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Last updated on 2026-09-16 05:51:13 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.0 | 29.65 | 465.89 | 495.54 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.0.0 | 18.14 | 302.89 | 321.03 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0.0 | 24.00 | 304.91 | 328.91 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 1.0.0 | 22.00 | 338.18 | 360.18 | ERROR | |
| r-devel-windows-x86_64 | 1.0.0 | 32.00 | 466.00 | 498.00 | ERROR | |
| r-patched-linux-x86_64 | 1.0.0 | 30.66 | 443.21 | 473.87 | ERROR | |
| r-release-linux-x86_64 | 1.0.0 | 29.07 | 442.03 | 471.10 | ERROR | |
| r-release-macos-arm64 | 1.0.0 | 9.00 | 100.00 | 109.00 | OK | |
| r-release-macos-x86_64 | 1.0.0 | 23.00 | 537.00 | 560.00 | OK | |
| r-release-windows-x86_64 | 1.0.0 | 35.00 | 461.00 | 496.00 | ERROR | |
| r-oldrel-macos-arm64 | 1.0.0 | 9.00 | 102.00 | 111.00 | OK | |
| r-oldrel-macos-x86_64 | 1.0.0 | 23.00 | 446.00 | 469.00 | OK | |
| r-oldrel-windows-x86_64 | 1.0.0 | 42.00 | 592.00 | 634.00 | ERROR |
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [269s/350s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(surveycore)
>
> test_check("surveycore")
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
# A survey_diffs result
# Design: Taylor series | Family: gaussian (identity)
# DV: y | Treatment: arm (ref: Ctrl)
# Method: coefficient / intercept
# A <survey_diffs> [2 × 4]
# A tibble: 2 x 4
arm estimate mean n
<fct> <dbl> <dbl> <int>
1 Ctrl 0 0.5 100
2 T1 0.05 0.55 100
Saving _problems/test-analysis-diffs-helpers-478.R
Saving _problems/test-analysis-diffs-helpers-668.R
Saving _problems/test-analysis-diffs-helpers-669.R
Saving _problems/test-analysis-diffs-helpers-876.R
Saving _problems/test-analysis-diffs-helpers-1056.R
Saving _problems/test-analysis-diffs-helpers-1352.R
Saving _problems/test-analysis-diffs-471.R
Saving _problems/test-analysis-diffs-490.R
Saving _problems/test-analysis-diffs-569.R
Saving _problems/test-analysis-diffs-1034.R
# A survey_t_test result
# Design: Taylor series | N: 400
# DV: outcome | By: grp2 (A vs. B)
# A <tbl_df> [1 × 13]
# A tibble: 1 x 13
level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat df
<chr> <chr> <dbl> <dbl> <dbl> <int> <int> <dbl> <dbl> <dbl> <dbl>
1 A B 3.51 50.9 54.4 209 191 1.16 5.86 3.18 15
# i 2 more variables: p_value <dbl>, stars <chr>
# A survey_pairwise result
# Design: Taylor series | N: 400
# DV: outcome | By: grp3 (3 levels, 3 pairs)
# Adjustment: holm
# A <tbl_df> [3 × 13]
# A tibble: 3 x 13
level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat
<chr> <chr> <dbl> <dbl> <dbl> <int> <int> <dbl> <dbl> <dbl>
1 X Y -0.910 53.1 52.2 145 136 -3.59 1.77 -0.725
2 X Z -0.847 53.1 52.3 145 119 -3.77 2.08 -0.617
3 Y Z 0.0631 52.2 52.3 136 119 -2.78 2.91 0.0473
# i 3 more variables: df <dbl>, p_value <dbl>, stars <chr>
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
-- Survey Design ---------------------------------------------------------------
<survey_nonprob> (non-probability) [experimental]
* Variance: SRS approximation (no bootstrap replicate weights)
Sample size: 10
# A tibble: 10 x 2
y w
<int> <dbl>
1 1 1
2 2 1
3 3 1
4 4 1
5 5 1
6 6 1
7 7 1
8 8 1
9 9 1
10 10 1
-- Survey Design Summary -------------------------------------------------------
Type: non-probability [experimental]
Sample size: 10
Weighted N: 10
-- Design --
Weights: w
* Range: 1 – 1
* Mean: 1
* CV: 0
Calibration provenance: none stored
Metadata: 0 of 2 variable(s) labeled
Survey-weighted GLM
Family: gaussian (identity link)
Formula: y1 ~ y2 + y3
Design: Taylor series
Coefficients:
(Intercept) y2 y3
51.1868 -0.0624 -2.6042
Degrees of freedom: 16 (design-based)
Survey-weighted GLM
Call:
survey_glm(design = .glm_taylor(), formula = y1 ~ y2 + y3)
Deviance Residuals:
Min 1Q Median 3Q Max
-93.3797 -18.7253 -0.4633 22.9540 75.4878
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 51.1868 0.7268 70.4262 0.0000 ***
y2 -0.0624 0.8308 -0.0752 0.9412
y3 -2.6042 1.4802 -1.7594 0.1003
---
Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
(Dispersion parameter for gaussian family taken to be 986.9)
Null deviance: 197426 on 199 degrees of freedom
Residual deviance: 194412 on 197 degrees of freedom
AIC: 1492
Design df: 16 (taylor)
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
# i 49 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 10
psu strata fpc wt y1 y2 y3 group prob ..surveycore_wt..
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl>
1 psu_1 stratum~ 378 14.3 50.9 -0.122 1 A 0.0701 14.3
2 psu_1 stratum~ 378 21.8 20.1 0.188 0 B 0.0459 21.8
3 psu_1 stratum~ 378 14.4 52.8 0.119 1 B 0.0697 14.4
4 psu_2 stratum~ 378 18.9 46.3 -0.0251 0 A 0.0530 18.9
5 psu_2 stratum~ 378 23.0 51.9 0.108 0 B 0.0435 23.0
6 psu_2 stratum~ 378 11.0 55.8 -0.485 0 C 0.0908 11.0
7 psu_2 stratum~ 378 13.8 64.0 -0.504 0 A 0.0727 13.8
8 psu_2 stratum~ 378 14.2 42.7 -1.66 0 B 0.0706 14.2
9 psu_3 stratum~ 378 16.5 63.0 -0.382 1 C 0.0606 16.5
10 psu_3 stratum~ 378 13.7 53.4 -0.513 1 A 0.0728 13.7
# i 40 more rows
# A tibble: 30 x 9
psu strata fpc wt y1 y2 y3 group ..surveycore_wt..
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <int>
1 psu_1 stratum_1 218 14.3 41.5 1.04 1 B 1
2 psu_1 stratum_1 218 21.8 25.9 0.921 1 B 1
3 psu_2 stratum_1 218 14.4 50.4 0.721 0 B 1
4 psu_2 stratum_1 218 18.9 52.1 -1.04 1 A 1
5 psu_2 stratum_1 218 23.0 46.4 -0.0902 0 A 1
6 psu_3 stratum_1 218 11.0 57.6 0.624 0 C 1
7 psu_3 stratum_1 218 13.7 42.7 -0.954 0 B 1
8 psu_4 stratum_1 218 14.2 36.3 -0.543 0 B 1
9 psu_4 stratum_1 218 16.5 54.3 0.581 0 C 1
10 psu_4 stratum_1 218 13.7 41.9 0.768 0 C 1
# i 20 more rows
# A tibble: 50 x 13
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
# i 49 more rows
# i 2 more variables: repwt_4 <dbl>, repwt_5 <dbl>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
# i 59 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 50 x 13
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8
# i 40 more rows
# i 2 more variables: repwt_4 <dbl>, repwt_5 <dbl>
# A tibble: 50 x 14
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8
# i 40 more rows
# i 3 more variables: repwt_4 <dbl>, repwt_5 <dbl>, fpc_rep <int>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687
3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687
4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687
5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687
6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687
7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687
8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687
9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687
10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687
# i 50 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687
3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687
4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687
5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687
6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687
7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687
8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687
9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687
10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687
# i 50 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 30 x 2
y w
<dbl> <dbl>
1 0.828 2.00
2 0.0757 1.11
3 0.126 1.85
4 2.27 1.22
5 -0.838 1.30
6 -0.469 1.48
7 0.0155 1.20
8 0.961 1.41
9 -0.281 0.965
10 0.0697 1.51
# i 20 more rows
# A tibble: 100 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 538 11.6 50.9 -1.43 0 C FALSE 0.0967
2 psu_1 stratum_1 538 12.0 46.7 -0.718 0 C FALSE 0.0967
3 psu_1 stratum_1 538 12.1 42.0 0.205 1 A TRUE 0.0967
4 psu_1 stratum_1 538 11.6 30.8 -1.90 0 A FALSE 0.0967
5 psu_1 stratum_1 538 9.12 53.7 -0.449 0 A FALSE 0.0967
6 psu_1 stratum_1 538 10.3 56.6 0.523 0 B TRUE 0.0967
7 psu_1 stratum_1 538 9.43 69.5 -0.123 0 C FALSE 0.0967
8 psu_1 stratum_1 538 10.7 55.8 -1.11 1 B TRUE 0.0967
9 psu_1 stratum_1 538 10.5 39.5 -0.774 1 C FALSE 0.0967
10 psu_1 stratum_1 538 10.1 39.8 0.615 0 C FALSE 0.0967
# i 90 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 2
y wt
<int> <dbl>
1 1 1
2 2 1
3 3 1
4 4 1
5 5 1
6 6 1
7 7 1
8 8 1
9 9 1
10 10 1
-- Survey Design ---------------------------------------------------------------
<survey_nonprob> (non-probability, JK1, 4 replicates) [experimental]
Sample size: 10
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
i Skipped 1 survey missing the requested variable: "only".
[ FAIL 10 | WARN 335 | SKIP 426 | PASS 11128 ]
══ Skipped tests (426) ═════════════════════════════════════════════════════════
• A-13 trigger requires careful numerical construction; tracked for follow-up
PR (1): 'test-glm-anova.R:531:3'
• A-20 requires a hand-built fit whose @design@data domain column differs from
the refit's; deferred to follow-up PR (1): 'test-glm-anova.R:481:3'
• On CRAN (422): 'test-analysis-corr-latent-primitives.R:74:1',
'test-analysis-corr-latent-primitives.R:97:1',
'test-analysis-corr-latent-primitives.R:152:1',
'test-analysis-corr-latent-primitives.R:348:1',
'test-analysis-corr-latent-primitives.R:482:1',
'test-analysis-corr-latent-primitives.R:741:1',
'test-analysis-corr-latent-variance.R:14:1',
'test-analysis-corr-latent.R:20:1', 'test-analysis-corr.R:809:1',
'test-analysis-corr.R:817:1', 'test-analysis-corr.R:1231:1',
'test-analysis-corr.R:1646:1', 'test-analysis-corr.R:1664:1',
'test-analysis-covariance.R:690:1', 'test-analysis-covariance.R:699:1',
'test-analysis-covariance.R:712:1', 'test-analysis-covariance.R:734:1',
'test-analysis-covariance.R:747:1', 'test-analysis-covariance.R:768:1',
'test-analysis-covariance.R:785:1', 'test-analysis-covariance.R:798:1',
'test-analysis-covariance.R:819:1', 'test-analysis-covariance.R:851:1',
'test-analysis-covariance.R:884:1', 'test-analysis-covariance.R:924:1',
'test-analysis-covariance.R:1131:1', 'test-analysis-covariance.R:1154:1',
'test-analysis-covariance.R:1176:1', 'test-analysis-diffs-helpers.R:147:1',
'test-analysis-diffs-helpers.R:388:1',
'test-analysis-diffs-marginaleffects.R:6:1',
'test-analysis-diffs-numerical.R:6:1', 'test-analysis-diffs.R:30:1',
'test-analysis-diffs.R:39:1', 'test-analysis-diffs.R:48:1',
'test-analysis-diffs.R:57:1', 'test-analysis-diffs.R:66:1',
'test-analysis-diffs.R:77:1', 'test-analysis-diffs.R:89:1',
'test-analysis-diffs.R:101:1', 'test-analysis-diffs.R:435:1',
'test-analysis-diffs.R:765:1', 'test-analysis-diffs.R:774:1',
'test-analysis-diffs.R:783:1', 'test-analysis-diffs.R:792:1',
'test-analysis-diffs.R:801:1', 'test-analysis-diffs.R:810:1',
'test-analysis-freqs.R:578:1', 'test-analysis-freqs.R:589:1',
'test-analysis-freqs.R:610:1', 'test-analysis-freqs.R:631:1',
'test-analysis-freqs.R:652:1', 'test-analysis-freqs.R:1255:1',
'test-analysis-freqs.R:1499:1', 'test-analysis-helpers.R:59:1',
'test-analysis-helpers.R:77:1', 'test-analysis-helpers.R:110:1',
'test-analysis-helpers.R:398:1', 'test-analysis-helpers.R:754:1',
'test-analysis-helpers.R:1113:1', 'test-analysis-helpers.R:1153:1',
'test-analysis-helpers.R:1462:1', 'test-analysis-means.R:320:1',
'test-analysis-means.R:349:1', 'test-analysis-means.R:812:1',
'test-analysis-quantiles.R:716:1', 'test-analysis-quantiles.R:724:1',
'test-analysis-quantiles.R:759:1', 'test-analysis-quantiles.R:771:1',
'test-analysis-quantiles.R:1095:1', 'test-analysis-ratios.R:578:1',
'test-analysis-ratios.R:588:1', 'test-analysis-ratios.R:598:1',
'test-analysis-ratios.R:608:1', 'test-analysis-ratios.R:1040:1',
'test-analysis-t-test-numerical.R:6:1', 'test-analysis-t-test.R:285:1',
'test-analysis-t-test.R:310:1', 'test-analysis-t-test.R:319:1',
'test-analysis-t-test.R:328:1', 'test-analysis-t-test.R:340:1',
'test-analysis-t-test.R:352:1', 'test-analysis-t-test.R:364:1',
'test-analysis-t-test.R:377:1', 'test-analysis-t-test.R:393:1',
'test-analysis-t-test.R:402:1', 'test-analysis-t-test.R:414:1',
'test-analysis-t-test.R:426:1', 'test-analysis-t-test.R:754:1',
'test-analysis-t-test.R:820:1', 'test-analysis-t-test.R:831:1',
'test-analysis-totals.R:301:1', 'test-analysis-totals.R:320:1',
'test-analysis-totals.R:624:1', 'test-analysis-variance-collection.R:122:1',
'test-analysis-variance-collection.R:146:1',
'test-analysis-variance-collection.R:169:1',
'test-analysis-variance-collection.R:182:1',
'test-analysis-variance-twophase-nonprob.R:9:1',
'test-analysis-variance.R:598:1', 'test-analysis-variance.R:608:1',
'test-analysis-variance.R:622:1', 'test-analysis-variance.R:634:1',
'test-analysis-variance.R:646:1', 'test-analysis-variance.R:657:1',
'test-analysis-variance.R:676:1', 'test-analysis-variance.R:691:1',
'test-analysis-variance.R:705:1', 'test-calibration.R:73:1',
'test-calibration.R:84:1', 'test-calibration.R:96:1',
'test-calibration.R:108:1', 'test-calibration.R:120:1',
'test-calibration.R:132:1', 'test-calibration.R:144:1',
'test-calibration.R:156:1', 'test-calibration.R:170:1',
'test-calibration.R:182:1', 'test-calibration.R:194:1',
'test-calibration.R:207:1', 'test-calibration.R:223:1',
'test-calibration.R:238:1', 'test-calibration.R:264:1',
'test-calibration.R:737:1', 'test-calibration.R:748:1',
'test-calibration.R:762:1', 'test-calibration.R:776:1',
'test-calibration.R:788:1', 'test-calibration.R:802:1',
'test-calibration.R:840:1', 'test-calibration.R:854:1',
'test-calibration.R:866:1', 'test-calibration.R:878:1',
'test-calibration.R:893:1', 'test-calibration.R:906:1',
'test-calibration.R:919:1', 'test-calibration.R:949:1',
'test-calibration.R:974:1', 'test-calibration.R:1002:1',
'test-collection-groups.R:352:1', 'test-collection-groups.R:362:1',
'test-collection-groups.R:375:1', 'test-collection-groups.R:411:1',
'test-collection-groups.R:549:1', 'test-collection-groups.R:556:1',
'test-constructors.R:145:1', 'test-constructors.R:161:1',
'test-constructors.R:171:1', 'test-constructors.R:189:1',
'test-constructors.R:199:1', 'test-constructors.R:259:1',
'test-constructors.R:272:1', 'test-constructors.R:302:1',
'test-constructors.R:329:1', 'test-constructors.R:347:1',
'test-constructors.R:361:1', 'test-constructors.R:730:1',
'test-constructors.R:752:1', 'test-constructors.R:827:1',
'test-constructors.R:850:1', 'test-constructors.R:1145:1',
'test-constructors.R:1159:1', 'test-constructors.R:1200:1',
'test-constructors.R:1211:1', 'test-constructors.R:1227:1',
'test-constructors.R:1243:1', 'test-constructors.R:1265:1',
