CRAN Package Check Results for Maintainer ‘Zhang Renliang <zhang_renliang at 163.com>’

Last updated on 2025-10-10 11:51:51 CEST.

Package	ERROR	OK
geneHapR	4	9
lolliplot		13

Package geneHapR

Current CRAN status: ERROR: 4, OK: 9

Version: 1.2.4
Check: examples
Result: ERROR Running examples in ‘geneHapR-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: LDheatmap > ### Title: This function produces a pairwise LD plot. > ### Aliases: LDheatmap plot_LDheatmap > > ### ** Examples > > # Pass LDheatmap a SnpMatrix object > data(geneHapR_test) > plot_LDheatmap(hap = hapResult, + gff = gff, + Chr = hapResult[1,2], + start = 4000, end = 8200) Warning in LDheatmap(gdat, gff = gff, Chr = Chr, start = start, end = end, : Only bi-alleles supported,Variables with less or more than 2 allels will be omitted. Loading required namespace: GenomeInfoDb Failed with error: ‘there is no package called ‘GenomeInfoDb’’ Error in h(simpleError(msg, call)) : error in evaluating the argument 'i' in selecting a method for function '[': unable to load required package ‘GenomeInfoDb’ Calls: plot_LDheatmap ... vapply -> FUN -> is -> getClassDef -> .requirePackage Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.2.4
Check: examples
Result: ERROR Running examples in ‘geneHapR-Ex.R’ failed The error most likely occurred in: > ### Name: LDheatmap > ### Title: This function produces a pairwise LD plot. > ### Aliases: LDheatmap plot_LDheatmap > > ### ** Examples > > # Pass LDheatmap a SnpMatrix object > data(geneHapR_test) > plot_LDheatmap(hap = hapResult, + gff = gff, + Chr = hapResult[1,2], + start = 4000, end = 8200) Warning in LDheatmap(gdat, gff = gff, Chr = Chr, start = start, end = end, : Only bi-alleles supported,Variables with less or more than 2 allels will be omitted. Loading required namespace: GenomeInfoDb Failed with error: ‘there is no package called ‘GenomeInfoDb’’ Error in h(simpleError(msg, call)) : error in evaluating the argument 'i' in selecting a method for function '[': unable to load required package ‘GenomeInfoDb’ Calls: plot_LDheatmap ... vapply -> FUN -> is -> getClassDef -> .requirePackage Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64

Package lolliplot

Current CRAN status: OK: 13