Last updated on 2025-06-07 11:53:13 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.34 | 30.31 | 178.72 | 209.03 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.34 | 20.74 | 111.87 | 132.61 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.1.34 | 349.80 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.34 | 336.15 | OK | |||
| r-devel-windows-x86_64 | 1.1.34 | 38.00 | 342.00 | 380.00 | ERROR | |
| r-patched-linux-x86_64 | 1.1.34 | 33.58 | 169.63 | 203.21 | OK | |
| r-release-linux-x86_64 | 1.1.34 | 27.84 | 170.37 | 198.21 | OK | |
| r-release-macos-arm64 | 1.1.34 | 156.00 | OK | |||
| r-release-macos-x86_64 | 1.1.34 | 224.00 | OK | |||
| r-release-windows-x86_64 | 1.1.34 | 37.00 | 231.00 | 268.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.34 | 112.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 1.1.34 | 236.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 1.1.34 | 47.00 | 284.00 | 331.00 | NOTE |
Version: 1.1.34
Check: examples
Result: ERROR
Running examples in ‘warbleR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: read_wave
> ### Title: A wrapper for tuneR's readWave that read sound files listed
> ### within selection tables
> ### Aliases: read_wave
>
> ### ** Examples
>
> {
+ # write wave files with lower case file extension
+ data(list = c("Phae.long1"))
+ writeWave(Phae.long1, file.path(tempdir(), "Phae.long1.wav"))
+
+ # read from selection table
+ read_wave(X = lbh_selec_table, index = 1, path = tempdir())
+
+ # from extended selection table
+ library(NatureSounds)
+ read_wave(X = lbh.est, index = 1)
+
+ # read WAV
+ filepath <- system.file("extdata", "recording.wav", package = "bioacoustics")
+ read_wave(filepath)
+
+ # read MP3
+ filepath <- system.file("extdata", "recording.mp3", package = "bioacoustics")
+ read_wave(filepath)
+
+ # URL file
+ read_wave(X = "https://www.xeno-canto.org/513948/download")
+ }
This function is slated for deprecation in future versions. Please use the function read_sound_file() instead.
This function is slated for deprecation in future versions. Please use the function read_sound_file() instead.
This function is slated for deprecation in future versions. Please use the function read_sound_file() instead.
This function is slated for deprecation in future versions. Please use the function read_sound_file() instead.
This function is slated for deprecation in future versions. Please use the function read_sound_file() instead.
Error in curl::curl_fetch_memory(url, handle = handle) :
Timeout was reached [www.xeno-canto.org]: Connection timed out after 10017 milliseconds
Calls: read_wave ... request_fetch.write_memory -> <Anonymous> -> raise_libcurl_error
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1.34
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘a_warbleR.Rmd’ using rmarkdown
--- finished re-building ‘a_warbleR.Rmd’
--- re-building ‘b_annotation_data_format.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/warbleR.Rcheck/vign_test/warbleR/vignettes/b_annotation_data_format_files/figure-html/annotations_8.22-1.png
400x280 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33814 bytes
Input file size = 33940 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21905
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21905
Output IDAT size = 21905 bytes (11909 bytes decrease)
Output file size = 21983 bytes (11957 bytes = 35.23% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/warbleR.Rcheck/vign_test/warbleR/vignettes/b_annotation_data_format_files/figure-html/annotations_8.23-1.png
400x280 pixels, 8 bits/pixel, 141 colors in palette
Input IDAT size = 39721 bytes
Input file size = 40282 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39231
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39231
Output IDAT size = 39231 bytes (490 bytes decrease)
Output file size = 39744 bytes (538 bytes = 1.34% decrease)
Quitting from b_annotation_data_format.Rmd:536-550 [unnamed-chunk-12]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `download.file()`:
! cannot open URL 'https://xeno-canto.org/15607/download'
---
Backtrace:
▆
1. └─warbleR::query_xc(qword = "nr:15607", download = TRUE, path = tempdir())
2. └─warbleR:::.pblapply(...)
3. └─base::lapply(X, FUN, ...)
4. └─warbleR (local) FUN(X[[i]], ...)
