Last updated on 2025-08-07 09:49:22 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.66 | 249.40 | 262.06 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.40 | 204.29 | 214.69 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.52 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.69 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 18.00 | 189.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 16.22 | 267.02 | 283.24 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.83 | 260.48 | 274.31 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 160.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 191.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 158.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 242.00 | 266.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/113s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.476, system: 0.039, elapsed: 1.928 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.924, system: 0.091, elapsed: 13.766 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.016, elapsed: 0.391 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.770, system: 0.200, elapsed: 6.515 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.005, elapsed: 0.287 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.062, system: 0.375, elapsed: 23.662 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.443, system: 0.032, elapsed: 2.501 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.013, system: 0.081, elapsed: 14.822 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.012, elapsed: 0.393 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.657, system: 0.160, elapsed: 5.518 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.004, elapsed: 0.240 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.007, system: 0.312, elapsed: 24.416 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.529, system: 0.030, elapsed: 2.286 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.983, system: 0.062, elapsed: 11.952 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.010, elapsed: 0.237 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.658, system: 0.169, elapsed: 5.234 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.246 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.131, system: 0.207, elapsed: 1.055 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.289, system: 0.504, elapsed: 21.930 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.476, system: 0.045, elapsed: 2.042 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.018, system: 0.145, elapsed: 13.279 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.015, elapsed: 0.347 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.725, system: 0.216, elapsed: 5.899 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.003, elapsed: 0.197 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.209, system: 0.475, elapsed: 14.061 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.411, system: 0.937, elapsed: 36.837 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/105s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.521, system: 0.043, elapsed: 1.941 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.871, system: 0.072, elapsed: 11.062 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.011, elapsed: 0.236 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.447, system: 0.178, elapsed: 4.831 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.003, elapsed: 0.241 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.700, system: 0.329, elapsed: 19.006 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.450, system: 0.026, elapsed: 2.181 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.876, system: 0.060, elapsed: 15.023 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.012, elapsed: 0.248 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.547, system: 0.160, elapsed: 5.176 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.247 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.742, system: 0.286, elapsed: 23.692 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.500, system: 0.031, elapsed: 2.426 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.949, system: 0.072, elapsed: 12.959 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.255 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.420, system: 0.156, elapsed: 4.452 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.218 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.073, system: 0.227, elapsed: 1.036 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.919, system: 0.538, elapsed: 22.292 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.452, system: 0.027, elapsed: 2.005 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.876, system: 0.062, elapsed: 11.956 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.012, elapsed: 0.243 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.431, system: 0.169, elapsed: 4.821 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.006, elapsed: 0.215 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.019, system: 0.568, elapsed: 14.164 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.781, system: 0.873, elapsed: 34.288 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64
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