Last updated on 2025-12-28 01:48:43 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.06 | 244.27 | 258.33 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.36 | 284.46 | 293.82 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 25.00 | 289.70 | 314.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 27.00 | 350.69 | 377.69 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 190.00 | 211.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.19 | 283.55 | 298.74 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.00 | 255.84 | 270.84 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 316.00 | 328.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 192.00 | 213.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 553.00 | 563.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 236.00 | 262.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [99s/236s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 2.046, system: 0.165, elapsed: 4.887 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.271, system: 0.511, elapsed: 20.582 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.021, elapsed: 0.268 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.830, system: 0.628, elapsed: 8.716 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.008, elapsed: 0.287 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.132, system: 1.383, elapsed: 35.742 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.830, system: 0.118, elapsed: 2.891 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.149, system: 0.501, elapsed: 24.715 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.211, system: 0.030, elapsed: 0.946 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 5.020, system: 0.643, elapsed: 21.797 seconds]
Computing values for grid cells...
... done. [user: 0.199, system: 0.013, elapsed: 0.790 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.055, system: 1.534, elapsed: 53.261 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.687, system: 0.072, elapsed: 5.512 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.200, system: 0.427, elapsed: 31.993 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.027, elapsed: 0.644 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 5.136, system: 0.797, elapsed: 12.376 seconds]
Computing values for grid cells...
... done. [user: 0.200, system: 0.021, elapsed: 0.417 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.419, system: 0.377, elapsed: 1.892 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.599, system: 1.807, elapsed: 54.971 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.969, system: 0.154, elapsed: 3.201 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.217, system: 0.518, elapsed: 33.841 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.032, elapsed: 0.900 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.968, system: 0.636, elapsed: 14.326 seconds]
Computing values for grid cells...
... done. [user: 0.203, system: 0.015, elapsed: 0.546 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.717, system: 0.811, elapsed: 25.089 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.020, system: 2.220, elapsed: 79.366 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [88s/192s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.787, system: 0.075, elapsed: 3.126 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.804, system: 0.247, elapsed: 15.688 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.021, elapsed: 0.348 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.185, system: 0.489, elapsed: 6.338 seconds]
Computing values for grid cells...
... done. [user: 0.147, system: 0.003, elapsed: 0.151 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.703, system: 0.868, elapsed: 26.588 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.346, system: 0.029, elapsed: 1.483 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.722, system: 0.242, elapsed: 11.750 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.014, elapsed: 0.234 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.034, system: 0.413, elapsed: 5.355 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.189 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.959, system: 0.723, elapsed: 19.568 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.506, system: 0.034, elapsed: 3.207 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.855, system: 0.210, elapsed: 31.546 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.014, elapsed: 0.638 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.429, system: 0.430, elapsed: 12.822 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.004, elapsed: 0.406 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.163, system: 0.302, elapsed: 1.954 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.968, system: 1.023, elapsed: 52.433 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.670, system: 0.036, elapsed: 4.673 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.766, system: 0.088, elapsed: 27.590 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.014, elapsed: 0.617 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.338, system: 0.439, elapsed: 14.127 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.479 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.672, system: 0.534, elapsed: 31.487 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.491, system: 1.137, elapsed: 80.774 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64
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