'test-constructors.R:1613:1', 'test-constructors.R:1624:1',
'test-constructors.R:1636:1', 'test-constructors.R:1648:1',
'test-constructors.R:1660:1', 'test-constructors.R:1672:1',
'test-constructors.R:1738:1', 'test-constructors.R:1744:1',
'test-constructors.R:1750:1', 'test-constructors.R:1756:1',
'test-constructors.R:1762:1', 'test-constructors.R:1769:1',
'test-constructors.R:1917:1', 'test-constructors.R:2079:1',
'test-constructors.R:2091:1', 'test-constructors.R:2103:1',
'test-constructors.R:2115:1', 'test-constructors.R:2137:1',
'test-constructors.R:2159:1', 'test-constructors.R:2181:1',
'test-constructors.R:2193:1', 'test-constructors.R:2216:1',
'test-constructors.R:2289:1', 'test-constructors.R:2316:1',
'test-constructors.R:2343:1', 'test-constructors.R:2497:1',
'test-constructors.R:2524:1', 'test-constructors.R:2551:1',
'test-constructors.R:2648:1', 'test-constructors.R:2686:1',
'test-constructors.R:2710:1', 'test-constructors.R:2734:1',
'test-constructors.R:2757:1', 'test-constructors.R:2781:1',
'test-constructors.R:2891:1', 'test-constructors.R:2906:1',
'test-constructors.R:2921:1', 'test-constructors.R:2940:1',
'test-constructors.R:2959:1', 'test-constructors.R:2978:1',
'test-constructors.R:3009:1', 'test-constructors.R:3021:1',
'test-constructors.R:3035:1', 'test-constructors.R:3050:1',
'test-constructors.R:3067:1', 'test-effective-n.R:212:1',
'test-effective-n.R:220:1', 'test-effective-n.R:229:1',
'test-effective-n.R:444:1', 'test-effective-n.R:452:1',
'test-effective-n.R:460:1', 'test-effective-n.R:468:1',
'test-glm-anova-dispatch.R:270:1', 'test-glm-anova-dispatch.R:274:1',
'test-glm-anova-dispatch.R:280:1', 'test-glm-anova-dispatch.R:284:1',
'test-glm-anova-dispatch.R:289:1', 'test-glm-anova-dispatch.R:295:1',
'test-glm-anova-numerical.R:18:1', 'test-glm-anova.R:353:1',
'test-glm-anova.R:361:1', 'test-glm-anova.R:374:1', 'test-glm-anova.R:398:1',
'test-glm-anova.R:412:1', 'test-glm-anova.R:426:1', 'test-glm-anova.R:436:1',
'test-glm-anova.R:694:1', 'test-glm-anova.R:700:1', 'test-glm-anova.R:709:1',
'test-glm-anova.R:811:1', 'test-glm-anova.R:822:1', 'test-glm-anova.R:833:1',
'test-glm-anova.R:859:1', 'test-glm-anova.R:871:1', 'test-glm-anova.R:919:1',
'test-glm-marginaleffects.R:9:1', 'test-glm-methods.R:52:1',
'test-glm-methods.R:109:1', 'test-glm-methods.R:115:1',
'test-glm-methods.R:205:1', 'test-glm-methods.R:289:1',
'test-glm-methods.R:299:1', 'test-glm-methods.R:312:1',
'test-glm-methods.R:325:1', 'test-glm-methods.R:392:1',
'test-glm-methods.R:424:1', 'test-glm-methods.R:449:1',
'test-glm-methods.R:474:1', 'test-glm-methods.R:526:1',
'test-glm-methods.R:548:1', 'test-glm-methods.R:575:1',
'test-glm-methods.R:584:1', 'test-glm-methods.R:611:1',
'test-glm-methods.R:660:1', 'test-glm-methods.R:675:1',
'test-glm-numerical.R:14:1', 'test-glm.R:128:1', 'test-glm.R:177:1',
'test-glm.R:186:1', 'test-glm.R:196:1', 'test-glm.R:206:1',
'test-glm.R:219:1', 'test-glm.R:229:1', 'test-glm.R:239:1',
'test-glm.R:249:1', 'test-glm.R:261:1', 'test-glm.R:273:1',
'test-glm.R:309:1', 'test-glm.R:325:1', 'test-glm.R:1007:1',
'test-glm.R:1015:1', 'test-glm.R:1288:1', 'test-metadata-infer.R:408:1',
'test-metadata-system.R:187:1', 'test-metadata-system.R:709:1',
'test-metadata-system.R:713:1', 'test-metadata-system.R:721:1',
'test-metadata-system.R:726:1', 'test-metadata-system.R:734:1',
'test-metadata-system.R:739:1', 'test-metadata-system.R:744:1',
'test-metadata-system.R:749:1', 'test-metadata-system.R:925:1',
'test-metadata-system.R:930:1', 'test-metadata-system.R:935:1',
'test-metadata-system.R:939:1', 'test-metadata-system.R:944:1',
'test-metadata-system.R:952:1', 'test-metadata-system.R:960:1',
'test-metadata-system.R:965:1', 'test-metadata-system.R:1107:1',
'test-metadata-system.R:1114:1', 'test-metadata-system.R:1119:1',
'test-metadata-system.R:1127:1', 'test-metadata-system.R:1132:1',
'test-metadata-system.R:1140:1', 'test-metadata-system.R:1145:1',
'test-metadata-system.R:1278:1', 'test-metadata-system.R:1282:1',
'test-metadata-system.R:1290:1', 'test-metadata-system.R:1295:1',
'test-metadata-system.R:1303:1', 'test-metadata-system.R:1308:1',
'test-metadata-system.R:1313:1', 'test-metadata-system.R:1439:1',
'test-metadata-system.R:1443:1', 'test-metadata-system.R:1448:1',
'test-metadata-system.R:1456:1', 'test-metadata-system.R:1461:1',
'test-metadata-system.R:1469:1', 'test-metadata-system.R:1474:1',
'test-metadata-system.R:1623:1', 'test-metadata-system.R:1628:1',
'test-metadata-system.R:1635:1', 'test-metadata-system.R:1643:1',
'test-metadata-system.R:1648:1', 'test-metadata-system.R:1660:1',
'test-metadata-system.R:1665:1', 'test-metadata-system.R:1887:1',
'test-metadata-system.R:2040:1', 'test-metadata-system.R:2054:1',
'test-metadata-system.R:2068:1', 'test-metadata-system.R:2082:1',
'test-metadata-system.R:2202:1', 'test-metadata-system.R:2438:1',
'test-metadata-system.R:2442:1', 'test-metadata-system.R:2622:1',
'test-metadata-system.R:2630:1', 'test-metadata-system.R:2648:1',
'test-metadata-system.R:2663:1', 'test-metadata-system.R:2678:1',
'test-metadata-system.R:2858:1', 'test-metadata-system.R:2866:1',
'test-metadata-system.R:2881:1', 'test-metadata-system.R:2896:1',
'test-metadata-system.R:3079:1', 'test-metadata-system.R:3087:1',
'test-metadata-system.R:3095:1', 'test-metadata-system.R:3110:1',
'test-metadata-system.R:3128:1', 'test-metadata-system.R:3146:1',
'test-metadata-system.R:3164:1', 'test-metadata-system.R:3179:1',
'test-metadata-system.R:3356:1', 'test-metadata-system.R:3364:1',
'test-metadata-system.R:3372:1', 'test-metadata-system.R:3390:1',
'test-metadata-system.R:3408:1', 'test-metadata-system.R:3426:1',
'test-metadata-system.R:3441:1', 'test-metadata-system.R:3506:1',
'test-metadata-system.R:3517:1', 'test-methods-print.R:107:1',
'test-methods-print.R:118:1', 'test-methods-print.R:224:1',
'test-methods-print.R:235:1', 'test-methods-print.R:255:1',
'test-methods-print.R:266:1', 'test-methods-print.R:286:1',
'test-methods-print.R:331:1', 'test-methods-print.R:348:1',
'test-methods-print.R:375:1', 'test-methods-print.R:386:1',
'test-methods-print.R:398:1', 'test-methods-print.R:410:1',
'test-methods-print.R:421:1', 'test-methods-print.R:432:1',
'test-methods-print.R:447:1', 'test-methods-print.R:462:1',
'test-methods-print.R:652:1', 'test-methods-print.R:680:1',
'test-methods-print.R:702:1', 'test-methods-print.R:723:1',
'test-methods-print.R:736:1', 'test-methods-print.R:749:1',
'test-methods-print.R:756:1', 'test-methods-print.R:866:1',
'test-methods-print.R:878:1', 'test-methods-print.R:891:1',
'test-methods-print.R:904:1', 'test-methods-print.R:964:1',
'test-methods-print.R:976:1', 'test-methods-print.R:989:1',
'test-methods-print.R:1002:1', 'test-nonprob-bootstrap-variance.R:585:1',
'test-sata-detection.R:178:1', 'test-sata-detection.R:193:1',
'test-sata-detection.R:211:1', 'test-survey-collection-dispatch.R:319:1',
'test-survey-collection-dispatch.R:343:1',
'test-survey-collection-dispatch.R:366:1',
'test-survey-collection-dispatch.R:379:1',
'test-survey-collection-dispatch.R:389:1',
'test-survey-collection-dispatch.R:399:1',
'test-survey-collection-dispatch.R:424:1',
'test-survey-collection-dispatch.R:446:1',
'test-survey-collection-dispatch.R:559:1',
'test-survey-collection-dispatch.R:819:1', 'test-survey-collection.R:187:1',
'test-survey-collection.R:236:1', 'test-survey-collection.R:381:1',
'test-survey-collection.R:455:1', 'test-survey-collection.R:714:1',
'test-survey-collection.R:742:1', 'test-survey-collection.R:1008:1',
'test-survey-collection.R:1014:1', 'test-survey-collection.R:1025:1',
'test-update-design.R:284:1', 'test-utils.R:640:1',
'test-validators.R:354:1', 'test-validators.R:376:1',
'test-validators.R:398:1', 'test-variance-taylor.R:308:1',
'test-variance-twophase.R:5:1', 'test-variance-vendored-saddlepoint.R:9:1'
• Set SURVEYCORE_EXTENDED_TESTS=true to run extended tests (1):
'test-srr-compliance.R:294:3'
• {MASS} is not installed (1): 'test-calibration.R:633:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-analysis-diffs-helpers.R:478:3'): .extract_me_estimates() with groups: result_groups is a data.frame ──
Expected `nrow(result$result_groups)` to equal 4L.
Differences:
`actual`: 3
`expected`: 4
── Failure ('test-analysis-diffs-helpers.R:668:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ──
Expected `nrow(out$groups_df)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Failure ('test-analysis-diffs-helpers.R:669:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ──
Expected `length(out$col_vecs[["treats"]])` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Error ('test-analysis-diffs-helpers.R:858:3'): .build_diffs_output() p-value adjustment with groups: adjusts within each group ──
Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:858:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs-helpers.R:1038:3'): .build_diffs_output() pct_change with show_means = FALSE + grouped ME + show_pct_change = TRUE: pct_change computed (not NA) ──
Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1038:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs-helpers.R:1334:3'): .build_diffs_output() grouped path with pct_change: group combo loop hits has_group branch ──
Error in `if (grp_ok) { ref_mean_val <- all_rows[[ri]]$mean break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1334:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Failure ('test-analysis-diffs.R:471:3'): get_diffs() with group produces grouped output ──
Expected `nrow(result)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Failure ('test-analysis-diffs.R:490:3'): get_diffs() with covariates and group ──
Expected `nrow(result)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Error ('test-analysis-diffs.R:562:3'): get_diffs() pval_adj with group adjusts within groups ──
Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:562:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore::get_diffs(...)
4. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs.R:1026:3'): get_diffs() pct_change is non-NA with show_means = FALSE (grouped) ──
Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:1026:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore::get_diffs(...)
4. └─surveycore:::.build_diffs_output(...)
[ FAIL 10 | WARN 335 | SKIP 426 | PASS 11128 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [175s/192s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(surveycore)
>
> test_check("surveycore")
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
# A survey_diffs result
# Design: Taylor series | Family: gaussian (identity)
# DV: y | Treatment: arm (ref: Ctrl)
# Method: coefficient / intercept
# A <survey_diffs> [2 × 4]
# A tibble: 2 x 4
arm estimate mean n
<fct> <dbl> <dbl> <int>
1 Ctrl 0 0.5 100
2 T1 0.05 0.55 100
Saving _problems/test-analysis-diffs-helpers-478.R
Saving _problems/test-analysis-diffs-helpers-668.R
Saving _problems/test-analysis-diffs-helpers-669.R
Saving _problems/test-analysis-diffs-helpers-876.R
Saving _problems/test-analysis-diffs-helpers-1056.R
Saving _problems/test-analysis-diffs-helpers-1352.R
Saving _problems/test-analysis-diffs-471.R
Saving _problems/test-analysis-diffs-490.R
Saving _problems/test-analysis-diffs-569.R
Saving _problems/test-analysis-diffs-1034.R
# A survey_t_test result
# Design: Taylor series | N: 400
# DV: outcome | By: grp2 (A vs. B)
# A <tbl_df> [1 × 13]
# A tibble: 1 x 13
level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat df
<chr> <chr> <dbl> <dbl> <dbl> <int> <int> <dbl> <dbl> <dbl> <dbl>
1 A B 3.51 50.9 54.4 209 191 1.16 5.86 3.18 15
# i 2 more variables: p_value <dbl>, stars <chr>
# A survey_pairwise result
# Design: Taylor series | N: 400
# DV: outcome | By: grp3 (3 levels, 3 pairs)
# Adjustment: holm
# A <tbl_df> [3 × 13]
# A tibble: 3 x 13
level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat
<chr> <chr> <dbl> <dbl> <dbl> <int> <int> <dbl> <dbl> <dbl>
1 X Y -0.910 53.1 52.2 145 136 -3.59 1.77 -0.725
2 X Z -0.847 53.1 52.3 145 119 -3.77 2.08 -0.617
3 Y Z 0.0631 52.2 52.3 136 119 -2.78 2.91 0.0473
# i 3 more variables: df <dbl>, p_value <dbl>, stars <chr>
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
-- Survey Design ---------------------------------------------------------------
<survey_nonprob> (non-probability) [experimental]
* Variance: SRS approximation (no bootstrap replicate weights)
Sample size: 10
# A tibble: 10 x 2
y w
<int> <dbl>
1 1 1
2 2 1
3 3 1
4 4 1
5 5 1
6 6 1
7 7 1
8 8 1
9 9 1
10 10 1
-- Survey Design Summary -------------------------------------------------------
Type: non-probability [experimental]
Sample size: 10
Weighted N: 10
-- Design --
Weights: w
* Range: 1 – 1
* Mean: 1
* CV: 0
Calibration provenance: none stored
Metadata: 0 of 2 variable(s) labeled
Survey-weighted GLM
Family: gaussian (identity link)
Formula: y1 ~ y2 + y3
Design: Taylor series
Coefficients:
(Intercept) y2 y3
51.1868 -0.0624 -2.6042
Degrees of freedom: 16 (design-based)
Survey-weighted GLM
Call:
survey_glm(design = .glm_taylor(), formula = y1 ~ y2 + y3)
Deviance Residuals:
Min 1Q Median 3Q Max
-93.3797 -18.7253 -0.4633 22.9540 75.4878
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 51.1868 0.7268 70.4262 0.0000 ***
y2 -0.0624 0.8308 -0.0752 0.9412
y3 -2.6042 1.4802 -1.7594 0.1003
---
Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
(Dispersion parameter for gaussian family taken to be 986.9)
Null deviance: 197426 on 199 degrees of freedom
Residual deviance: 194412 on 197 degrees of freedom
AIC: 1492
Design df: 16 (taylor)
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
# i 49 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 10
psu strata fpc wt y1 y2 y3 group prob ..surveycore_wt..
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl>
1 psu_1 stratum~ 378 14.3 50.9 -0.122 1 A 0.0701 14.3
2 psu_1 stratum~ 378 21.8 20.1 0.188 0 B 0.0459 21.8
3 psu_1 stratum~ 378 14.4 52.8 0.119 1 B 0.0697 14.4
4 psu_2 stratum~ 378 18.9 46.3 -0.0251 0 A 0.0530 18.9
5 psu_2 stratum~ 378 23.0 51.9 0.108 0 B 0.0435 23.0
6 psu_2 stratum~ 378 11.0 55.8 -0.485 0 C 0.0908 11.0
7 psu_2 stratum~ 378 13.8 64.0 -0.504 0 A 0.0727 13.8
8 psu_2 stratum~ 378 14.2 42.7 -1.66 0 B 0.0706 14.2
9 psu_3 stratum~ 378 16.5 63.0 -0.382 1 C 0.0606 16.5
10 psu_3 stratum~ 378 13.7 53.4 -0.513 1 A 0.0728 13.7
# i 40 more rows
# A tibble: 30 x 9
psu strata fpc wt y1 y2 y3 group ..surveycore_wt..