5. └─warbleR (local) xcFUN(results, x)
6. └─utils::download.file(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'b_annotation_data_format.Rmd' failed with diagnostics:
cannot open URL 'https://xeno-canto.org/15607/download'
--- failed re-building ‘b_annotation_data_format.Rmd’
--- re-building ‘c_warbleR_workflow_02.Rmd’ using rmarkdown
--- finished re-building ‘c_warbleR_workflow_02.Rmd’
--- re-building ‘d_warbleR_workflow_03.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/warbleR.Rcheck/vign_test/warbleR/vignettes/d_warbleR_workflow_03_files/figure-html/unnamed-chunk-30-1.png
2200x1540 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 72078 bytes
Input file size = 72252 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 63781
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 63781
Output IDAT size = 63781 bytes (8297 bytes decrease)
Output file size = 63859 bytes (8393 bytes = 11.62% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/warbleR.Rcheck/vign_test/warbleR/vignettes/d_warbleR_workflow_03_files/figure-html/unnamed-chunk-31-1.png
2200x1540 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 69179 bytes
Input file size = 69353 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 60979
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 60979
Output IDAT size = 60979 bytes (8200 bytes decrease)
Output file size = 61057 bytes (8296 bytes = 11.96% decrease)
--- finished re-building ‘d_warbleR_workflow_03.Rmd’
SUMMARY: processing the following file failed:
‘b_annotation_data_format.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1.34
Check: examples
Result: ERROR
Running examples in 'warbleR-Ex.R' failed
The error most likely occurred in:
> ### Name: read_wave
> ### Title: A wrapper for tuneR's readWave that read sound files listed
> ### within selection tables
> ### Aliases: read_wave
>
> ### ** Examples
>
> {
+ # write wave files with lower case file extension
+ data(list = c("Phae.long1"))
+ writeWave(Phae.long1, file.path(tempdir(), "Phae.long1.wav"))
+
+ # read from selection table
+ read_wave(X = lbh_selec_table, index = 1, path = tempdir())
+
+ # from extended selection table
+ library(NatureSounds)
+ read_wave(X = lbh.est, index = 1)
+
+ # read WAV
+ filepath <- system.file("extdata", "recording.wav", package = "bioacoustics")
+ read_wave(filepath)
+
+ # read MP3
+ filepath <- system.file("extdata", "recording.mp3", package = "bioacoustics")
+ read_wave(filepath)
+
+ # URL file
+ read_wave(X = "https://www.xeno-canto.org/513948/download")
+ }
This function is slated for deprecation in future versions. Please use the function read_sound_file() instead.
This function is slated for deprecation in future versions. Please use the function read_sound_file() instead.
This function is slated for deprecation in future versions. Please use the function read_sound_file() instead.
This function is slated for deprecation in future versions. Please use the function read_sound_file() instead.
This function is slated for deprecation in future versions. Please use the function read_sound_file() instead.
Warning in download.file(url = X, destfile = temp.file, quiet = TRUE, mode = "wb", :
URL 'https://xeno-canto.org/513948/download': Timeout of 60 seconds was reached
Error in download.file(url = X, destfile = temp.file, quiet = TRUE, mode = "wb", :
cannot open URL 'https://www.xeno-canto.org/513948/download'
Calls: read_wave -> read_sound_file -> download.file
Execution halted
Flavor: r-devel-windows-x86_64
Version: 1.1.34
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'a_warbleR.Rmd' using rmarkdown
--- finished re-building 'a_warbleR.Rmd'
--- re-building 'b_annotation_data_format.Rmd' using rmarkdown
Quitting from b_annotation_data_format.Rmd:536-550 [unnamed-chunk-12]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `file()`:
! cannot open the connection to 'https://www.xeno-canto.org/api/2/recordings?query=nr:15607&page=1'
---
Backtrace:
▆
1. └─warbleR::query_xc(qword = "nr:15607", download = TRUE, path = tempdir())
2. └─warbleR:::.pblapply(...)
3. └─base::lapply(X, FUN, ...)
4. └─warbleR (local) FUN(X[[i]], ...)
5. └─rjson::fromJSON(...)
6. ├─base::paste(readLines(file, warn = FALSE), collapse = "")
7. └─base::readLines(file, warn = FALSE)
8. └─base::file(con, "r")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'b_annotation_data_format.Rmd' failed with diagnostics:
cannot open the connection to 'https://www.xeno-canto.org/api/2/recordings?query=nr:15607&page=1'
--- failed re-building 'b_annotation_data_format.Rmd'
--- re-building 'c_warbleR_workflow_02.Rmd' using rmarkdown
--- finished re-building 'c_warbleR_workflow_02.Rmd'
--- re-building 'd_warbleR_workflow_03.Rmd' using rmarkdown
--- finished re-building 'd_warbleR_workflow_03.Rmd'
SUMMARY: processing the following file failed:
'b_annotation_data_format.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-windows-x86_64
Version: 1.1.34
Check: installed package size
Result: NOTE
installed size is 8.7Mb
sub-directories of 1Mb or more:
doc 6.6Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.