Last updated on 2025-10-09 23:51:18 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.50 | 260.74 | 274.24 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.61 | 242.17 | 251.78 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 318.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 188.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.65 | 265.06 | 280.71 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.03 | 250.02 | 263.05 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 181.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 177.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 235.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/124s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.535, system: 0.054, elapsed: 2.198 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.263, system: 0.257, elapsed: 14.627 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.017, elapsed: 0.280 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.864, system: 0.267, elapsed: 5.630 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.007, elapsed: 0.256 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.558, system: 0.630, elapsed: 23.766 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.704, system: 0.080, elapsed: 2.706 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.265, system: 0.243, elapsed: 15.531 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.511 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.930, system: 0.232, elapsed: 6.552 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.006, elapsed: 0.270 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.797, system: 0.606, elapsed: 26.705 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.669, system: 0.065, elapsed: 2.428 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.113, system: 0.157, elapsed: 13.129 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.296 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.806, system: 0.202, elapsed: 5.738 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.331 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.192, system: 0.220, elapsed: 1.572 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.755, system: 0.689, elapsed: 24.490 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.729, system: 0.101, elapsed: 2.607 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.321, system: 0.355, elapsed: 12.790 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.023, elapsed: 0.336 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.092, system: 0.320, elapsed: 6.387 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.003, elapsed: 0.303 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.387, system: 0.496, elapsed: 18.774 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.542, system: 1.343, elapsed: 42.234 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [81s/118s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.571, system: 0.057, elapsed: 2.078 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.868, system: 0.123, elapsed: 10.579 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.016, elapsed: 0.308 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.574, system: 0.242, elapsed: 5.290 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.011, elapsed: 0.319 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.901, system: 0.474, elapsed: 19.226 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.697, system: 0.074, elapsed: 2.356 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.269, system: 0.274, elapsed: 11.863 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.013, elapsed: 0.232 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.807, system: 0.250, elapsed: 5.513 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.009, elapsed: 0.198 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.660, system: 0.663, elapsed: 20.994 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.761, system: 0.081, elapsed: 2.197 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.094, system: 0.208, elapsed: 15.508 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.262 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.641, system: 0.186, elapsed: 5.797 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.012, elapsed: 0.230 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.046, system: 0.235, elapsed: 0.934 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.526, system: 0.768, elapsed: 25.807 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.542, system: 0.039, elapsed: 2.130 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.323, system: 0.292, elapsed: 14.507 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.019, elapsed: 0.343 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.755, system: 0.277, elapsed: 6.520 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.011, elapsed: 0.454 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.163, system: 0.469, elapsed: 19.600 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.787, system: 1.148, elapsed: 44.619 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64
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