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <int>
1 psu_1 stratum_1 218 14.3 41.5 1.04 1 B 1
2 psu_1 stratum_1 218 21.8 25.9 0.921 1 B 1
3 psu_2 stratum_1 218 14.4 50.4 0.721 0 B 1
4 psu_2 stratum_1 218 18.9 52.1 -1.04 1 A 1
5 psu_2 stratum_1 218 23.0 46.4 -0.0902 0 A 1
6 psu_3 stratum_1 218 11.0 57.6 0.624 0 C 1
7 psu_3 stratum_1 218 13.7 42.7 -0.954 0 B 1
8 psu_4 stratum_1 218 14.2 36.3 -0.543 0 B 1
9 psu_4 stratum_1 218 16.5 54.3 0.581 0 C 1
10 psu_4 stratum_1 218 13.7 41.9 0.768 0 C 1
# i 20 more rows
# A tibble: 50 x 13
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
# i 49 more rows
# i 2 more variables: repwt_4 <dbl>, repwt_5 <dbl>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
# i 59 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 50 x 13
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8
# i 40 more rows
# i 2 more variables: repwt_4 <dbl>, repwt_5 <dbl>
# A tibble: 50 x 14
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8
# i 40 more rows
# i 3 more variables: repwt_4 <dbl>, repwt_5 <dbl>, fpc_rep <int>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687
3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687
4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687
5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687
6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687
7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687
8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687
9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687
10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687
# i 50 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687
3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687
4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687
5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687
6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687
7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687
8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687
9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687
10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687
# i 50 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 30 x 2
y w
<dbl> <dbl>
1 0.828 2.00
2 0.0757 1.11
3 0.126 1.85
4 2.27 1.22
5 -0.838 1.30
6 -0.469 1.48
7 0.0155 1.20
8 0.961 1.41
9 -0.281 0.965
10 0.0697 1.51
# i 20 more rows
# A tibble: 100 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 538 11.6 50.9 -1.43 0 C FALSE 0.0967
2 psu_1 stratum_1 538 12.0 46.7 -0.718 0 C FALSE 0.0967
3 psu_1 stratum_1 538 12.1 42.0 0.205 1 A TRUE 0.0967
4 psu_1 stratum_1 538 11.6 30.8 -1.90 0 A FALSE 0.0967
5 psu_1 stratum_1 538 9.12 53.7 -0.449 0 A FALSE 0.0967
6 psu_1 stratum_1 538 10.3 56.6 0.523 0 B TRUE 0.0967
7 psu_1 stratum_1 538 9.43 69.5 -0.123 0 C FALSE 0.0967
8 psu_1 stratum_1 538 10.7 55.8 -1.11 1 B TRUE 0.0967
9 psu_1 stratum_1 538 10.5 39.5 -0.774 1 C FALSE 0.0967
10 psu_1 stratum_1 538 10.1 39.8 0.615 0 C FALSE 0.0967
# i 90 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 2
y wt
<int> <dbl>
1 1 1
2 2 1
3 3 1
4 4 1
5 5 1
6 6 1
7 7 1
8 8 1
9 9 1
10 10 1
-- Survey Design ---------------------------------------------------------------
<survey_nonprob> (non-probability, JK1, 4 replicates) [experimental]
Sample size: 10
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
i Skipped 1 survey missing the requested variable: "only".
[ FAIL 10 | WARN 335 | SKIP 426 | PASS 11128 ]
══ Skipped tests (426) ═════════════════════════════════════════════════════════
• A-13 trigger requires careful numerical construction; tracked for follow-up
PR (1): 'test-glm-anova.R:531:3'
• A-20 requires a hand-built fit whose @design@data domain column differs from
the refit's; deferred to follow-up PR (1): 'test-glm-anova.R:481:3'
• On CRAN (422): 'test-analysis-corr-latent-primitives.R:74:1',
'test-analysis-corr-latent-primitives.R:97:1',
'test-analysis-corr-latent-primitives.R:152:1',
'test-analysis-corr-latent-primitives.R:348:1',
'test-analysis-corr-latent-primitives.R:482:1',
'test-analysis-corr-latent-primitives.R:741:1',
'test-analysis-corr-latent-variance.R:14:1',
'test-analysis-corr-latent.R:20:1', 'test-analysis-corr.R:809:1',
'test-analysis-corr.R:817:1', 'test-analysis-corr.R:1231:1',
'test-analysis-corr.R:1646:1', 'test-analysis-corr.R:1664:1',
'test-analysis-covariance.R:690:1', 'test-analysis-covariance.R:699:1',
'test-analysis-covariance.R:712:1', 'test-analysis-covariance.R:734:1',
'test-analysis-covariance.R:747:1', 'test-analysis-covariance.R:768:1',
'test-analysis-covariance.R:785:1', 'test-analysis-covariance.R:798:1',
'test-analysis-covariance.R:819:1', 'test-analysis-covariance.R:851:1',
'test-analysis-covariance.R:884:1', 'test-analysis-covariance.R:924:1',
'test-analysis-covariance.R:1131:1', 'test-analysis-covariance.R:1154:1',
'test-analysis-covariance.R:1176:1', 'test-analysis-diffs-helpers.R:147:1',
'test-analysis-diffs-helpers.R:388:1',
'test-analysis-diffs-marginaleffects.R:6:1',
'test-analysis-diffs-numerical.R:6:1', 'test-analysis-diffs.R:30:1',
'test-analysis-diffs.R:39:1', 'test-analysis-diffs.R:48:1',
'test-analysis-diffs.R:57:1', 'test-analysis-diffs.R:66:1',
'test-analysis-diffs.R:77:1', 'test-analysis-diffs.R:89:1',
'test-analysis-diffs.R:101:1', 'test-analysis-diffs.R:435:1',
'test-analysis-diffs.R:765:1', 'test-analysis-diffs.R:774:1',
'test-analysis-diffs.R:783:1', 'test-analysis-diffs.R:792:1',
'test-analysis-diffs.R:801:1', 'test-analysis-diffs.R:810:1',
'test-analysis-freqs.R:578:1', 'test-analysis-freqs.R:589:1',
'test-analysis-freqs.R:610:1', 'test-analysis-freqs.R:631:1',
'test-analysis-freqs.R:652:1', 'test-analysis-freqs.R:1255:1',
'test-analysis-freqs.R:1499:1', 'test-analysis-helpers.R:59:1',
'test-analysis-helpers.R:77:1', 'test-analysis-helpers.R:110:1',
'test-analysis-helpers.R:398:1', 'test-analysis-helpers.R:754:1',
'test-analysis-helpers.R:1113:1', 'test-analysis-helpers.R:1153:1',
'test-analysis-helpers.R:1462:1', 'test-analysis-means.R:320:1',
'test-analysis-means.R:349:1', 'test-analysis-means.R:812:1',
'test-analysis-quantiles.R:716:1', 'test-analysis-quantiles.R:724:1',
'test-analysis-quantiles.R:759:1', 'test-analysis-quantiles.R:771:1',
'test-analysis-quantiles.R:1095:1', 'test-analysis-ratios.R:578:1',
'test-analysis-ratios.R:588:1', 'test-analysis-ratios.R:598:1',
'test-analysis-ratios.R:608:1', 'test-analysis-ratios.R:1040:1',
'test-analysis-t-test-numerical.R:6:1', 'test-analysis-t-test.R:285:1',
'test-analysis-t-test.R:310:1', 'test-analysis-t-test.R:319:1',
'test-analysis-t-test.R:328:1', 'test-analysis-t-test.R:340:1',
'test-analysis-t-test.R:352:1', 'test-analysis-t-test.R:364:1',
'test-analysis-t-test.R:377:1', 'test-analysis-t-test.R:393:1',
'test-analysis-t-test.R:402:1', 'test-analysis-t-test.R:414:1',
'test-analysis-t-test.R:426:1', 'test-analysis-t-test.R:754:1',
'test-analysis-t-test.R:820:1', 'test-analysis-t-test.R:831:1',
'test-analysis-totals.R:301:1', 'test-analysis-totals.R:320:1',
'test-analysis-totals.R:624:1', 'test-analysis-variance-collection.R:122:1',
'test-analysis-variance-collection.R:146:1',
'test-analysis-variance-collection.R:169:1',
'test-analysis-variance-collection.R:182:1',
'test-analysis-variance-twophase-nonprob.R:9:1',
'test-analysis-variance.R:598:1', 'test-analysis-variance.R:608:1',
'test-analysis-variance.R:622:1', 'test-analysis-variance.R:634:1',
'test-analysis-variance.R:646:1', 'test-analysis-variance.R:657:1',
'test-analysis-variance.R:676:1', 'test-analysis-variance.R:691:1',
'test-analysis-variance.R:705:1', 'test-calibration.R:73:1',
'test-calibration.R:84:1', 'test-calibration.R:96:1',
'test-calibration.R:108:1', 'test-calibration.R:120:1',
'test-calibration.R:132:1', 'test-calibration.R:144:1',
'test-calibration.R:156:1', 'test-calibration.R:170:1',
'test-calibration.R:182:1', 'test-calibration.R:194:1',
'test-calibration.R:207:1', 'test-calibration.R:223:1',
'test-calibration.R:238:1', 'test-calibration.R:264:1',
'test-calibration.R:737:1', 'test-calibration.R:748:1',
'test-calibration.R:762:1', 'test-calibration.R:776:1',
'test-calibration.R:788:1', 'test-calibration.R:802:1',
'test-calibration.R:840:1', 'test-calibration.R:854:1',
'test-calibration.R:866:1', 'test-calibration.R:878:1',
'test-calibration.R:893:1', 'test-calibration.R:906:1',
'test-calibration.R:919:1', 'test-calibration.R:949:1',
'test-calibration.R:974:1', 'test-calibration.R:1002:1',
'test-collection-groups.R:352:1', 'test-collection-groups.R:362:1',
'test-collection-groups.R:375:1', 'test-collection-groups.R:411:1',
'test-collection-groups.R:549:1', 'test-collection-groups.R:556:1',
'test-constructors.R:145:1', 'test-constructors.R:161:1',
'test-constructors.R:171:1', 'test-constructors.R:189:1',
'test-constructors.R:199:1', 'test-constructors.R:259:1',
'test-constructors.R:272:1', 'test-constructors.R:302:1',
'test-constructors.R:329:1', 'test-constructors.R:347:1',
'test-constructors.R:361:1', 'test-constructors.R:730:1',
'test-constructors.R:752:1', 'test-constructors.R:827:1',
'test-constructors.R:850:1', 'test-constructors.R:1145:1',
'test-constructors.R:1159:1', 'test-constructors.R:1200:1',
'test-constructors.R:1211:1', 'test-constructors.R:1227:1',
'test-constructors.R:1243:1', 'test-constructors.R:1265:1',
'test-constructors.R:1613:1', 'test-constructors.R:1624:1',
'test-constructors.R:1636:1', 'test-constructors.R:1648:1',
'test-constructors.R:1660:1', 'test-constructors.R:1672:1',
'test-constructors.R:1738:1', 'test-constructors.R:1744:1',
'test-constructors.R:1750:1', 'test-constructors.R:1756:1',
'test-constructors.R:1762:1', 'test-constructors.R:1769:1',
'test-constructors.R:1917:1', 'test-constructors.R:2079:1',
'test-constructors.R:2091:1', 'test-constructors.R:2103:1',
'test-constructors.R:2115:1', 'test-constructors.R:2137:1',
'test-constructors.R:2159:1', 'test-constructors.R:2181:1',
'test-constructors.R:2193:1', 'test-constructors.R:2216:1',
'test-constructors.R:2289:1', 'test-constructors.R:2316:1',
'test-constructors.R:2343:1', 'test-constructors.R:2497:1',
'test-constructors.R:2524:1', 'test-constructors.R:2551:1',
'test-constructors.R:2648:1', 'test-constructors.R:2686:1',
'test-constructors.R:2710:1', 'test-constructors.R:2734:1',
'test-constructors.R:2757:1', 'test-constructors.R:2781:1',
'test-constructors.R:2891:1', 'test-constructors.R:2906:1',
'test-constructors.R:2921:1', 'test-constructors.R:2940:1',
'test-constructors.R:2959:1', 'test-constructors.R:2978:1',
'test-constructors.R:3009:1', 'test-constructors.R:3021:1',
'test-constructors.R:3035:1', 'test-constructors.R:3050:1',
'test-constructors.R:3067:1', 'test-effective-n.R:212:1',
'test-effective-n.R:220:1', 'test-effective-n.R:229:1',
'test-effective-n.R:444:1', 'test-effective-n.R:452:1',
'test-effective-n.R:460:1', 'test-effective-n.R:468:1',
'test-glm-anova-dispatch.R:270:1', 'test-glm-anova-dispatch.R:274:1',
'test-glm-anova-dispatch.R:280:1', 'test-glm-anova-dispatch.R:284:1',
'test-glm-anova-dispatch.R:289:1', 'test-glm-anova-dispatch.R:295:1',
'test-glm-anova-numerical.R:18:1', 'test-glm-anova.R:353:1',
'test-glm-anova.R:361:1', 'test-glm-anova.R:374:1', 'test-glm-anova.R:398:1',
'test-glm-anova.R:412:1', 'test-glm-anova.R:426:1', 'test-glm-anova.R:436:1',
'test-glm-anova.R:694:1', 'test-glm-anova.R:700:1', 'test-glm-anova.R:709:1',
'test-glm-anova.R:811:1', 'test-glm-anova.R:822:1', 'test-glm-anova.R:833:1',
'test-glm-anova.R:859:1', 'test-glm-anova.R:871:1', 'test-glm-anova.R:919:1',
'test-glm-marginaleffects.R:9:1', 'test-glm-methods.R:52:1',
'test-glm-methods.R:109:1', 'test-glm-methods.R:115:1',
'test-glm-methods.R:205:1', 'test-glm-methods.R:289:1',
'test-glm-methods.R:299:1', 'test-glm-methods.R:312:1',
'test-glm-methods.R:325:1', 'test-glm-methods.R:392:1',
'test-glm-methods.R:424:1', 'test-glm-methods.R:449:1',
'test-glm-methods.R:474:1', 'test-glm-methods.R:526:1',
'test-glm-methods.R:548:1', 'test-glm-methods.R:575:1',
'test-glm-methods.R:584:1', 'test-glm-methods.R:611:1',
'test-glm-methods.R:660:1', 'test-glm-methods.R:675:1',
'test-glm-numerical.R:14:1', 'test-glm.R:128:1', 'test-glm.R:177:1',
'test-glm.R:186:1', 'test-glm.R:196:1', 'test-glm.R:206:1',
'test-glm.R:219:1', 'test-glm.R:229:1', 'test-glm.R:239:1',
'test-glm.R:249:1', 'test-glm.R:261:1', 'test-glm.R:273:1',
'test-glm.R:309:1', 'test-glm.R:325:1', 'test-glm.R:1007:1',
'test-glm.R:1015:1', 'test-glm.R:1288:1', 'test-metadata-infer.R:408:1',
'test-metadata-system.R:187:1', 'test-metadata-system.R:709:1',
'test-metadata-system.R:713:1', 'test-metadata-system.R:721:1',
'test-metadata-system.R:726:1', 'test-metadata-system.R:734:1',
'test-metadata-system.R:739:1', 'test-metadata-system.R:744:1',
'test-metadata-system.R:749:1', 'test-metadata-system.R:925:1',
'test-metadata-system.R:930:1', 'test-metadata-system.R:935:1',
'test-metadata-system.R:939:1', 'test-metadata-system.R:944:1',
'test-metadata-system.R:952:1', 'test-metadata-system.R:960:1',
'test-metadata-system.R:965:1', 'test-metadata-system.R:1107:1',
'test-metadata-system.R:1114:1', 'test-metadata-system.R:1119:1',
'test-metadata-system.R:1127:1', 'test-metadata-system.R:1132:1',
'test-metadata-system.R:1140:1', 'test-metadata-system.R:1145:1',
'test-metadata-system.R:1278:1', 'test-metadata-system.R:1282:1',
'test-metadata-system.R:1290:1', 'test-metadata-system.R:1295:1',
'test-metadata-system.R:1303:1', 'test-metadata-system.R:1308:1',
'test-metadata-system.R:1313:1', 'test-metadata-system.R:1439:1',
'test-metadata-system.R:1443:1', 'test-metadata-system.R:1448:1',
'test-metadata-system.R:1456:1', 'test-metadata-system.R:1461:1',
'test-metadata-system.R:1469:1', 'test-metadata-system.R:1474:1',
'test-metadata-system.R:1623:1', 'test-metadata-system.R:1628:1',
'test-metadata-system.R:1635:1', 'test-metadata-system.R:1643:1',
'test-metadata-system.R:1648:1', 'test-metadata-system.R:1660:1',
'test-metadata-system.R:1665:1', 'test-metadata-system.R:1887:1',
'test-metadata-system.R:2040:1', 'test-metadata-system.R:2054:1',
'test-metadata-system.R:2068:1', 'test-metadata-system.R:2082:1',
'test-metadata-system.R:2202:1', 'test-metadata-system.R:2438:1',
'test-metadata-system.R:2442:1', 'test-metadata-system.R:2622:1',
'test-metadata-system.R:2630:1', 'test-metadata-system.R:2648:1',
'test-metadata-system.R:2663:1', 'test-metadata-system.R:2678:1',
'test-metadata-system.R:2858:1', 'test-metadata-system.R:2866:1',
'test-metadata-system.R:2881:1', 'test-metadata-system.R:2896:1',
'test-metadata-system.R:3079:1', 'test-metadata-system.R:3087:1',
'test-metadata-system.R:3095:1', 'test-metadata-system.R:3110:1',
'test-metadata-system.R:3128:1', 'test-metadata-system.R:3146:1',
'test-metadata-system.R:3164:1', 'test-metadata-system.R:3179:1',
'test-metadata-system.R:3356:1', 'test-metadata-system.R:3364:1',
'test-metadata-system.R:3372:1', 'test-metadata-system.R:3390:1',
'test-metadata-system.R:3408:1', 'test-metadata-system.R:3426:1',
'test-metadata-system.R:3441:1', 'test-metadata-system.R:3506:1',
'test-metadata-system.R:3517:1', 'test-methods-print.R:107:1',
'test-methods-print.R:118:1', 'test-methods-print.R:224:1',
'test-methods-print.R:235:1', 'test-methods-print.R:255:1',
'test-methods-print.R:266:1', 'test-methods-print.R:286:1',
'test-methods-print.R:331:1', 'test-methods-print.R:348:1',
'test-methods-print.R:375:1', 'test-methods-print.R:386:1',
'test-methods-print.R:398:1', 'test-methods-print.R:410:1',
'test-methods-print.R:421:1', 'test-methods-print.R:432:1',
'test-methods-print.R:447:1', 'test-methods-print.R:462:1',
'test-methods-print.R:652:1', 'test-methods-print.R:680:1',
'test-methods-print.R:702:1', 'test-methods-print.R:723:1',
'test-methods-print.R:736:1', 'test-methods-print.R:749:1',
'test-methods-print.R:756:1', 'test-methods-print.R:866:1',
'test-methods-print.R:878:1', 'test-methods-print.R:891:1',
'test-methods-print.R:904:1', 'test-methods-print.R:964:1',
'test-methods-print.R:976:1', 'test-methods-print.R:989:1',
'test-methods-print.R:1002:1', 'test-nonprob-bootstrap-variance.R:585:1',
'test-sata-detection.R:178:1', 'test-sata-detection.R:193:1',
'test-sata-detection.R:211:1', 'test-survey-collection-dispatch.R:319:1',
'test-survey-collection-dispatch.R:343:1',
'test-survey-collection-dispatch.R:366:1',
'test-survey-collection-dispatch.R:379:1',
'test-survey-collection-dispatch.R:389:1',
'test-survey-collection-dispatch.R:399:1',
'test-survey-collection-dispatch.R:424:1',
'test-survey-collection-dispatch.R:446:1',
'test-survey-collection-dispatch.R:559:1',
'test-survey-collection-dispatch.R:819:1', 'test-survey-collection.R:187:1',
'test-survey-collection.R:236:1', 'test-survey-collection.R:381:1',
'test-survey-collection.R:455:1', 'test-survey-collection.R:714:1',
'test-survey-collection.R:742:1', 'test-survey-collection.R:1008:1',
'test-survey-collection.R:1014:1', 'test-survey-collection.R:1025:1',
'test-update-design.R:284:1', 'test-utils.R:640:1',
'test-validators.R:354:1', 'test-validators.R:376:1',
'test-validators.R:398:1', 'test-variance-taylor.R:308:1',
'test-variance-twophase.R:5:1', 'test-variance-vendored-saddlepoint.R:9:1'
• Set SURVEYCORE_EXTENDED_TESTS=true to run extended tests (1):
'test-srr-compliance.R:294:3'
• {MASS} is not installed (1): 'test-calibration.R:633:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-analysis-diffs-helpers.R:478:3'): .extract_me_estimates() with groups: result_groups is a data.frame ──
Expected `nrow(result$result_groups)` to equal 4L.
