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Implement in 'R' interactive Circos-like visualizations of genomic data, to map information such as genetic variants, genomic fusions and aberrations to a circular genome, as proposed by the 'JavaScript' library 'BioCircos.js', based on the 'JQuery' and 'D3' technologies. The output is by default displayed in stand-alone HTML documents or in the 'RStudio' viewer pane. Moreover it can be integrated in 'R Markdown' documents and 'Shiny' applications.
Version: | 0.3.4 |
Depends: | R (≥ 3.1.0) |
Imports: | RColorBrewer, htmlwidgets, jsonlite, plyr, grDevices |
Suggests: | knitr, rmarkdown |
Published: | 2019-03-19 |
DOI: | 10.32614/CRAN.package.BioCircos |
Author: | Loan Vulliard [trl, cre], Xiaowei Chen [aut], Ya Cui [aut] |
Maintainer: | Loan Vulliard <lvulliard at cemm.at> |
License: | GPL-2 | file LICENSE |
URL: | https://github.com/lvulliard/BioCircos.R |
NeedsCompilation: | no |
Materials: | README |
CRAN checks: | BioCircos results |
Reference manual: | BioCircos.pdf |
Vignettes: |
BioCircos: Generating circular multi-track plots |
Package source: | BioCircos_0.3.4.tar.gz |
Windows binaries: | r-devel: BioCircos_0.3.4.zip, r-release: BioCircos_0.3.4.zip, r-oldrel: BioCircos_0.3.4.zip |
macOS binaries: | r-release (arm64): BioCircos_0.3.4.tgz, r-oldrel (arm64): BioCircos_0.3.4.tgz, r-release (x86_64): BioCircos_0.3.4.tgz, r-oldrel (x86_64): BioCircos_0.3.4.tgz |
Old sources: | BioCircos archive |
Please use the canonical form https://CRAN.R-project.org/package=BioCircos to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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