Last updated on 2026-02-15 09:51:12 CET.
| Package | ERROR | OK |
|---|---|---|
| mapi | 2 | 12 |
Current CRAN status: ERROR: 2, OK: 12
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/15m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.697, system: 0.080, elapsed: 4.164 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.095, system: 0.392, elapsed: 27.586 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.029, elapsed: 1.207 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.453, system: 1.223, elapsed: 54.847 seconds]
Computing values for grid cells...
... done. [user: 0.200, system: 0.019, elapsed: 1.227 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.306, system: 1.885, elapsed: 91.871 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.974, system: 0.133, elapsed: 10.866 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.099, system: 0.278, elapsed: 58.254 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.235, system: 0.038, elapsed: 1.732 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 9.224, system: 2.131, elapsed: 182.352 seconds]
Computing values for grid cells...
... done. [user: 0.196, system: 0.015, elapsed: 0.675 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.447, system: 3.120, elapsed: 259.198 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.733, system: 0.091, elapsed: 5.800 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.989, system: 0.256, elapsed: 32.124 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.354, system: 0.034, elapsed: 1.759 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.704, system: 2.814, elapsed: 182.076 seconds]
Computing values for grid cells...
... done. [user: 0.211, system: 0.030, elapsed: 0.929 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
2 1 4 3
... computing probabilities from permuted values ...
... done. [user: 1.456, system: 0.513, elapsed: 3.993 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 23.327, system: 4.495, elapsed: 232.157 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.767, system: 0.156, elapsed: 8.432 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.067, system: 0.250, elapsed: 35.019 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.233, system: 0.040, elapsed: 1.543 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.429, system: 3.806, elapsed: 187.150 seconds]
Computing values for grid cells...
... done. [user: 0.196, system: 0.027, elapsed: 0.889 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.384, system: 1.581, elapsed: 59.991 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 34.035, system: 6.661, elapsed: 299.695 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/17m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.683, system: 0.057, elapsed: 4.630 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.024, system: 0.246, elapsed: 41.547 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.232, system: 0.030, elapsed: 1.356 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.534, system: 1.718, elapsed: 180.347 seconds]
Computing values for grid cells...
... done. [user: 0.190, system: 0.017, elapsed: 0.948 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.411, system: 2.493, elapsed: 232.713 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.840, system: 0.107, elapsed: 6.913 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.928, system: 0.222, elapsed: 42.815 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.231, system: 0.031, elapsed: 1.969 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.461, system: 1.699, elapsed: 179.382 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.015, elapsed: 1.064 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.362, system: 2.590, elapsed: 238.471 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.765, system: 0.086, elapsed: 7.914 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.092, system: 0.277, elapsed: 45.196 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.228, system: 0.032, elapsed: 1.585 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.541, system: 1.564, elapsed: 180.552 seconds]
Computing values for grid cells...
... done. [user: 0.195, system: 0.019, elapsed: 0.902 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.347, system: 0.397, elapsed: 3.378 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.984, system: 2.792, elapsed: 244.068 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.718, system: 0.066, elapsed: 5.544 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.918, system: 0.196, elapsed: 29.824 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.242, system: 0.033, elapsed: 2.208 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.495, system: 1.739, elapsed: 180.182 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.015, elapsed: 0.635 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.077, system: 1.046, elapsed: 52.532 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 32.451, system: 3.505, elapsed: 275.299 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64
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