Last updated on 2025-12-28 01:48:55 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.8.3 | 6.23 | 123.79 | 130.02 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.8.3 | 4.17 | 88.00 | 92.17 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.8.3 | 11.00 | 184.19 | 195.19 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.8.3 | 11.00 | 207.15 | 218.15 | OK | |
| r-devel-windows-x86_64 | 1.8.3 | 9.00 | 120.00 | 129.00 | ERROR | |
| r-patched-linux-x86_64 | 1.8.3 | 5.24 | 97.77 | 103.01 | OK | |
| r-release-linux-x86_64 | 1.8.3 | 5.14 | 101.63 | 106.77 | OK | |
| r-release-macos-arm64 | 1.8.3 | 1.00 | 36.00 | 37.00 | OK | |
| r-release-macos-x86_64 | 1.8.3 | 4.00 | 154.00 | 158.00 | OK | |
| r-release-windows-x86_64 | 1.8.3 | 7.00 | 123.00 | 130.00 | OK | |
| r-oldrel-macos-arm64 | 1.8.3 | 1.00 | 41.00 | 42.00 | OK | |
| r-oldrel-macos-x86_64 | 1.8.3 | 4.00 | 182.00 | 186.00 | OK | |
| r-oldrel-windows-x86_64 | 1.8.3 | 10.00 | 154.00 | 164.00 | OK |
Version: 1.8.3
Check: examples
Result: ERROR
Running examples in 'tidyfst-Ex.R' failed
The error most likely occurred in:
> ### Name: bind_tf_idf_dt
> ### Title: Compute TF–IDF Using data.table with Optional Counting and
> ### Grouping
> ### Aliases: bind_tf_idf_dt
>
> ### ** Examples
>
>
> # With groups
> df <- data.frame(
+ category = rep(c("A","B"), each = 6),
+ doc_id = rep(c("d1","d2","d3"), times = 4),
+ word = c("apple","banana","apple","banana","cherry","apple",
+ "dog","cat","dog","mouse","cat","dog"),
+ stringsAsFactors = FALSE
+ )
> result <- bind_tf_idf_dt(df, "category", "doc_id", "word")
Error in `[.data.table`(dt_counts, , `:=`(tf, n/sum(n)), by = c(grp, doc_col)) :
attempt access index 4/4 in VECTOR_ELT
Calls: bind_tf_idf_dt -> [ -> [.data.table
Execution halted
Flavor: r-devel-windows-x86_64
Version: 1.8.3
Check: tests
Result: ERROR
Running 'testthat.R' [4s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(tidyfst)
Thank you for using tidyfst!
To acknowledge our work, please cite the package:
Huang et al., (2020). tidyfst: Tidy Verbs for Fast Data Manipulation. Journal of Open Source Software, 5(52), 2388, https://doi.org/10.21105/joss.02388
Attaching package: 'tidyfst'
The following object is masked from 'package:base':
%notin%
>
> test_check("tidyfst")
Saving _problems/test-count_dt-34.R
Saving _problems/test-mutate_dt-13.R
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 169 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-count_dt.R:31:3'): add_count ───────────────────────────────────
Error in ``[.data.table`(dt, , `:=`((.name), .N), by = dot_string)`: attempt access index 5/5 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-count_dt.R:31:3
2. │ └─testthat::quasi_label(enquo(object), label)
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─iris %>% add_count_dt(Species)
5. └─tidyfst::add_count_dt(., Species)
