Last updated on 2026-01-21 01:49:31 CET.
| Package | ERROR | OK |
|---|---|---|
| mapi | 2 | 11 |
Current CRAN status: ERROR: 2, OK: 11
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [103s/365s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.568, system: 0.043, elapsed: 2.285 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.485, system: 0.088, elapsed: 13.014 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.017, elapsed: 0.659 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.517, system: 0.645, elapsed: 40.083 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.004, elapsed: 0.266 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.530, system: 0.815, elapsed: 57.077 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.632, system: 0.049, elapsed: 2.987 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.613, system: 0.113, elapsed: 16.491 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.015, elapsed: 0.514 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.421, system: 0.822, elapsed: 17.860 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.003, elapsed: 0.170 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.802, system: 1.031, elapsed: 38.829 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.624, system: 0.047, elapsed: 1.455 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.465, system: 0.074, elapsed: 11.860 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.317, system: 0.017, elapsed: 0.647 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.022, system: 0.884, elapsed: 134.175 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.007, elapsed: 0.232 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.258, system: 0.345, elapsed: 1.246 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.741, system: 1.425, elapsed: 150.448 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.588, system: 0.041, elapsed: 3.075 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.672, system: 0.082, elapsed: 14.445 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.210, system: 0.013, elapsed: 0.248 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.120, system: 0.755, elapsed: 69.381 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.002, elapsed: 0.199 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 13.085, system: 0.810, elapsed: 23.847 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 32.562, system: 1.733, elapsed: 112.282 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/243s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.575, system: 0.038, elapsed: 4.808 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.614, system: 0.053, elapsed: 33.857 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.017, elapsed: 0.587 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.265, system: 0.419, elapsed: 13.793 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.004, elapsed: 0.591 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.399, system: 0.554, elapsed: 55.455 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.574, system: 0.035, elapsed: 4.793 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.625, system: 0.087, elapsed: 28.385 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.209, system: 0.019, elapsed: 0.636 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.331, system: 0.439, elapsed: 12.703 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.417 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.476, system: 0.605, elapsed: 48.634 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.555, system: 0.030, elapsed: 3.977 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.540, system: 0.052, elapsed: 25.986 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.013, elapsed: 0.560 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.345, system: 0.421, elapsed: 12.748 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.004, elapsed: 0.466 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.225, system: 0.336, elapsed: 2.141 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.701, system: 0.879, elapsed: 47.612 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.615, system: 0.050, elapsed: 4.422 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.634, system: 0.127, elapsed: 25.662 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.016, elapsed: 0.557 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.274, system: 0.458, elapsed: 12.389 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.006, elapsed: 0.511 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.911, system: 0.502, elapsed: 29.732 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.473, system: 1.181, elapsed: 75.056 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64
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They may not be fully stable and should be used with caution. We make no claims about them.
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