Differences:
`actual`: 3
`expected`: 4
── Failure ('test-analysis-diffs-helpers.R:668:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ──
Expected `nrow(out$groups_df)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Failure ('test-analysis-diffs-helpers.R:669:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ──
Expected `length(out$col_vecs[["treats"]])` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Error ('test-analysis-diffs-helpers.R:858:3'): .build_diffs_output() p-value adjustment with groups: adjusts within each group ──
Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:858:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs-helpers.R:1038:3'): .build_diffs_output() pct_change with show_means = FALSE + grouped ME + show_pct_change = TRUE: pct_change computed (not NA) ──
Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1038:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs-helpers.R:1334:3'): .build_diffs_output() grouped path with pct_change: group combo loop hits has_group branch ──
Error in `if (grp_ok) { ref_mean_val <- all_rows[[ri]]$mean break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1334:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Failure ('test-analysis-diffs.R:471:3'): get_diffs() with group produces grouped output ──
Expected `nrow(result)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Failure ('test-analysis-diffs.R:490:3'): get_diffs() with covariates and group ──
Expected `nrow(result)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Error ('test-analysis-diffs.R:562:3'): get_diffs() pval_adj with group adjusts within groups ──
Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:562:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore::get_diffs(...)
4. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs.R:1026:3'): get_diffs() pct_change is non-NA with show_means = FALSE (grouped) ──
Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:1026:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore::get_diffs(...)
4. └─surveycore:::.build_diffs_output(...)
[ FAIL 10 | WARN 335 | SKIP 426 | PASS 11128 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [173s/204s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(surveycore)
>
> test_check("surveycore")
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
# A survey_diffs result
# Design: Taylor series | Family: gaussian (identity)
# DV: y | Treatment: arm (ref: Ctrl)
# Method: coefficient / intercept
# A <survey_diffs> [2 × 4]
# A tibble: 2 x 4
arm estimate mean n
<fct> <dbl> <dbl> <int>
1 Ctrl 0 0.5 100
2 T1 0.05 0.55 100
Saving _problems/test-analysis-diffs-helpers-478.R
Saving _problems/test-analysis-diffs-helpers-668.R
Saving _problems/test-analysis-diffs-helpers-669.R
Saving _problems/test-analysis-diffs-helpers-876.R
Saving _problems/test-analysis-diffs-helpers-1056.R
Saving _problems/test-analysis-diffs-helpers-1352.R
Saving _problems/test-analysis-diffs-471.R
Saving _problems/test-analysis-diffs-490.R
Saving _problems/test-analysis-diffs-569.R
Saving _problems/test-analysis-diffs-1034.R
# A survey_t_test result
# Design: Taylor series | N: 400
# DV: outcome | By: grp2 (A vs. B)
# A <tbl_df> [1 × 13]
# A tibble: 1 x 13
level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat df
<chr> <chr> <dbl> <dbl> <dbl> <int> <int> <dbl> <dbl> <dbl> <dbl>
1 A B 3.51 50.9 54.4 209 191 1.16 5.86 3.18 15
# i 2 more variables: p_value <dbl>, stars <chr>
# A survey_pairwise result
# Design: Taylor series | N: 400
# DV: outcome | By: grp3 (3 levels, 3 pairs)
# Adjustment: holm
# A <tbl_df> [3 × 13]
# A tibble: 3 x 13
level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat
<chr> <chr> <dbl> <dbl> <dbl> <int> <int> <dbl> <dbl> <dbl>
1 X Y -0.910 53.1 52.2 145 136 -3.59 1.77 -0.725
2 X Z -0.847 53.1 52.3 145 119 -3.77 2.08 -0.617
3 Y Z 0.0631 52.2 52.3 136 119 -2.78 2.91 0.0473
# i 3 more variables: df <dbl>, p_value <dbl>, stars <chr>
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
-- Survey Design ---------------------------------------------------------------
<survey_nonprob> (non-probability) [experimental]
* Variance: SRS approximation (no bootstrap replicate weights)
Sample size: 10
# A tibble: 10 x 2
y w
<int> <dbl>
1 1 1
2 2 1
3 3 1
4 4 1
5 5 1
6 6 1
7 7 1
8 8 1
9 9 1
10 10 1
-- Survey Design Summary -------------------------------------------------------
Type: non-probability [experimental]
Sample size: 10
Weighted N: 10
-- Design --
Weights: w
* Range: 1 – 1
* Mean: 1
* CV: 0
Calibration provenance: none stored
Metadata: 0 of 2 variable(s) labeled
Survey-weighted GLM
Family: gaussian (identity link)
Formula: y1 ~ y2 + y3
Design: Taylor series
Coefficients:
(Intercept) y2 y3
51.1868 -0.0624 -2.6042
Degrees of freedom: 16 (design-based)
Survey-weighted GLM
Call:
survey_glm(design = .glm_taylor(), formula = y1 ~ y2 + y3)
Deviance Residuals:
Min 1Q Median 3Q Max
-93.3797 -18.7253 -0.4633 22.9540 75.4878
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 51.1868 0.7268 70.4262 0.0000 ***
y2 -0.0624 0.8308 -0.0752 0.9412
y3 -2.6042 1.4802 -1.7594 0.1003
---
Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
(Dispersion parameter for gaussian family taken to be 986.9)
Null deviance: 197426 on 199 degrees of freedom
Residual deviance: 194412 on 197 degrees of freedom
AIC: 1492
Design df: 16 (taylor)
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
# i 49 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 10
psu strata fpc wt y1 y2 y3 group prob ..surveycore_wt..
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl>
1 psu_1 stratum~ 378 14.3 50.9 -0.122 1 A 0.0701 14.3
2 psu_1 stratum~ 378 21.8 20.1 0.188 0 B 0.0459 21.8
3 psu_1 stratum~ 378 14.4 52.8 0.119 1 B 0.0697 14.4
4 psu_2 stratum~ 378 18.9 46.3 -0.0251 0 A 0.0530 18.9
5 psu_2 stratum~ 378 23.0 51.9 0.108 0 B 0.0435 23.0
6 psu_2 stratum~ 378 11.0 55.8 -0.485 0 C 0.0908 11.0
7 psu_2 stratum~ 378 13.8 64.0 -0.504 0 A 0.0727 13.8
8 psu_2 stratum~ 378 14.2 42.7 -1.66 0 B 0.0706 14.2
9 psu_3 stratum~ 378 16.5 63.0 -0.382 1 C 0.0606 16.5
10 psu_3 stratum~ 378 13.7 53.4 -0.513 1 A 0.0728 13.7
# i 40 more rows
# A tibble: 30 x 9
psu strata fpc wt y1 y2 y3 group ..surveycore_wt..
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <int>
1 psu_1 stratum_1 218 14.3 41.5 1.04 1 B 1
2 psu_1 stratum_1 218 21.8 25.9 0.921 1 B 1
3 psu_2 stratum_1 218 14.4 50.4 0.721 0 B 1
4 psu_2 stratum_1 218 18.9 52.1 -1.04 1 A 1
5 psu_2 stratum_1 218 23.0 46.4 -0.0902 0 A 1
6 psu_3 stratum_1 218 11.0 57.6 0.624 0 C 1
7 psu_3 stratum_1 218 13.7 42.7 -0.954 0 B 1
8 psu_4 stratum_1 218 14.2 36.3 -0.543 0 B 1
9 psu_4 stratum_1 218 16.5 54.3 0.581 0 C 1
10 psu_4 stratum_1 218 13.7 41.9 0.768 0 C 1
# i 20 more rows
# A tibble: 50 x 13
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
# i 49 more rows
# i 2 more variables: repwt_4 <dbl>, repwt_5 <dbl>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
# i 59 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 50 x 13
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8
# i 40 more rows
# i 2 more variables: repwt_4 <dbl>, repwt_5 <dbl>
# A tibble: 50 x 14
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8
# i 40 more rows
# i 3 more variables: repwt_4 <dbl>, repwt_5 <dbl>, fpc_rep <int>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687
3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687
4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687
5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687
6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687
7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687
8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687
9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687
10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687
# i 50 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687
3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687
4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687
5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687
6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687
7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687
8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687
9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687
10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687
# i 50 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 30 x 2
y w
<dbl> <dbl>
1 0.828 2.00
2 0.0757 1.11
3 0.126 1.85
4 2.27 1.22
5 -0.838 1.30
6 -0.469 1.48
7 0.0155 1.20
8 0.961 1.41
9 -0.281 0.965
10 0.0697 1.51
# i 20 more rows
# A tibble: 100 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 538 11.6 50.9 -1.43 0 C FALSE 0.0967
2 psu_1 stratum_1 538 12.0 46.7 -0.718 0 C FALSE 0.0967
3 psu_1 stratum_1 538 12.1 42.0 0.205 1 A TRUE 0.0967
4 psu_1 stratum_1 538 11.6 30.8 -1.90 0 A FALSE 0.0967
5 psu_1 stratum_1 538 9.12 53.7 -0.449 0 A FALSE 0.0967
6 psu_1 stratum_1 538 10.3 56.6 0.523 0 B TRUE 0.0967
7 psu_1 stratum_1 538 9.43 69.5 -0.123 0 C FALSE 0.0967
8 psu_1 stratum_1 538 10.7 55.8 -1.11 1 B TRUE 0.0967
9 psu_1 stratum_1 538 10.5 39.5 -0.774 1 C FALSE 0.0967
10 psu_1 stratum_1 538 10.1 39.8 0.615 0 C FALSE 0.0967
# i 90 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 2
y wt
<int> <dbl>
1 1 1
2 2 1
3 3 1
4 4 1
5 5 1
6 6 1
7 7 1
8 8 1
9 9 1
10 10 1
-- Survey Design ---------------------------------------------------------------
<survey_nonprob> (non-probability, JK1, 4 replicates) [experimental]
Sample size: 10
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
i Skipped 1 survey missing the requested variable: "only".
