Last updated on 2025-07-17 11:50:38 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.82 | 256.19 | 269.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.93 | 206.19 | 217.12 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.22 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 383.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.45 | 273.53 | 287.98 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.61 | 277.85 | 291.46 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 161.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 182.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 157.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 233.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/114s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.457, system: 0.040, elapsed: 1.640 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.934, system: 0.090, elapsed: 11.829 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.013, elapsed: 0.287 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.665, system: 0.180, elapsed: 5.808 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.270 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.943, system: 0.349, elapsed: 20.608 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.462, system: 0.031, elapsed: 2.529 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.959, system: 0.069, elapsed: 15.002 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.011, elapsed: 0.279 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.713, system: 0.169, elapsed: 6.293 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.004, elapsed: 0.234 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.009, system: 0.304, elapsed: 25.270 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.500, system: 0.028, elapsed: 2.440 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.951, system: 0.057, elapsed: 12.244 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.310 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.666, system: 0.172, elapsed: 5.637 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.002, elapsed: 0.232 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.143, system: 0.228, elapsed: 1.162 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.260, system: 0.524, elapsed: 23.152 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.452, system: 0.030, elapsed: 2.126 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.869, system: 0.049, elapsed: 13.052 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.012, elapsed: 0.354 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.652, system: 0.206, elapsed: 5.769 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.005, elapsed: 0.250 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.211, system: 0.552, elapsed: 15.975 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.195, system: 0.885, elapsed: 38.550 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/107s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.426, system: 0.037, elapsed: 1.556 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.027, system: 0.097, elapsed: 11.271 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.235 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.473, system: 0.176, elapsed: 4.082 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.004, elapsed: 0.178 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.790, system: 0.343, elapsed: 18.017 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.489, system: 0.034, elapsed: 1.651 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.976, system: 0.055, elapsed: 13.159 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.399 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.641, system: 0.168, elapsed: 6.522 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.004, elapsed: 0.268 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.995, system: 0.297, elapsed: 22.801 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.526, system: 0.028, elapsed: 2.578 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.978, system: 0.051, elapsed: 14.948 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.011, elapsed: 0.338 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.515, system: 0.164, elapsed: 5.449 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.234 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.067, system: 0.216, elapsed: 0.974 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.076, system: 0.514, elapsed: 25.578 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.461, system: 0.028, elapsed: 2.107 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.951, system: 0.051, elapsed: 12.711 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.011, elapsed: 0.254 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.511, system: 0.162, elapsed: 5.252 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.006, elapsed: 0.274 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.912, system: 0.548, elapsed: 12.908 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.824, system: 0.836, elapsed: 34.477 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64
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