6. ├─dt[, `:=`((.name), .N), by = dot_string]
7. └─data.table:::`[.data.table`(dt, , `:=`((.name), .N), by = dot_string)
── Error ('test-mutate_dt.R:10:3'): mutate and transmute ───────────────────────
Error in ``[.data.table`(structure(list(Sepal.Length = c(5.1, 4.9, 4.7, 4.6, 5, 5.4, 4.6, 5, 4.4, 4.9, 5.4, 4.8, 4.8, 4.3, 5.8, 5.7, 5.4, 5.1, 5.7, 5.1, 5.4, 5.1, 4.6, 5.1, 4.8, 5, 5, 5.2, 5.2, 4.7, 4.8, 5.4, 5.2, 5.5, 4.9, 5, 5.5, 4.9, 4.4, 5.1, 5, 4.5, 4.4, 5, 5.1, 4.8, 5.1, 4.6, 5.3, 5, 7, 6.4, 6.9, 5.5, 6.5, 5.7, 6.3, 4.9, 6.6, 5.2, 5, 5.9, 6, 6.1, 5.6, 6.7, 5.6, 5.8, 6.2, 5.6, 5.9, 6.1, 6.3, 6.1, 6.4, 6.6, 6.8, 6.7, 6, 5.7, 5.5, 5.5, 5.8, 6, 5.4, 6, 6.7, 6.3, 5.6, 5.5, 5.5, 6.1, 5.8, 5, 5.6, 5.7, 5.7, 6.2, 5.1, 5.7, 6.3, 5.8, 7.1, 6.3, 6.5, 7.6, 4.9, 7.3, 6.7, 7.2, 6.5, 6.4, 6.8, 5.7, 5.8, 6.4, 6.5, 7.7, 7.7, 6, 6.9, 5.6, 7.7, 6.3, 6.7, 7.2, 6.2, 6.1, 6.4, 7.2, 7.4, 7.9, 6.4, 6.3, 6.1, 7.7, 6.3, 6.4, 6, 6.9, 6.7, 6.9, 5.8, 6.8, 6.7, 6.7, 6.3, 6.5, 6.2, 5.9), Sepal.Width = c(3.5, 3, 3.2, 3.1, 3.6, 3.9, 3.4, 3.4, 2.9, 3.1, 3.7, 3.4, 3, 3, 4, 4.4, 3.9, 3.5, 3.8, 3.8, 3.4, 3.7, 3.6, 3.3, 3.4, 3, 3.4, 3.5, 3.4, 3.2, 3.1, 3.4, 4.1, 4.2, 3.1, 3.2, 3.5, 3.6, 3, 3.4, 3.5, 2.3, 3.2, 3.5, 3.8, 3, 3.8, 3.2, 3.7, 3.3, 3.2, 3.2, 3.1, 2.3, 2.8, 2.8, 3.3, 2.4, 2.9, 2.7, 2, 3, 2.2, 2.9, 2.9, 3.1, 3, 2.7, 2.2, 2.5, 3.2, 2.8, 2.5, 2.8, 2.9, 3, 2.8, 3, 2.9, 2.6, 2.4, 2.4, 2.7, 2.7, 3, 3.4, 3.1, 2.3, 3, 2.5, 2.6, 3, 2.6, 2.3, 2.7, 3, 2.9, 2.9, 2.5, 2.8, 3.3, 2.7, 3, 2.9, 3, 3, 2.5, 2.9, 2.5, 3.6, 3.2, 2.7, 3, 2.5, 2.8, 3.2, 3, 3.8, 2.6, 2.2, 3.2, 2.8, 2.8, 2.7, 3.3, 3.2, 2.8, 3, 2.8, 3, 2.8, 3.8, 2.8, 2.8, 2.6, 3, 3.4, 3.1, 3, 3.1, 3.1, 3.1, 2.7, 3.2, 3.3, 3, 2.5, 3, 3.4, 3), Petal.Length = c(1.4, 1.4, 1.3, 1.5, 1.4, 1.7, 1.4, 1.5, 1.4, 1.5, 1.5, 1.6, 1.4, 1.1, 1.2, 1.5, 1.3, 1.4, 1.7, 1.5, 1.7, 1.5, 1, 1.7, 1.9, 1.6, 1.6, 1.5, 1.4, 1.6, 1.6, 1.5, 1.5, 1.4, 1.5, 1.2, 1.3, 1.4, 1.3, 1.5, 1.3, 1.3, 1.3, 1.6, 1.9, 1.4, 1.6, 1.4, 1.5, 1.4, 4.7, 4.5, 4.9, 4, 4.6, 4.5, 4.7, 3.3, 4.6, 3.9, 3.5, 4.2, 4, 4.7, 3.6, 4.4, 4.5, 4.1, 4.5, 3.9, 4.8, 4, 4.9, 4.7, 4.3, 4.4, 4.8, 5, 4.5, 3.5, 3.8, 3.7, 3.9, 5.1, 4.5, 4.5, 4.7, 4.4, 4.1, 4, 4.4, 4.6, 4, 3.3, 4.2, 4.2, 4.2, 4.3, 3, 4.1, 6, 5.1, 5.9, 5.6, 5.8, 6.6, 4.5, 6.3, 5.8, 6.1, 5.1, 5.3, 5.5, 5, 5.1, 5.3, 5.5, 6.7, 6.9, 5, 5.7, 4.9, 6.7, 4.9, 5.7, 6, 4.8, 4.9, 5.6, 5.8, 6.1, 6.4, 5.6, 5.1, 5.6, 6.1, 5.6, 5.5, 4.8, 5.4, 5.6, 5.1, 5.1, 5.9, 5.7, 5.2, 5, 5.2, 5.4, 5.1), Petal.Width = c(0.2, 0.2, 0.2, 0.2, 0.2, 0.4, 0.3, 0.2, 0.2, 0.1, 0.2, 0.2, 0.1, 0.1, 0.2, 0.4, 0.4, 0.3, 0.3, 0.3, 0.2, 0.4, 0.2, 0.5, 0.2, 0.2, 0.4, 0.2, 0.2, 0.2, 0.2, 0.4, 0.1, 0.2, 0.2, 0.2, 0.2, 0.1, 0.2, 0.2, 0.3, 0.3, 0.2, 0.6, 0.4, 0.3, 0.2, 0.2, 0.2, 0.2, 1.4, 1.5, 1.5, 1.3, 1.5, 1.3, 1.6, 1, 1.3, 1.4, 1, 1.5, 1, 1.4, 1.3, 1.4, 1.5, 1, 1.5, 1.1, 1.8, 1.3, 1.5, 1.2, 1.3, 1.4, 1.4, 1.7, 1.5, 1, 1.1, 1, 1.2, 1.6, 