[ FAIL 10 | WARN 335 | SKIP 426 | PASS 11128 ]
══ Skipped tests (426) ═════════════════════════════════════════════════════════
• A-13 trigger requires careful numerical construction; tracked for follow-up
PR (1): 'test-glm-anova.R:531:3'
• A-20 requires a hand-built fit whose @design@data domain column differs from
the refit's; deferred to follow-up PR (1): 'test-glm-anova.R:481:3'
• On CRAN (422): 'test-analysis-corr-latent-primitives.R:74:1',
'test-analysis-corr-latent-primitives.R:97:1',
'test-analysis-corr-latent-primitives.R:152:1',
'test-analysis-corr-latent-primitives.R:348:1',
'test-analysis-corr-latent-primitives.R:482:1',
'test-analysis-corr-latent-primitives.R:741:1',
'test-analysis-corr-latent-variance.R:14:1',
'test-analysis-corr-latent.R:20:1', 'test-analysis-corr.R:809:1',
'test-analysis-corr.R:817:1', 'test-analysis-corr.R:1231:1',
'test-analysis-corr.R:1646:1', 'test-analysis-corr.R:1664:1',
'test-analysis-covariance.R:690:1', 'test-analysis-covariance.R:699:1',
'test-analysis-covariance.R:712:1', 'test-analysis-covariance.R:734:1',
'test-analysis-covariance.R:747:1', 'test-analysis-covariance.R:768:1',
'test-analysis-covariance.R:785:1', 'test-analysis-covariance.R:798:1',
'test-analysis-covariance.R:819:1', 'test-analysis-covariance.R:851:1',
'test-analysis-covariance.R:884:1', 'test-analysis-covariance.R:924:1',
'test-analysis-covariance.R:1131:1', 'test-analysis-covariance.R:1154:1',
'test-analysis-covariance.R:1176:1', 'test-analysis-diffs-helpers.R:147:1',
'test-analysis-diffs-helpers.R:388:1',
'test-analysis-diffs-marginaleffects.R:6:1',
'test-analysis-diffs-numerical.R:6:1', 'test-analysis-diffs.R:30:1',
'test-analysis-diffs.R:39:1', 'test-analysis-diffs.R:48:1',
'test-analysis-diffs.R:57:1', 'test-analysis-diffs.R:66:1',
'test-analysis-diffs.R:77:1', 'test-analysis-diffs.R:89:1',
'test-analysis-diffs.R:101:1', 'test-analysis-diffs.R:435:1',
'test-analysis-diffs.R:765:1', 'test-analysis-diffs.R:774:1',
'test-analysis-diffs.R:783:1', 'test-analysis-diffs.R:792:1',
'test-analysis-diffs.R:801:1', 'test-analysis-diffs.R:810:1',
'test-analysis-freqs.R:578:1', 'test-analysis-freqs.R:589:1',
'test-analysis-freqs.R:610:1', 'test-analysis-freqs.R:631:1',
'test-analysis-freqs.R:652:1', 'test-analysis-freqs.R:1255:1',
'test-analysis-freqs.R:1499:1', 'test-analysis-helpers.R:59:1',
'test-analysis-helpers.R:77:1', 'test-analysis-helpers.R:110:1',
'test-analysis-helpers.R:398:1', 'test-analysis-helpers.R:754:1',
'test-analysis-helpers.R:1113:1', 'test-analysis-helpers.R:1153:1',
'test-analysis-helpers.R:1462:1', 'test-analysis-means.R:320:1',
'test-analysis-means.R:349:1', 'test-analysis-means.R:812:1',
'test-analysis-quantiles.R:716:1', 'test-analysis-quantiles.R:724:1',
'test-analysis-quantiles.R:759:1', 'test-analysis-quantiles.R:771:1',
'test-analysis-quantiles.R:1095:1', 'test-analysis-ratios.R:578:1',
'test-analysis-ratios.R:588:1', 'test-analysis-ratios.R:598:1',
'test-analysis-ratios.R:608:1', 'test-analysis-ratios.R:1040:1',
'test-analysis-t-test-numerical.R:6:1', 'test-analysis-t-test.R:285:1',
'test-analysis-t-test.R:310:1', 'test-analysis-t-test.R:319:1',
'test-analysis-t-test.R:328:1', 'test-analysis-t-test.R:340:1',
'test-analysis-t-test.R:352:1', 'test-analysis-t-test.R:364:1',
'test-analysis-t-test.R:377:1', 'test-analysis-t-test.R:393:1',
'test-analysis-t-test.R:402:1', 'test-analysis-t-test.R:414:1',
'test-analysis-t-test.R:426:1', 'test-analysis-t-test.R:754:1',
'test-analysis-t-test.R:820:1', 'test-analysis-t-test.R:831:1',
'test-analysis-totals.R:301:1', 'test-analysis-totals.R:320:1',
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'test-analysis-variance-collection.R:169:1',
'test-analysis-variance-collection.R:182:1',
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'test-analysis-variance.R:622:1', 'test-analysis-variance.R:634:1',
'test-analysis-variance.R:646:1', 'test-analysis-variance.R:657:1',
'test-analysis-variance.R:676:1', 'test-analysis-variance.R:691:1',
'test-analysis-variance.R:705:1', 'test-calibration.R:73:1',
'test-calibration.R:84:1', 'test-calibration.R:96:1',
'test-calibration.R:108:1', 'test-calibration.R:120:1',
'test-calibration.R:132:1', 'test-calibration.R:144:1',
'test-calibration.R:156:1', 'test-calibration.R:170:1',
'test-calibration.R:182:1', 'test-calibration.R:194:1',
'test-calibration.R:207:1', 'test-calibration.R:223:1',
'test-calibration.R:238:1', 'test-calibration.R:264:1',
'test-calibration.R:737:1', 'test-calibration.R:748:1',
'test-calibration.R:762:1', 'test-calibration.R:776:1',
'test-calibration.R:788:1', 'test-calibration.R:802:1',
'test-calibration.R:840:1', 'test-calibration.R:854:1',
'test-calibration.R:866:1', 'test-calibration.R:878:1',
'test-calibration.R:893:1', 'test-calibration.R:906:1',
'test-calibration.R:919:1', 'test-calibration.R:949:1',
'test-calibration.R:974:1', 'test-calibration.R:1002:1',
'test-collection-groups.R:352:1', 'test-collection-groups.R:362:1',
'test-collection-groups.R:375:1', 'test-collection-groups.R:411:1',
'test-collection-groups.R:549:1', 'test-collection-groups.R:556:1',
'test-constructors.R:145:1', 'test-constructors.R:161:1',
'test-constructors.R:171:1', 'test-constructors.R:189:1',
'test-constructors.R:199:1', 'test-constructors.R:259:1',
'test-constructors.R:272:1', 'test-constructors.R:302:1',
'test-constructors.R:329:1', 'test-constructors.R:347:1',
'test-constructors.R:361:1', 'test-constructors.R:730:1',
'test-constructors.R:752:1', 'test-constructors.R:827:1',
'test-constructors.R:850:1', 'test-constructors.R:1145:1',
'test-constructors.R:1159:1', 'test-constructors.R:1200:1',
'test-constructors.R:1211:1', 'test-constructors.R:1227:1',
'test-constructors.R:1243:1', 'test-constructors.R:1265:1',
'test-constructors.R:1613:1', 'test-constructors.R:1624:1',
'test-constructors.R:1636:1', 'test-constructors.R:1648:1',
'test-constructors.R:1660:1', 'test-constructors.R:1672:1',
'test-constructors.R:1738:1', 'test-constructors.R:1744:1',
'test-constructors.R:1750:1', 'test-constructors.R:1756:1',
'test-constructors.R:1762:1', 'test-constructors.R:1769:1',
'test-constructors.R:1917:1', 'test-constructors.R:2079:1',
'test-constructors.R:2091:1', 'test-constructors.R:2103:1',
'test-constructors.R:2115:1', 'test-constructors.R:2137:1',
'test-constructors.R:2159:1', 'test-constructors.R:2181:1',
'test-constructors.R:2193:1', 'test-constructors.R:2216:1',
'test-constructors.R:2289:1', 'test-constructors.R:2316:1',
'test-constructors.R:2343:1', 'test-constructors.R:2497:1',
'test-constructors.R:2524:1', 'test-constructors.R:2551:1',
'test-constructors.R:2648:1', 'test-constructors.R:2686:1',
'test-constructors.R:2710:1', 'test-constructors.R:2734:1',
'test-constructors.R:2757:1', 'test-constructors.R:2781:1',
'test-constructors.R:2891:1', 'test-constructors.R:2906:1',
'test-constructors.R:2921:1', 'test-constructors.R:2940:1',
'test-constructors.R:2959:1', 'test-constructors.R:2978:1',
'test-constructors.R:3009:1', 'test-constructors.R:3021:1',
'test-constructors.R:3035:1', 'test-constructors.R:3050:1',
'test-constructors.R:3067:1', 'test-effective-n.R:212:1',
'test-effective-n.R:220:1', 'test-effective-n.R:229:1',
'test-effective-n.R:444:1', 'test-effective-n.R:452:1',
'test-effective-n.R:460:1', 'test-effective-n.R:468:1',
'test-glm-anova-dispatch.R:270:1', 'test-glm-anova-dispatch.R:274:1',
'test-glm-anova-dispatch.R:280:1', 'test-glm-anova-dispatch.R:284:1',
'test-glm-anova-dispatch.R:289:1', 'test-glm-anova-dispatch.R:295:1',
'test-glm-anova-numerical.R:18:1', 'test-glm-anova.R:353:1',
'test-glm-anova.R:361:1', 'test-glm-anova.R:374:1', 'test-glm-anova.R:398:1',
'test-glm-anova.R:412:1', 'test-glm-anova.R:426:1', 'test-glm-anova.R:436:1',
'test-glm-anova.R:694:1', 'test-glm-anova.R:700:1', 'test-glm-anova.R:709:1',
'test-glm-anova.R:811:1', 'test-glm-anova.R:822:1', 'test-glm-anova.R:833:1',
'test-glm-anova.R:859:1', 'test-glm-anova.R:871:1', 'test-glm-anova.R:919:1',
'test-glm-marginaleffects.R:9:1', 'test-glm-methods.R:52:1',
'test-glm-methods.R:109:1', 'test-glm-methods.R:115:1',
'test-glm-methods.R:205:1', 'test-glm-methods.R:289:1',
'test-glm-methods.R:299:1', 'test-glm-methods.R:312:1',
'test-glm-methods.R:325:1', 'test-glm-methods.R:392:1',
'test-glm-methods.R:424:1', 'test-glm-methods.R:449:1',
'test-glm-methods.R:474:1', 'test-glm-methods.R:526:1',
'test-glm-methods.R:548:1', 'test-glm-methods.R:575:1',
'test-glm-methods.R:584:1', 'test-glm-methods.R:611:1',
'test-glm-methods.R:660:1', 'test-glm-methods.R:675:1',
'test-glm-numerical.R:14:1', 'test-glm.R:128:1', 'test-glm.R:177:1',
'test-glm.R:186:1', 'test-glm.R:196:1', 'test-glm.R:206:1',
'test-glm.R:219:1', 'test-glm.R:229:1', 'test-glm.R:239:1',
'test-glm.R:249:1', 'test-glm.R:261:1', 'test-glm.R:273:1',
'test-glm.R:309:1', 'test-glm.R:325:1', 'test-glm.R:1007:1',
'test-glm.R:1015:1', 'test-glm.R:1288:1', 'test-metadata-infer.R:408:1',
'test-metadata-system.R:187:1', 'test-metadata-system.R:709:1',
'test-metadata-system.R:713:1', 'test-metadata-system.R:721:1',
'test-metadata-system.R:726:1', 'test-metadata-system.R:734:1',
'test-metadata-system.R:739:1', 'test-metadata-system.R:744:1',
'test-metadata-system.R:749:1', 'test-metadata-system.R:925:1',
'test-metadata-system.R:930:1', 'test-metadata-system.R:935:1',
'test-metadata-system.R:939:1', 'test-metadata-system.R:944:1',
'test-metadata-system.R:952:1', 'test-metadata-system.R:960:1',
'test-metadata-system.R:965:1', 'test-metadata-system.R:1107:1',
'test-metadata-system.R:1114:1', 'test-metadata-system.R:1119:1',
'test-metadata-system.R:1127:1', 'test-metadata-system.R:1132:1',
'test-metadata-system.R:1140:1', 'test-metadata-system.R:1145:1',
'test-metadata-system.R:1278:1', 'test-metadata-system.R:1282:1',
'test-metadata-system.R:1290:1', 'test-metadata-system.R:1295:1',
'test-metadata-system.R:1303:1', 'test-metadata-system.R:1308:1',
'test-metadata-system.R:1313:1', 'test-metadata-system.R:1439:1',
'test-metadata-system.R:1443:1', 'test-metadata-system.R:1448:1',
'test-metadata-system.R:1456:1', 'test-metadata-system.R:1461:1',
'test-metadata-system.R:1469:1', 'test-metadata-system.R:1474:1',
'test-metadata-system.R:1623:1', 'test-metadata-system.R:1628:1',
'test-metadata-system.R:1635:1', 'test-metadata-system.R:1643:1',
'test-metadata-system.R:1648:1', 'test-metadata-system.R:1660:1',
'test-metadata-system.R:1665:1', 'test-metadata-system.R:1887:1',
'test-metadata-system.R:2040:1', 'test-metadata-system.R:2054:1',
'test-metadata-system.R:2068:1', 'test-metadata-system.R:2082:1',
'test-metadata-system.R:2202:1', 'test-metadata-system.R:2438:1',
'test-metadata-system.R:2442:1', 'test-metadata-system.R:2622:1',
'test-metadata-system.R:2630:1', 'test-metadata-system.R:2648:1',
'test-metadata-system.R:2663:1', 'test-metadata-system.R:2678:1',
'test-metadata-system.R:2858:1', 'test-metadata-system.R:2866:1',
'test-metadata-system.R:2881:1', 'test-metadata-system.R:2896:1',
'test-metadata-system.R:3079:1', 'test-metadata-system.R:3087:1',
'test-metadata-system.R:3095:1', 'test-metadata-system.R:3110:1',
'test-metadata-system.R:3128:1', 'test-metadata-system.R:3146:1',
'test-metadata-system.R:3164:1', 'test-metadata-system.R:3179:1',
'test-metadata-system.R:3356:1', 'test-metadata-system.R:3364:1',
'test-metadata-system.R:3372:1', 'test-metadata-system.R:3390:1',
'test-metadata-system.R:3408:1', 'test-metadata-system.R:3426:1',
'test-metadata-system.R:3441:1', 'test-metadata-system.R:3506:1',
'test-metadata-system.R:3517:1', 'test-methods-print.R:107:1',
'test-methods-print.R:118:1', 'test-methods-print.R:224:1',
'test-methods-print.R:235:1', 'test-methods-print.R:255:1',
'test-methods-print.R:266:1', 'test-methods-print.R:286:1',
'test-methods-print.R:331:1', 'test-methods-print.R:348:1',
'test-methods-print.R:375:1', 'test-methods-print.R:386:1',
'test-methods-print.R:398:1', 'test-methods-print.R:410:1',
'test-methods-print.R:421:1', 'test-methods-print.R:432:1',
'test-methods-print.R:447:1', 'test-methods-print.R:462:1',
'test-methods-print.R:652:1', 'test-methods-print.R:680:1',
'test-methods-print.R:702:1', 'test-methods-print.R:723:1',
'test-methods-print.R:736:1', 'test-methods-print.R:749:1',
'test-methods-print.R:756:1', 'test-methods-print.R:866:1',
'test-methods-print.R:878:1', 'test-methods-print.R:891:1',
'test-methods-print.R:904:1', 'test-methods-print.R:964:1',
'test-methods-print.R:976:1', 'test-methods-print.R:989:1',
'test-methods-print.R:1002:1', 'test-nonprob-bootstrap-variance.R:585:1',
'test-sata-detection.R:178:1', 'test-sata-detection.R:193:1',
'test-sata-detection.R:211:1', 'test-survey-collection-dispatch.R:319:1',
'test-survey-collection-dispatch.R:343:1',
'test-survey-collection-dispatch.R:366:1',
'test-survey-collection-dispatch.R:379:1',
'test-survey-collection-dispatch.R:389:1',
'test-survey-collection-dispatch.R:399:1',
'test-survey-collection-dispatch.R:424:1',
'test-survey-collection-dispatch.R:446:1',
'test-survey-collection-dispatch.R:559:1',
'test-survey-collection-dispatch.R:819:1', 'test-survey-collection.R:187:1',
'test-survey-collection.R:236:1', 'test-survey-collection.R:381:1',
'test-survey-collection.R:455:1', 'test-survey-collection.R:714:1',
'test-survey-collection.R:742:1', 'test-survey-collection.R:1008:1',
'test-survey-collection.R:1014:1', 'test-survey-collection.R:1025:1',
'test-update-design.R:284:1', 'test-utils.R:640:1',
'test-validators.R:354:1', 'test-validators.R:376:1',
'test-validators.R:398:1', 'test-variance-taylor.R:308:1',
'test-variance-twophase.R:5:1', 'test-variance-vendored-saddlepoint.R:9:1'
• Set SURVEYCORE_EXTENDED_TESTS=true to run extended tests (1):
'test-srr-compliance.R:294:3'
• {MASS} is not installed (1): 'test-calibration.R:633:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-analysis-diffs-helpers.R:478:3'): .extract_me_estimates() with groups: result_groups is a data.frame ──
Expected `nrow(result$result_groups)` to equal 4L.
Differences:
`actual`: 3
`expected`: 4
── Failure ('test-analysis-diffs-helpers.R:668:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ──
Expected `nrow(out$groups_df)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Failure ('test-analysis-diffs-helpers.R:669:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ──
Expected `length(out$col_vecs[["treats"]])` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Error ('test-analysis-diffs-helpers.R:858:3'): .build_diffs_output() p-value adjustment with groups: adjusts within each group ──
Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:858:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs-helpers.R:1038:3'): .build_diffs_output() pct_change with show_means = FALSE + grouped ME + show_pct_change = TRUE: pct_change computed (not NA) ──
Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1038:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs-helpers.R:1334:3'): .build_diffs_output() grouped path with pct_change: group combo loop hits has_group branch ──
Error in `if (grp_ok) { ref_mean_val <- all_rows[[ri]]$mean break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1334:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Failure ('test-analysis-diffs.R:471:3'): get_diffs() with group produces grouped output ──
Expected `nrow(result)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Failure ('test-analysis-diffs.R:490:3'): get_diffs() with covariates and group ──
Expected `nrow(result)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Error ('test-analysis-diffs.R:562:3'): get_diffs() pval_adj with group adjusts within groups ──
Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:562:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore::get_diffs(...)
4. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs.R:1026:3'): get_diffs() pct_change is non-NA with show_means = FALSE (grouped) ──
Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:1026:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore::get_diffs(...)
4. └─surveycore:::.build_diffs_output(...)
