devices are currently widely used in research on human daily physical activity. Further, the package can handle accelerometer data file from any other sensor brand providing that the data is stored in csv format. Also the package allows for external function embedding.

Version: 3.1-5
Depends: stats, utils, R (≥ 3.5)
Imports: data.table, foreach, doParallel, signal, zoo, unisensR, ineq, methods, psych, irr, lubridate, GGIRread, ActCR, read.gt3x
Suggests: testthat, covr, knitr, rmarkdown, actilifecounts, readxl
Published: 2024-11-07
DOI: 10.32614/CRAN.package.GGIR
Author: Vincent T van Hees [aut, cre], Jairo H Migueles ORCID iD [aut], Severine Sabia [ctb], Matthew R Patterson [ctb], Zhou Fang [ctb], Joe Heywood [ctb], Joan Capdevila Pujol [ctb], Lena Kushleyeva [ctb], Mathilde Chen [ctb], Manasa Yerramalla [ctb], Patrick Bos ORCID iD [ctb], Taren Sanders [ctb], Chenxuan Zhao [ctb], Gaia Segantin [ctb], Medical Research Council UK [cph, fnd], Accelting [cph, fnd], French National Research Agency [cph, fnd]
Maintainer: Vincent T van Hees <v.vanhees at accelting.com>
BugReports: https://github.com/wadpac/GGIR/issues
License: Apache License (== 2.0) | file LICENSE
URL: https://github.com/wadpac/GGIR/, https://groups.google.com/forum/#!forum/RpackageGGIR, https://wadpac.github.io/GGIR/
NeedsCompilation: no
Citation: GGIR citation info
Materials: README NEWS
In views: Tracking
CRAN checks: GGIR results

Documentation:

Reference manual: GGIR.pdf
Vignettes: Published cut-points and how to use them in GGIR (source)
Embedding external functions in GGIR (source, R code)
Accelerometer data processing with GGIR (source, R code)
GGIR configuration parameters (source, R code)
GGIR output (source, R code)
Day segment analyses with GGIR (source, R code)
Reading csv files with raw data in GGIR (source, R code)

Downloads:

Package source: GGIR_3.1-5.tar.gz
Windows binaries: r-devel: GGIR_3.1-5.zip, r-release: GGIR_3.1-5.zip, r-oldrel: GGIR_3.1-5.zip
macOS binaries: r-release (arm64): GGIR_3.1-5.tgz, r-oldrel (arm64): GGIR_3.1-5.tgz, r-release (x86_64): GGIR_3.1-5.tgz, r-oldrel (x86_64): GGIR_3.1-5.tgz
Old sources: GGIR archive

Reverse dependencies:

Reverse imports: agcounts, mMARCH.AC, postGGIR

Linking:

Please use the canonical form https://CRAN.R-project.org/package=GGIR to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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