1.5, 1.6, 1.5, 1.3, 1.3, 1.3, 1.2, 1.4, 1.2, 1, 1.3, 1.2, 1.3, 1.3, 1.1, 1.3, 2.5, 1.9, 2.1, 1.8, 2.2, 2.1, 1.7, 1.8, 1.8, 2.5, 2, 1.9, 2.1, 2, 2.4, 2.3, 1.8, 2.2, 2.3, 1.5, 2.3, 2, 2, 1.8, 2.1, 1.8, 1.8, 1.8, 2.1, 1.6, 1.9, 2, 2.2, 1.5, 1.4, 2.3, 2.4, 1.8, 1.8, 2.1, 2.4, 2.3, 1.9, 2.3, 2.5, 2.3, 1.9, 2, 2.3, 1.8), Species = structure(c(1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L), levels = c("setosa", "versicolor", "virginica"), class = "factor")), row.names = c(NA, -150L), class = c("data.table", "data.frame"), .internal.selfref = <pointer: 0x000002bc03e51650>), , `:=`(id = 1:.N, grp = .GRP), Species)`: attempt access index 5/5 in VECTOR_ELT
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-mutate_dt.R:10:3
2. │ └─testthat::quasi_label(enquo(object), label)
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. ├─iris %>% mutate_dt(id = 1:.N, grp = .GRP, by = Species)
5. └─tidyfst::mutate_dt(., id = 1:.N, grp = .GRP, by = Species)
6. └─base::eval.parent(substitute(dt[, `:=`(...), by][]), 1)
7. └─base::eval(expr, p)
8. └─base::eval(expr, p)
9. ├─`<dt[,5]>`[, `:=`(id = 1:.N, grp = .GRP), Species]
10. └─data.table:::`[.data.table`(...)
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 169 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-windows-x86_64
Version: 1.8.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'benchmark.Rmd' using rmarkdown
--- finished re-building 'benchmark.Rmd'
--- re-building 'chinese_tutorial.Rmd' using rmarkdown
--- finished re-building 'chinese_tutorial.Rmd'
--- re-building 'english_tutorial.Rmd' using rmarkdown
Quitting from english_tutorial.Rmd:149-198 [unnamed-chunk-6]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 4/4 in VECTOR_ELT
---
Backtrace:
▆
1. └─tidyfst::add_count_dt(DF, V1)
2. ├─dt[, `:=`((.name), .N), by = dot_string]
3. └─data.table:::`[.data.table`(dt, , `:=`((.name), .N), by = dot_string)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'english_tutorial.Rmd' failed with diagnostics:
attempt access index 4/4 in VECTOR_ELT
--- failed re-building 'english_tutorial.Rmd'
--- re-building 'example1_intro.Rmd' using rmarkdown
--- finished re-building 'example1_intro.Rmd'
--- re-building 'example2_join.Rmd' using rmarkdown
--- finished re-building 'example2_join.Rmd'
--- re-building 'example3_reshape.Rmd' using rmarkdown
--- finished re-building 'example3_reshape.Rmd'
--- re-building 'example4_nest.Rmd' using rmarkdown
--- finished re-building 'example4_nest.Rmd'
--- re-building 'example5_fst.Rmd' using rmarkdown
--- finished re-building 'example5_fst.Rmd'
--- re-building 'example6_dt.Rmd' using rmarkdown
--- finished re-building 'example6_dt.Rmd'
SUMMARY: processing the following file failed:
'english_tutorial.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-windows-x86_64
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