[ FAIL 10 | WARN 335 | SKIP 426 | PASS 11128 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [3m/11m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(surveycore)
>
> test_check("surveycore")
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
# A survey_diffs result
# Design: Taylor series | Family: gaussian (identity)
# DV: y | Treatment: arm (ref: Ctrl)
# Method: coefficient / intercept
# A <survey_diffs> [2 × 4]
# A tibble: 2 x 4
arm estimate mean n
<fct> <dbl> <dbl> <int>
1 Ctrl 0 0.5 100
2 T1 0.05 0.55 100
Saving _problems/test-analysis-diffs-helpers-478.R
Saving _problems/test-analysis-diffs-helpers-668.R
Saving _problems/test-analysis-diffs-helpers-669.R
Saving _problems/test-analysis-diffs-helpers-876.R
Saving _problems/test-analysis-diffs-helpers-1056.R
Saving _problems/test-analysis-diffs-helpers-1352.R
Saving _problems/test-analysis-diffs-471.R
Saving _problems/test-analysis-diffs-490.R
Saving _problems/test-analysis-diffs-569.R
Saving _problems/test-analysis-diffs-1034.R
# A survey_t_test result
# Design: Taylor series | N: 400
# DV: outcome | By: grp2 (A vs. B)
# A <tbl_df> [1 × 13]
# A tibble: 1 x 13
level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat df
<chr> <chr> <dbl> <dbl> <dbl> <int> <int> <dbl> <dbl> <dbl> <dbl>
1 A B 3.51 50.9 54.4 209 191 1.16 5.86 3.18 15
# i 2 more variables: p_value <dbl>, stars <chr>
# A survey_pairwise result
# Design: Taylor series | N: 400
# DV: outcome | By: grp3 (3 levels, 3 pairs)
# Adjustment: holm
# A <tbl_df> [3 × 13]
# A tibble: 3 x 13
level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat
<chr> <chr> <dbl> <dbl> <dbl> <int> <int> <dbl> <dbl> <dbl>
1 X Y -0.910 53.1 52.2 145 136 -3.59 1.77 -0.725
2 X Z -0.847 53.1 52.3 145 119 -3.77 2.08 -0.617
3 Y Z 0.0631 52.2 52.3 136 119 -2.78 2.91 0.0473
# i 3 more variables: df <dbl>, p_value <dbl>, stars <chr>
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
-- Survey Design ---------------------------------------------------------------
<survey_nonprob> (non-probability) [experimental]
* Variance: SRS approximation (no bootstrap replicate weights)
Sample size: 10
# A tibble: 10 x 2
y w
<int> <dbl>
1 1 1
2 2 1
3 3 1
4 4 1
5 5 1
6 6 1
7 7 1
8 8 1
9 9 1
10 10 1
-- Survey Design Summary -------------------------------------------------------
Type: non-probability [experimental]
Sample size: 10
Weighted N: 10
-- Design --
Weights: w
* Range: 1 – 1
* Mean: 1
* CV: 0
Calibration provenance: none stored
Metadata: 0 of 2 variable(s) labeled
Survey-weighted GLM
Family: gaussian (identity link)
Formula: y1 ~ y2 + y3
Design: Taylor series
Coefficients:
(Intercept) y2 y3
51.1868 -0.0624 -2.6042
Degrees of freedom: 16 (design-based)
Survey-weighted GLM
Call:
survey_glm(design = .glm_taylor(), formula = y1 ~ y2 + y3)
Deviance Residuals:
Min 1Q Median 3Q Max
-93.3797 -18.7253 -0.4633 22.9540 75.4878
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 51.1868 0.7268 70.4262 0.0000 ***
y2 -0.0624 0.8308 -0.0752 0.9412
y3 -2.6042 1.4802 -1.7594 0.1003
---
Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
(Dispersion parameter for gaussian family taken to be 986.9)
Null deviance: 197426 on 199 degrees of freedom
Residual deviance: 194412 on 197 degrees of freedom
AIC: 1492
Design df: 16 (taylor)
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
# i 49 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 10
psu strata fpc wt y1 y2 y3 group prob ..surveycore_wt..
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl>
1 psu_1 stratum~ 378 14.3 50.9 -0.122 1 A 0.0701 14.3
2 psu_1 stratum~ 378 21.8 20.1 0.188 0 B 0.0459 21.8
3 psu_1 stratum~ 378 14.4 52.8 0.119 1 B 0.0697 14.4
4 psu_2 stratum~ 378 18.9 46.3 -0.0251 0 A 0.0530 18.9
5 psu_2 stratum~ 378 23.0 51.9 0.108 0 B 0.0435 23.0
6 psu_2 stratum~ 378 11.0 55.8 -0.485 0 C 0.0908 11.0
7 psu_2 stratum~ 378 13.8 64.0 -0.504 0 A 0.0727 13.8
8 psu_2 stratum~ 378 14.2 42.7 -1.66 0 B 0.0706 14.2
9 psu_3 stratum~ 378 16.5 63.0 -0.382 1 C 0.0606 16.5
10 psu_3 stratum~ 378 13.7 53.4 -0.513 1 A 0.0728 13.7
# i 40 more rows
# A tibble: 30 x 9
psu strata fpc wt y1 y2 y3 group ..surveycore_wt..
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <int>
1 psu_1 stratum_1 218 14.3 41.5 1.04 1 B 1
2 psu_1 stratum_1 218 21.8 25.9 0.921 1 B 1
3 psu_2 stratum_1 218 14.4 50.4 0.721 0 B 1
4 psu_2 stratum_1 218 18.9 52.1 -1.04 1 A 1
5 psu_2 stratum_1 218 23.0 46.4 -0.0902 0 A 1
6 psu_3 stratum_1 218 11.0 57.6 0.624 0 C 1
7 psu_3 stratum_1 218 13.7 42.7 -0.954 0 B 1
8 psu_4 stratum_1 218 14.2 36.3 -0.543 0 B 1
9 psu_4 stratum_1 218 16.5 54.3 0.581 0 C 1
10 psu_4 stratum_1 218 13.7 41.9 0.768 0 C 1
# i 20 more rows
# A tibble: 50 x 13
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
# i 49 more rows
# i 2 more variables: repwt_4 <dbl>, repwt_5 <dbl>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
# i 59 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 50 x 13
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8
# i 40 more rows
# i 2 more variables: repwt_4 <dbl>, repwt_5 <dbl>
# A tibble: 50 x 14
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8
# i 40 more rows
# i 3 more variables: repwt_4 <dbl>, repwt_5 <dbl>, fpc_rep <int>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687
3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687
4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687
5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687
6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687
7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687
8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687
9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687
10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687
# i 50 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687
3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687
4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687
5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687
6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687
7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687
8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687
9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687
10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687
# i 50 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 30 x 2
y w
<dbl> <dbl>
1 0.828 2.00
2 0.0757 1.11
3 0.126 1.85
4 2.27 1.22
5 -0.838 1.30
6 -0.469 1.48
7 0.0155 1.20
8 0.961 1.41
9 -0.281 0.965
10 0.0697 1.51
# i 20 more rows
# A tibble: 100 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 538 11.6 50.9 -1.43 0 C FALSE 0.0967
2 psu_1 stratum_1 538 12.0 46.7 -0.718 0 C FALSE 0.0967
3 psu_1 stratum_1 538 12.1 42.0 0.205 1 A TRUE 0.0967
4 psu_1 stratum_1 538 11.6 30.8 -1.90 0 A FALSE 0.0967
5 psu_1 stratum_1 538 9.12 53.7 -0.449 0 A FALSE 0.0967
6 psu_1 stratum_1 538 10.3 56.6 0.523 0 B TRUE 0.0967
7 psu_1 stratum_1 538 9.43 69.5 -0.123 0 C FALSE 0.0967
8 psu_1 stratum_1 538 10.7 55.8 -1.11 1 B TRUE 0.0967
9 psu_1 stratum_1 538 10.5 39.5 -0.774 1 C FALSE 0.0967
10 psu_1 stratum_1 538 10.1 39.8 0.615 0 C FALSE 0.0967
# i 90 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 2
y wt
<int> <dbl>
1 1 1
2 2 1
3 3 1
4 4 1
5 5 1
6 6 1
7 7 1
8 8 1
9 9 1
10 10 1
-- Survey Design ---------------------------------------------------------------
<survey_nonprob> (non-probability, JK1, 4 replicates) [experimental]
Sample size: 10
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
i Skipped 1 survey missing the requested variable: "only".
[ FAIL 10 | WARN 335 | SKIP 425 | PASS 11129 ]
══ Skipped tests (425) ═════════════════════════════════════════════════════════
• A-13 trigger requires careful numerical construction; tracked for follow-up
PR (1): 'test-glm-anova.R:531:3'
• A-20 requires a hand-built fit whose @design@data domain column differs from
the refit's; deferred to follow-up PR (1): 'test-glm-anova.R:481:3'
• On CRAN (422): 'test-analysis-corr-latent-primitives.R:74:1',
'test-analysis-corr-latent-primitives.R:97:1',
'test-analysis-corr-latent-primitives.R:152:1',
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'test-glm-anova.R:412:1', 'test-glm-anova.R:426:1', 'test-glm-anova.R:436:1',
'test-glm-anova.R:694:1', 'test-glm-anova.R:700:1', 'test-glm-anova.R:709:1',
'test-glm-anova.R:811:1', 'test-glm-anova.R:822:1', 'test-glm-anova.R:833:1',
'test-glm-anova.R:859:1', 'test-glm-anova.R:871:1', 'test-glm-anova.R:919:1',
'test-glm-marginaleffects.R:9:1', 'test-glm-methods.R:52:1',
'test-glm-methods.R:109:1', 'test-glm-methods.R:115:1',
'test-glm-methods.R:205:1', 'test-glm-methods.R:289:1',
'test-glm-methods.R:299:1', 'test-glm-methods.R:312:1',
'test-glm-methods.R:325:1', 'test-glm-methods.R:392:1',
'test-glm-methods.R:424:1', 'test-glm-methods.R:449:1',
'test-glm-methods.R:474:1', 'test-glm-methods.R:526:1',
'test-glm-methods.R:548:1', 'test-glm-methods.R:575:1',
'test-glm-methods.R:584:1', 'test-glm-methods.R:611:1',
'test-glm-methods.R:660:1', 'test-glm-methods.R:675:1',
'test-glm-numerical.R:14:1', 'test-glm.R:128:1', 'test-glm.R:177:1',
'test-glm.R:186:1', 'test-glm.R:196:1', 'test-glm.R:206:1',
'test-glm.R:219:1', 'test-glm.R:229:1', 'test-glm.R:239:1',
'test-glm.R:249:1', 'test-glm.R:261:1', 'test-glm.R:273:1',
'test-glm.R:309:1', 'test-glm.R:325:1', 'test-glm.R:1007:1',
'test-glm.R:1015:1', 'test-glm.R:1288:1', 'test-metadata-infer.R:408:1',
'test-metadata-system.R:187:1', 'test-metadata-system.R:709:1',
'test-metadata-system.R:713:1', 'test-metadata-system.R:721:1',
'test-metadata-system.R:726:1', 'test-metadata-system.R:734:1',
'test-metadata-system.R:739:1', 'test-metadata-system.R:744:1',
'test-metadata-system.R:749:1', 'test-metadata-system.R:925:1',
'test-metadata-system.R:930:1', 'test-metadata-system.R:935:1',
'test-metadata-system.R:939:1', 'test-metadata-system.R:944:1',
'test-metadata-system.R:952:1', 'test-metadata-system.R:960:1',
'test-metadata-system.R:965:1', 'test-metadata-system.R:1107:1',
'test-metadata-system.R:1114:1', 'test-metadata-system.R:1119:1',
'test-metadata-system.R:1127:1', 'test-metadata-system.R:1132:1',
'test-metadata-system.R:1140:1', 'test-metadata-system.R:1145:1',
'test-metadata-system.R:1278:1', 'test-metadata-system.R:1282:1',
'test-metadata-system.R:1290:1', 'test-metadata-system.R:1295:1',
'test-metadata-system.R:1303:1', 'test-metadata-system.R:1308:1',
'test-metadata-system.R:1313:1', 'test-metadata-system.R:1439:1',
'test-metadata-system.R:1443:1', 'test-metadata-system.R:1448:1',
'test-metadata-system.R:1456:1', 'test-metadata-system.R:1461:1',
'test-metadata-system.R:1469:1', 'test-metadata-system.R:1474:1',
'test-metadata-system.R:1623:1', 'test-metadata-system.R:1628:1',
'test-metadata-system.R:1635:1', 'test-metadata-system.R:1643:1',
'test-metadata-system.R:1648:1', 'test-metadata-system.R:1660:1',
'test-metadata-system.R:1665:1', 'test-metadata-system.R:1887:1',
'test-metadata-system.R:2040:1', 'test-metadata-system.R:2054:1',
'test-metadata-system.R:2068:1', 'test-metadata-system.R:2082:1',
'test-metadata-system.R:2202:1', 'test-metadata-system.R:2438:1',
'test-metadata-system.R:2442:1', 'test-metadata-system.R:2622:1',
'test-metadata-system.R:2630:1', 'test-metadata-system.R:2648:1',
'test-metadata-system.R:2663:1', 'test-metadata-system.R:2678:1',
'test-metadata-system.R:2858:1', 'test-metadata-system.R:2866:1',
'test-metadata-system.R:2881:1', 'test-metadata-system.R:2896:1',
'test-metadata-system.R:3079:1', 'test-metadata-system.R:3087:1',
'test-metadata-system.R:3095:1', 'test-metadata-system.R:3110:1',
'test-metadata-system.R:3128:1', 'test-metadata-system.R:3146:1',
'test-metadata-system.R:3164:1', 'test-metadata-system.R:3179:1',
'test-metadata-system.R:3356:1', 'test-metadata-system.R:3364:1',
'test-metadata-system.R:3372:1', 'test-metadata-system.R:3390:1',
'test-metadata-system.R:3408:1', 'test-metadata-system.R:3426:1',
'test-metadata-system.R:3441:1', 'test-metadata-system.R:3506:1',
'test-metadata-system.R:3517:1', 'test-methods-print.R:107:1',
'test-methods-print.R:118:1', 'test-methods-print.R:224:1',
'test-methods-print.R:235:1', 'test-methods-print.R:255:1',
'test-methods-print.R:266:1', 'test-methods-print.R:286:1',
'test-methods-print.R:331:1', 'test-methods-print.R:348:1',
'test-methods-print.R:375:1', 'test-methods-print.R:386:1',
'test-methods-print.R:398:1', 'test-methods-print.R:410:1',
'test-methods-print.R:421:1', 'test-methods-print.R:432:1',
'test-methods-print.R:447:1', 'test-methods-print.R:462:1',
'test-methods-print.R:652:1', 'test-methods-print.R:680:1',
'test-methods-print.R:702:1', 'test-methods-print.R:723:1',
'test-methods-print.R:736:1', 'test-methods-print.R:749:1',
'test-methods-print.R:756:1', 'test-methods-print.R:866:1',
'test-methods-print.R:878:1', 'test-methods-print.R:891:1',
'test-methods-print.R:904:1', 'test-methods-print.R:964:1',
'test-methods-print.R:976:1', 'test-methods-print.R:989:1',
'test-methods-print.R:1002:1', 'test-nonprob-bootstrap-variance.R:585:1',
'test-sata-detection.R:178:1', 'test-sata-detection.R:193:1',
'test-sata-detection.R:211:1', 'test-survey-collection-dispatch.R:319:1',
'test-survey-collection-dispatch.R:343:1',
'test-survey-collection-dispatch.R:366:1',
'test-survey-collection-dispatch.R:379:1',
'test-survey-collection-dispatch.R:389:1',
'test-survey-collection-dispatch.R:399:1',
'test-survey-collection-dispatch.R:424:1',
'test-survey-collection-dispatch.R:446:1',
'test-survey-collection-dispatch.R:559:1',
'test-survey-collection-dispatch.R:819:1', 'test-survey-collection.R:187:1',
'test-survey-collection.R:236:1', 'test-survey-collection.R:381:1',
'test-survey-collection.R:455:1', 'test-survey-collection.R:714:1',
'test-survey-collection.R:742:1', 'test-survey-collection.R:1008:1',
'test-survey-collection.R:1014:1', 'test-survey-collection.R:1025:1',
'test-update-design.R:284:1', 'test-utils.R:640:1',
'test-validators.R:354:1', 'test-validators.R:376:1',
'test-validators.R:398:1', 'test-variance-taylor.R:308:1',
'test-variance-twophase.R:5:1', 'test-variance-vendored-saddlepoint.R:9:1'
• Set SURVEYCORE_EXTENDED_TESTS=true to run extended tests (1):
'test-srr-compliance.R:294:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-analysis-diffs-helpers.R:478:3'): .extract_me_estimates() with groups: result_groups is a data.frame ──
Expected `nrow(result$result_groups)` to equal 4L.
Differences:
`actual`: 3
`expected`: 4
── Failure ('test-analysis-diffs-helpers.R:668:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ──
Expected `nrow(out$groups_df)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Failure ('test-analysis-diffs-helpers.R:669:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ──
Expected `length(out$col_vecs[["treats"]])` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Error ('test-analysis-diffs-helpers.R:858:3'): .build_diffs_output() p-value adjustment with groups: adjusts within each group ──
Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:858:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs-helpers.R:1038:3'): .build_diffs_output() pct_change with show_means = FALSE + grouped ME + show_pct_change = TRUE: pct_change computed (not NA) ──
Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1038:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs-helpers.R:1334:3'): .build_diffs_output() grouped path with pct_change: group combo loop hits has_group branch ──
Error in `if (grp_ok) { ref_mean_val <- all_rows[[ri]]$mean break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1334:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Failure ('test-analysis-diffs.R:471:3'): get_diffs() with group produces grouped output ──
Expected `nrow(result)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Failure ('test-analysis-diffs.R:490:3'): get_diffs() with covariates and group ──
Expected `nrow(result)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Error ('test-analysis-diffs.R:562:3'): get_diffs() pval_adj with group adjusts within groups ──
Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:562:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore::get_diffs(...)
4. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs.R:1026:3'): get_diffs() pct_change is non-NA with show_means = FALSE (grouped) ──
Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:1026:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore::get_diffs(...)
4. └─surveycore:::.build_diffs_output(...)
[ FAIL 10 | WARN 335 | SKIP 425 | PASS 11129 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.0.0
Check: tests
Result: ERROR
Running 'testthat.R' [252s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(surveycore)
>
> test_check("surveycore")
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
# A survey_diffs result
# Design: Taylor series | Family: gaussian (identity)
# DV: y | Treatment: arm (ref: Ctrl)
# Method: coefficient / intercept
# A <survey_diffs> [2 × 4]
# A tibble: 2 x 4
arm estimate mean n
<fct> <dbl> <dbl> <int>
1 Ctrl 0 0.5 100
2 T1 0.05 0.55 100
Saving _problems/test-analysis-diffs-helpers-478.R
Saving _problems/test-analysis-diffs-helpers-668.R
Saving _problems/test-analysis-diffs-helpers-669.R
Saving _problems/test-analysis-diffs-helpers-876.R
Saving _problems/test-analysis-diffs-helpers-1056.R
Saving _problems/test-analysis-diffs-helpers-1352.R
Saving _problems/test-analysis-diffs-471.R
Saving _problems/test-analysis-diffs-490.R
Saving _problems/test-analysis-diffs-569.R
Saving _problems/test-analysis-diffs-1034.R
# A survey_t_test result
# Design: Taylor series | N: 400
# DV: outcome | By: grp2 (A vs. B)
# A <tbl_df> [1 × 13]
# A tibble: 1 x 13
level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat df
<chr> <chr> <dbl> <dbl> <dbl> <int> <int> <dbl> <dbl> <dbl> <dbl>
1 A B 3.51 50.9 54.4 209 191 1.16 5.86 3.18 15
# i 2 more variables: p_value <dbl>, stars <chr>
# A survey_pairwise result
# Design: Taylor series | N: 400
# DV: outcome | By: grp3 (3 levels, 3 pairs)
# Adjustment: holm
# A <tbl_df> [3 × 13]
# A tibble: 3 x 13
level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat
<chr> <chr> <dbl> <dbl> <dbl> <int> <int> <dbl> <dbl> <dbl>
1 X Y -0.910 53.1 52.2 145 136 -3.59 1.77 -0.725
2 X Z -0.847 53.1 52.3 145 119 -3.77 2.08 -0.617
3 Y Z 0.0631 52.2 52.3 136 119 -2.78 2.91 0.0473
# i 3 more variables: df <dbl>, p_value <dbl>, stars <chr>
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
-- Survey Design ---------------------------------------------------------------
<survey_nonprob> (non-probability) [experimental]
* Variance: SRS approximation (no bootstrap replicate weights)
Sample size: 10
# A tibble: 10 x 2
y w
<int> <dbl>
1 1 1
2 2 1
3 3 1
4 4 1
5 5 1
6 6 1
7 7 1
8 8 1
9 9 1
10 10 1
-- Survey Design Summary -------------------------------------------------------
Type: non-probability [experimental]
Sample size: 10
Weighted N: 10
-- Design --
Weights: w
* Range: 1 – 1
* Mean: 1
* CV: 0
Calibration provenance: none stored
Metadata: 0 of 2 variable(s) labeled
Survey-weighted GLM
Family: gaussian (identity link)
Formula: y1 ~ y2 + y3
Design: Taylor series
Coefficients:
(Intercept) y2 y3
51.1868 -0.0624 -2.6042
Degrees of freedom: 16 (design-based)
Survey-weighted GLM
Call:
survey_glm(design = .glm_taylor(), formula = y1 ~ y2 + y3)
Deviance Residuals:
Min 1Q Median 3Q Max
-93.3797 -18.7253 -0.4633 22.9540 75.4878
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 51.1868 0.7268 70.4262 0.0000 ***
y2 -0.0624 0.8308 -0.0752 0.9412
y3 -2.6042 1.4802 -1.7594 0.1003
---
Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
(Dispersion parameter for gaussian family taken to be 986.9)
Null deviance: 197426 on 199 degrees of freedom
Residual deviance: 194412 on 197 degrees of freedom
AIC: 1492
Design df: 16 (taylor)
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
# i 49 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 10
psu strata fpc wt y1 y2 y3 group prob ..surveycore_wt..
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl>
1 psu_1 stratum~ 378 14.3 50.9 -0.122 1 A 0.0701 14.3
2 psu_1 stratum~ 378 21.8 20.1 0.188 0 B 0.0459 21.8
3 psu_1 stratum~ 378 14.4 52.8 0.119 1 B 0.0697 14.4
4 psu_2 stratum~ 378 18.9 46.3 -0.0251 0 A 0.0530 18.9
5 psu_2 stratum~ 378 23.0 51.9 0.108 0 B 0.0435 23.0
6 psu_2 stratum~ 378 11.0 55.8 -0.485 0 C 0.0908 11.0
7 psu_2 stratum~ 378 13.8 64.0 -0.504 0 A 0.0727 13.8
8 psu_2 stratum~ 378 14.2 42.7 -1.66 0 B 0.0706 14.2
9 psu_3 stratum~ 378 16.5 63.0 -0.382 1 C 0.0606 16.5
10 psu_3 stratum~ 378 13.7 53.4 -0.513 1 A 0.0728 13.7
# i 40 more rows
# A tibble: 30 x 9
psu strata fpc wt y1 y2 y3 group ..surveycore_wt..
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <int>
1 psu_1 stratum_1 218 14.3 41.5 1.04 1 B 1
2 psu_1 stratum_1 218 21.8 25.9 0.921 1 B 1
3 psu_2 stratum_1 218 14.4 50.4 0.721 0 B 1
4 psu_2 stratum_1 218 18.9 52.1 -1.04 1 A 1
5 psu_2 stratum_1 218 23.0 46.4 -0.0902 0 A 1
6 psu_3 stratum_1 218 11.0 57.6 0.624 0 C 1
7 psu_3 stratum_1 218 13.7 42.7 -0.954 0 B 1
8 psu_4 stratum_1 218 14.2 36.3 -0.543 0 B 1
9 psu_4 stratum_1 218 16.5 54.3 0.581 0 C 1
10 psu_4 stratum_1 218 13.7 41.9 0.768 0 C 1
# i 20 more rows
# A tibble: 50 x 13
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
# i 49 more rows
# i 2 more variables: repwt_4 <dbl>, repwt_5 <dbl>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
# i 59 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 50 x 13
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8
# i 40 more rows
# i 2 more variables: repwt_4 <dbl>, repwt_5 <dbl>
# A tibble: 50 x 14
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8
# i 40 more rows
# i 3 more variables: repwt_4 <dbl>, repwt_5 <dbl>, fpc_rep <int>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687
3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687
4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687
5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687
6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687
7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687
8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687
9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687
10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687
# i 50 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687
3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687
4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687
5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687
6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687
7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687
8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687
9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687
10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687
# i 50 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 30 x 2
y w
<dbl> <dbl>
1 0.828 2.00
2 0.0757 1.11
3 0.126 1.85
4 2.27 1.22
5 -0.838 1.30
6 -0.469 1.48
7 0.0155 1.20
8 0.961 1.41
9 -0.281 0.965
10 0.0697 1.51
# i 20 more rows
# A tibble: 100 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 538 11.6 50.9 -1.43 0 C FALSE 0.0967
2 psu_1 stratum_1 538 12.0 46.7 -0.718 0 C FALSE 0.0967
3 psu_1 stratum_1 538 12.1 42.0 0.205 1 A TRUE 0.0967
4 psu_1 stratum_1 538 11.6 30.8 -1.90 0 A FALSE 0.0967
5 psu_1 stratum_1 538 9.12 53.7 -0.449 0 A FALSE 0.0967
6 psu_1 stratum_1 538 10.3 56.6 0.523 0 B TRUE 0.0967
7 psu_1 stratum_1 538 9.43 69.5 -0.123 0 C FALSE 0.0967
8 psu_1 stratum_1 538 10.7 55.8 -1.11 1 B TRUE 0.0967
9 psu_1 stratum_1 538 10.5 39.5 -0.774 1 C FALSE 0.0967
10 psu_1 stratum_1 538 10.1 39.8 0.615 0 C FALSE 0.0967
# i 90 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 2
y wt
<int> <dbl>
1 1 1
2 2 1
3 3 1
4 4 1
5 5 1
6 6 1
7 7 1
8 8 1
9 9 1
10 10 1
-- Survey Design ---------------------------------------------------------------
<survey_nonprob> (non-probability, JK1, 4 replicates) [experimental]
Sample size: 10
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
i Skipped 1 survey missing the requested variable: "only".
[ FAIL 10 | WARN 335 | SKIP 426 | PASS 11128 ]
══ Skipped tests (426) ═════════════════════════════════════════════════════════
• A-13 trigger requires careful numerical construction; tracked for follow-up
PR (1): 'test-glm-anova.R:531:3'
• A-20 requires a hand-built fit whose @design@data domain column differs from
the refit's; deferred to follow-up PR (1): 'test-glm-anova.R:481:3'
• On CRAN (422): 'test-analysis-corr-latent-primitives.R:74:1',
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'test-metadata-system.R:1313:1', 'test-metadata-system.R:1439:1',
'test-metadata-system.R:1443:1', 'test-metadata-system.R:1448:1',
'test-metadata-system.R:1456:1', 'test-metadata-system.R:1461:1',
'test-metadata-system.R:1469:1', 'test-metadata-system.R:1474:1',
'test-metadata-system.R:1623:1', 'test-metadata-system.R:1628:1',
'test-metadata-system.R:1635:1', 'test-metadata-system.R:1643:1',
'test-metadata-system.R:1648:1', 'test-metadata-system.R:1660:1',
'test-metadata-system.R:1665:1', 'test-metadata-system.R:1887:1',
'test-metadata-system.R:2040:1', 'test-metadata-system.R:2054:1',
'test-metadata-system.R:2068:1', 'test-metadata-system.R:2082:1',
'test-metadata-system.R:2202:1', 'test-metadata-system.R:2438:1',
'test-metadata-system.R:2442:1', 'test-metadata-system.R:2622:1',
'test-metadata-system.R:2630:1', 'test-metadata-system.R:2648:1',
'test-metadata-system.R:2663:1', 'test-metadata-system.R:2678:1',
'test-metadata-system.R:2858:1', 'test-metadata-system.R:2866:1',
'test-metadata-system.R:2881:1', 'test-metadata-system.R:2896:1',
'test-metadata-system.R:3079:1', 'test-metadata-system.R:3087:1',
'test-metadata-system.R:3095:1', 'test-metadata-system.R:3110:1',
'test-metadata-system.R:3128:1', 'test-metadata-system.R:3146:1',
'test-metadata-system.R:3164:1', 'test-metadata-system.R:3179:1',
'test-metadata-system.R:3356:1', 'test-metadata-system.R:3364:1',
'test-metadata-system.R:3372:1', 'test-metadata-system.R:3390:1',
'test-metadata-system.R:3408:1', 'test-metadata-system.R:3426:1',
'test-metadata-system.R:3441:1', 'test-metadata-system.R:3506:1',
'test-metadata-system.R:3517:1', 'test-methods-print.R:107:1',
'test-methods-print.R:118:1', 'test-methods-print.R:224:1',
'test-methods-print.R:235:1', 'test-methods-print.R:255:1',
'test-methods-print.R:266:1', 'test-methods-print.R:286:1',
'test-methods-print.R:331:1', 'test-methods-print.R:348:1',
'test-methods-print.R:375:1', 'test-methods-print.R:386:1',
'test-methods-print.R:398:1', 'test-methods-print.R:410:1',
'test-methods-print.R:421:1', 'test-methods-print.R:432:1',
'test-methods-print.R:447:1', 'test-methods-print.R:462:1',
'test-methods-print.R:652:1', 'test-methods-print.R:680:1',
'test-methods-print.R:702:1', 'test-methods-print.R:723:1',
'test-methods-print.R:736:1', 'test-methods-print.R:749:1',
'test-methods-print.R:756:1', 'test-methods-print.R:866:1',
'test-methods-print.R:878:1', 'test-methods-print.R:891:1',
'test-methods-print.R:904:1', 'test-methods-print.R:964:1',
'test-methods-print.R:976:1', 'test-methods-print.R:989:1',
'test-methods-print.R:1002:1', 'test-nonprob-bootstrap-variance.R:585:1',
'test-sata-detection.R:178:1', 'test-sata-detection.R:193:1',
'test-sata-detection.R:211:1', 'test-survey-collection-dispatch.R:319:1',
'test-survey-collection-dispatch.R:343:1',
'test-survey-collection-dispatch.R:366:1',
'test-survey-collection-dispatch.R:379:1',
'test-survey-collection-dispatch.R:389:1',
'test-survey-collection-dispatch.R:399:1',
'test-survey-collection-dispatch.R:424:1',
'test-survey-collection-dispatch.R:446:1',
'test-survey-collection-dispatch.R:559:1',
'test-survey-collection-dispatch.R:819:1', 'test-survey-collection.R:187:1',
'test-survey-collection.R:236:1', 'test-survey-collection.R:381:1',
'test-survey-collection.R:455:1', 'test-survey-collection.R:714:1',
'test-survey-collection.R:742:1', 'test-survey-collection.R:1008:1',
'test-survey-collection.R:1014:1', 'test-survey-collection.R:1025:1',
'test-update-design.R:284:1', 'test-utils.R:640:1',
'test-validators.R:354:1', 'test-validators.R:376:1',
'test-validators.R:398:1', 'test-variance-taylor.R:308:1',
'test-variance-twophase.R:5:1', 'test-variance-vendored-saddlepoint.R:9:1'
• Set SURVEYCORE_EXTENDED_TESTS=true to run extended tests (1):
'test-srr-compliance.R:294:3'
• {MASS} is not installed (1): 'test-calibration.R:633:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-analysis-diffs-helpers.R:478:3'): .extract_me_estimates() with groups: result_groups is a data.frame ──
Expected `nrow(result$result_groups)` to equal 4L.
Differences:
`actual`: 3
`expected`: 4
── Failure ('test-analysis-diffs-helpers.R:668:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ──
Expected `nrow(out$groups_df)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Failure ('test-analysis-diffs-helpers.R:669:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ──
Expected `length(out$col_vecs[["treats"]])` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Error ('test-analysis-diffs-helpers.R:858:3'): .build_diffs_output() p-value adjustment with groups: adjusts within each group ──
Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:858:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs-helpers.R:1038:3'): .build_diffs_output() pct_change with show_means = FALSE + grouped ME + show_pct_change = TRUE: pct_change computed (not NA) ──
Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1038:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs-helpers.R:1334:3'): .build_diffs_output() grouped path with pct_change: group combo loop hits has_group branch ──
Error in `if (grp_ok) { ref_mean_val <- all_rows[[ri]]$mean break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1334:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Failure ('test-analysis-diffs.R:471:3'): get_diffs() with group produces grouped output ──
Expected `nrow(result)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Failure ('test-analysis-diffs.R:490:3'): get_diffs() with covariates and group ──
Expected `nrow(result)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Error ('test-analysis-diffs.R:562:3'): get_diffs() pval_adj with group adjusts within groups ──
Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:562:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore::get_diffs(...)
4. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs.R:1026:3'): get_diffs() pct_change is non-NA with show_means = FALSE (grouped) ──
Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:1026:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore::get_diffs(...)
4. └─surveycore:::.build_diffs_output(...)
