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DBTC: Dada-BLAST-Taxon Assign-Condense Metabarcode Analysis
First using 'dada2' R tools to analyse metabarcode data, the 'DBTC' package then uses the BLAST algorithm to search unknown sequences against local databases, and then takes reduced matched results and provides best taxonomic assignments.
| Version: |
0.1.0 |
| Imports: |
dada2, ggplot2, parallel, pbapply, plyr, ShortRead, stats, taxonomizr, utils |
| Published: |
2024-04-27 |
| DOI: |
10.32614/CRAN.package.DBTC |
| Author: |
Robert G Young 
[aut, cre, cph] |
| Maintainer: |
Robert G Young <rgyoung6 at gmail.com> |
| License: |
GPL-2 | GPL-3 |
| URL: |
<https://github.com/rgyoung6/DBTC> |
| NeedsCompilation: |
no |
| Language: |
en-GB |
| Materials: |
README |
| CRAN checks: |
DBTC results |
Documentation:
Downloads:
Reverse dependencies:
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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