[ FAIL 10 | WARN 335 | SKIP 426 | PASS 11128 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-windows-x86_64
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [262s/357s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(surveycore)
>
> test_check("surveycore")
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
# A survey_diffs result
# Design: Taylor series | Family: gaussian (identity)
# DV: y | Treatment: arm (ref: Ctrl)
# Method: coefficient / intercept
# A <survey_diffs> [2 × 4]
# A tibble: 2 x 4
arm estimate mean n
<fct> <dbl> <dbl> <int>
1 Ctrl 0 0.5 100
2 T1 0.05 0.55 100
Saving _problems/test-analysis-diffs-helpers-478.R
Saving _problems/test-analysis-diffs-helpers-668.R
Saving _problems/test-analysis-diffs-helpers-669.R
Saving _problems/test-analysis-diffs-helpers-876.R
Saving _problems/test-analysis-diffs-helpers-1056.R
Saving _problems/test-analysis-diffs-helpers-1352.R
Saving _problems/test-analysis-diffs-471.R
Saving _problems/test-analysis-diffs-490.R
Saving _problems/test-analysis-diffs-569.R
Saving _problems/test-analysis-diffs-1034.R
# A survey_t_test result
# Design: Taylor series | N: 400
# DV: outcome | By: grp2 (A vs. B)
# A <tbl_df> [1 × 13]
# A tibble: 1 x 13
level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat df
<chr> <chr> <dbl> <dbl> <dbl> <int> <int> <dbl> <dbl> <dbl> <dbl>
1 A B 3.51 50.9 54.4 209 191 1.16 5.86 3.18 15
# i 2 more variables: p_value <dbl>, stars <chr>
# A survey_pairwise result
# Design: Taylor series | N: 400
# DV: outcome | By: grp3 (3 levels, 3 pairs)
# Adjustment: holm
# A <tbl_df> [3 × 13]
# A tibble: 3 x 13
level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat
<chr> <chr> <dbl> <dbl> <dbl> <int> <int> <dbl> <dbl> <dbl>
1 X Y -0.910 53.1 52.2 145 136 -3.59 1.77 -0.725
2 X Z -0.847 53.1 52.3 145 119 -3.77 2.08 -0.617
3 Y Z 0.0631 52.2 52.3 136 119 -2.78 2.91 0.0473
# i 3 more variables: df <dbl>, p_value <dbl>, stars <chr>
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
-- Survey Design ---------------------------------------------------------------
<survey_nonprob> (non-probability) [experimental]
* Variance: SRS approximation (no bootstrap replicate weights)
Sample size: 10
# A tibble: 10 x 2
y w
<int> <dbl>
1 1 1
2 2 1
3 3 1
4 4 1
5 5 1
6 6 1
7 7 1
8 8 1
9 9 1
10 10 1
-- Survey Design Summary -------------------------------------------------------
Type: non-probability [experimental]
Sample size: 10
Weighted N: 10
-- Design --
Weights: w
* Range: 1 – 1
* Mean: 1
* CV: 0
Calibration provenance: none stored
Metadata: 0 of 2 variable(s) labeled
Survey-weighted GLM
Family: gaussian (identity link)
Formula: y1 ~ y2 + y3
Design: Taylor series
Coefficients:
(Intercept) y2 y3
51.1868 -0.0624 -2.6042
Degrees of freedom: 16 (design-based)
Survey-weighted GLM
Call:
survey_glm(design = .glm_taylor(), formula = y1 ~ y2 + y3)
Deviance Residuals:
Min 1Q Median 3Q Max
-93.3797 -18.7253 -0.4633 22.9540 75.4878
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 51.1868 0.7268 70.4262 0.0000 ***
y2 -0.0624 0.8308 -0.0752 0.9412
y3 -2.6042 1.4802 -1.7594 0.1003
---
Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
(Dispersion parameter for gaussian family taken to be 986.9)
Null deviance: 197426 on 199 degrees of freedom
Residual deviance: 194412 on 197 degrees of freedom
AIC: 1492
Design df: 16 (taylor)
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
# i 49 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 10
psu strata fpc wt y1 y2 y3 group prob ..surveycore_wt..
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl>
1 psu_1 stratum~ 378 14.3 50.9 -0.122 1 A 0.0701 14.3
2 psu_1 stratum~ 378 21.8 20.1 0.188 0 B 0.0459 21.8
3 psu_1 stratum~ 378 14.4 52.8 0.119 1 B 0.0697 14.4
4 psu_2 stratum~ 378 18.9 46.3 -0.0251 0 A 0.0530 18.9
5 psu_2 stratum~ 378 23.0 51.9 0.108 0 B 0.0435 23.0
6 psu_2 stratum~ 378 11.0 55.8 -0.485 0 C 0.0908 11.0
7 psu_2 stratum~ 378 13.8 64.0 -0.504 0 A 0.0727 13.8
8 psu_2 stratum~ 378 14.2 42.7 -1.66 0 B 0.0706 14.2
9 psu_3 stratum~ 378 16.5 63.0 -0.382 1 C 0.0606 16.5
10 psu_3 stratum~ 378 13.7 53.4 -0.513 1 A 0.0728 13.7
# i 40 more rows
# A tibble: 30 x 9
psu strata fpc wt y1 y2 y3 group ..surveycore_wt..
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <int>
1 psu_1 stratum_1 218 14.3 41.5 1.04 1 B 1
2 psu_1 stratum_1 218 21.8 25.9 0.921 1 B 1
3 psu_2 stratum_1 218 14.4 50.4 0.721 0 B 1
4 psu_2 stratum_1 218 18.9 52.1 -1.04 1 A 1
5 psu_2 stratum_1 218 23.0 46.4 -0.0902 0 A 1
6 psu_3 stratum_1 218 11.0 57.6 0.624 0 C 1
7 psu_3 stratum_1 218 13.7 42.7 -0.954 0 B 1
8 psu_4 stratum_1 218 14.2 36.3 -0.543 0 B 1
9 psu_4 stratum_1 218 16.5 54.3 0.581 0 C 1
10 psu_4 stratum_1 218 13.7 41.9 0.768 0 C 1
# i 20 more rows
# A tibble: 50 x 13
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
# i 49 more rows
# i 2 more variables: repwt_4 <dbl>, repwt_5 <dbl>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
# i 59 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 50 x 13
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8
# i 40 more rows
# i 2 more variables: repwt_4 <dbl>, repwt_5 <dbl>
# A tibble: 50 x 14
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8
# i 40 more rows
# i 3 more variables: repwt_4 <dbl>, repwt_5 <dbl>, fpc_rep <int>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687
3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687
4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687
5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687
6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687
7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687
8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687
9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687
10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687
# i 50 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687
3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687
4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687
5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687
6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687
7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687
8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687
9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687
10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687
# i 50 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 30 x 2
y w
<dbl> <dbl>
1 0.828 2.00
2 0.0757 1.11
3 0.126 1.85
4 2.27 1.22
5 -0.838 1.30
6 -0.469 1.48
7 0.0155 1.20
8 0.961 1.41
9 -0.281 0.965
10 0.0697 1.51
# i 20 more rows
# A tibble: 100 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 538 11.6 50.9 -1.43 0 C FALSE 0.0967
2 psu_1 stratum_1 538 12.0 46.7 -0.718 0 C FALSE 0.0967
3 psu_1 stratum_1 538 12.1 42.0 0.205 1 A TRUE 0.0967
4 psu_1 stratum_1 538 11.6 30.8 -1.90 0 A FALSE 0.0967
5 psu_1 stratum_1 538 9.12 53.7 -0.449 0 A FALSE 0.0967
6 psu_1 stratum_1 538 10.3 56.6 0.523 0 B TRUE 0.0967
7 psu_1 stratum_1 538 9.43 69.5 -0.123 0 C FALSE 0.0967
8 psu_1 stratum_1 538 10.7 55.8 -1.11 1 B TRUE 0.0967
9 psu_1 stratum_1 538 10.5 39.5 -0.774 1 C FALSE 0.0967
10 psu_1 stratum_1 538 10.1 39.8 0.615 0 C FALSE 0.0967
# i 90 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 2
y wt
<int> <dbl>
1 1 1
2 2 1
3 3 1
4 4 1
5 5 1
6 6 1
7 7 1
8 8 1
9 9 1
10 10 1
-- Survey Design ---------------------------------------------------------------
<survey_nonprob> (non-probability, JK1, 4 replicates) [experimental]
Sample size: 10
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
i Skipped 1 survey missing the requested variable: "only".
[ FAIL 10 | WARN 335 | SKIP 426 | PASS 11128 ]
══ Skipped tests (426) ═════════════════════════════════════════════════════════
• A-13 trigger requires careful numerical construction; tracked for follow-up
PR (1): 'test-glm-anova.R:531:3'
• A-20 requires a hand-built fit whose @design@data domain column differs from
the refit's; deferred to follow-up PR (1): 'test-glm-anova.R:481:3'
• On CRAN (422): 'test-analysis-corr-latent-primitives.R:74:1',
'test-analysis-corr-latent-primitives.R:97:1',
'test-analysis-corr-latent-primitives.R:152:1',
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'test-methods-print.R:904:1', 'test-methods-print.R:964:1',
'test-methods-print.R:976:1', 'test-methods-print.R:989:1',
'test-methods-print.R:1002:1', 'test-nonprob-bootstrap-variance.R:585:1',
'test-sata-detection.R:178:1', 'test-sata-detection.R:193:1',
'test-sata-detection.R:211:1', 'test-survey-collection-dispatch.R:319:1',
'test-survey-collection-dispatch.R:343:1',
'test-survey-collection-dispatch.R:366:1',
'test-survey-collection-dispatch.R:379:1',
'test-survey-collection-dispatch.R:389:1',
'test-survey-collection-dispatch.R:399:1',
'test-survey-collection-dispatch.R:424:1',
'test-survey-collection-dispatch.R:446:1',
'test-survey-collection-dispatch.R:559:1',
'test-survey-collection-dispatch.R:819:1', 'test-survey-collection.R:187:1',
'test-survey-collection.R:236:1', 'test-survey-collection.R:381:1',
'test-survey-collection.R:455:1', 'test-survey-collection.R:714:1',
'test-survey-collection.R:742:1', 'test-survey-collection.R:1008:1',
'test-survey-collection.R:1014:1', 'test-survey-collection.R:1025:1',
'test-update-design.R:284:1', 'test-utils.R:640:1',
'test-validators.R:354:1', 'test-validators.R:376:1',
'test-validators.R:398:1', 'test-variance-taylor.R:308:1',
'test-variance-twophase.R:5:1', 'test-variance-vendored-saddlepoint.R:9:1'
• Set SURVEYCORE_EXTENDED_TESTS=true to run extended tests (1):
'test-srr-compliance.R:294:3'
• {MASS} is not installed (1): 'test-calibration.R:633:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-analysis-diffs-helpers.R:478:3'): .extract_me_estimates() with groups: result_groups is a data.frame ──
Expected `nrow(result$result_groups)` to equal 4L.
Differences:
`actual`: 3
`expected`: 4
── Failure ('test-analysis-diffs-helpers.R:668:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ──
Expected `nrow(out$groups_df)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Failure ('test-analysis-diffs-helpers.R:669:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ──
Expected `length(out$col_vecs[["treats"]])` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Error ('test-analysis-diffs-helpers.R:858:3'): .build_diffs_output() p-value adjustment with groups: adjusts within each group ──
Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:858:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs-helpers.R:1038:3'): .build_diffs_output() pct_change with show_means = FALSE + grouped ME + show_pct_change = TRUE: pct_change computed (not NA) ──
Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1038:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs-helpers.R:1334:3'): .build_diffs_output() grouped path with pct_change: group combo loop hits has_group branch ──
Error in `if (grp_ok) { ref_mean_val <- all_rows[[ri]]$mean break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1334:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Failure ('test-analysis-diffs.R:471:3'): get_diffs() with group produces grouped output ──
Expected `nrow(result)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Failure ('test-analysis-diffs.R:490:3'): get_diffs() with covariates and group ──
Expected `nrow(result)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Error ('test-analysis-diffs.R:562:3'): get_diffs() pval_adj with group adjusts within groups ──
Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:562:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore::get_diffs(...)
4. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs.R:1026:3'): get_diffs() pct_change is non-NA with show_means = FALSE (grouped) ──
Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:1026:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore::get_diffs(...)
4. └─surveycore:::.build_diffs_output(...)
[ FAIL 10 | WARN 335 | SKIP 426 | PASS 11128 ]
Error:
! Test failures.
Execution halted
Flavor: r-patched-linux-x86_64
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [262s/310s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(surveycore)
>
> test_check("surveycore")
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
# A survey_diffs result
# Design: Taylor series | Family: gaussian (identity)
# DV: y | Treatment: arm (ref: Ctrl)
# Method: coefficient / intercept
# A <survey_diffs> [2 × 4]
# A tibble: 2 x 4
arm estimate mean n
<fct> <dbl> <dbl> <int>
1 Ctrl 0 0.5 100
2 T1 0.05 0.55 100
Saving _problems/test-analysis-diffs-helpers-478.R
Saving _problems/test-analysis-diffs-helpers-668.R
Saving _problems/test-analysis-diffs-helpers-669.R
Saving _problems/test-analysis-diffs-helpers-876.R
Saving _problems/test-analysis-diffs-helpers-1056.R
Saving _problems/test-analysis-diffs-helpers-1352.R
Saving _problems/test-analysis-diffs-471.R
Saving _problems/test-analysis-diffs-490.R
Saving _problems/test-analysis-diffs-569.R
Saving _problems/test-analysis-diffs-1034.R
# A survey_t_test result
# Design: Taylor series | N: 400
# DV: outcome | By: grp2 (A vs. B)
# A <tbl_df> [1 × 13]
# A tibble: 1 x 13
level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat df
<chr> <chr> <dbl> <dbl> <dbl> <int> <int> <dbl> <dbl> <dbl> <dbl>
1 A B 3.51 50.9 54.4 209 191 1.16 5.86 3.18 15
# i 2 more variables: p_value <dbl>, stars <chr>
# A survey_pairwise result
# Design: Taylor series | N: 400
# DV: outcome | By: grp3 (3 levels, 3 pairs)
# Adjustment: holm
# A <tbl_df> [3 × 13]
# A tibble: 3 x 13
level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat
<chr> <chr> <dbl> <dbl> <dbl> <int> <int> <dbl> <dbl> <dbl>
1 X Y -0.910 53.1 52.2 145 136 -3.59 1.77 -0.725
2 X Z -0.847 53.1 52.3 145 119 -3.77 2.08 -0.617
3 Y Z 0.0631 52.2 52.3 136 119 -2.78 2.91 0.0473
# i 3 more variables: df <dbl>, p_value <dbl>, stars <chr>
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
-- Survey Design ---------------------------------------------------------------
<survey_nonprob> (non-probability) [experimental]
* Variance: SRS approximation (no bootstrap replicate weights)
Sample size: 10
# A tibble: 10 x 2
y w
<int> <dbl>
1 1 1
2 2 1
3 3 1
4 4 1
5 5 1
6 6 1
7 7 1
8 8 1
9 9 1
10 10 1
-- Survey Design Summary -------------------------------------------------------
Type: non-probability [experimental]
Sample size: 10
Weighted N: 10
-- Design --
Weights: w
* Range: 1 – 1
* Mean: 1
* CV: 0
Calibration provenance: none stored
Metadata: 0 of 2 variable(s) labeled
Survey-weighted GLM
Family: gaussian (identity link)
Formula: y1 ~ y2 + y3
Design: Taylor series
Coefficients:
(Intercept) y2 y3
51.1868 -0.0624 -2.6042
Degrees of freedom: 16 (design-based)
Survey-weighted GLM
Call:
survey_glm(design = .glm_taylor(), formula = y1 ~ y2 + y3)
Deviance Residuals:
Min 1Q Median 3Q Max
-93.3797 -18.7253 -0.4633 22.9540 75.4878
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 51.1868 0.7268 70.4262 0.0000 ***
y2 -0.0624 0.8308 -0.0752 0.9412
y3 -2.6042 1.4802 -1.7594 0.1003
---
Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
(Dispersion parameter for gaussian family taken to be 986.9)
Null deviance: 197426 on 199 degrees of freedom
Residual deviance: 194412 on 197 degrees of freedom
AIC: 1492
Design df: 16 (taylor)
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
# i 49 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 10
psu strata fpc wt y1 y2 y3 group prob ..surveycore_wt..
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl>
1 psu_1 stratum~ 378 14.3 50.9 -0.122 1 A 0.0701 14.3
2 psu_1 stratum~ 378 21.8 20.1 0.188 0 B 0.0459 21.8
3 psu_1 stratum~ 378 14.4 52.8 0.119 1 B 0.0697 14.4
4 psu_2 stratum~ 378 18.9 46.3 -0.0251 0 A 0.0530 18.9
5 psu_2 stratum~ 378 23.0 51.9 0.108 0 B 0.0435 23.0
6 psu_2 stratum~ 378 11.0 55.8 -0.485 0 C 0.0908 11.0
7 psu_2 stratum~ 378 13.8 64.0 -0.504 0 A 0.0727 13.8
8 psu_2 stratum~ 378 14.2 42.7 -1.66 0 B 0.0706 14.2
9 psu_3 stratum~ 378 16.5 63.0 -0.382 1 C 0.0606 16.5
10 psu_3 stratum~ 378 13.7 53.4 -0.513 1 A 0.0728 13.7
# i 40 more rows
# A tibble: 30 x 9
psu strata fpc wt y1 y2 y3 group ..surveycore_wt..
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <int>
1 psu_1 stratum_1 218 14.3 41.5 1.04 1 B 1
2 psu_1 stratum_1 218 21.8 25.9 0.921 1 B 1
3 psu_2 stratum_1 218 14.4 50.4 0.721 0 B 1
4 psu_2 stratum_1 218 18.9 52.1 -1.04 1 A 1
5 psu_2 stratum_1 218 23.0 46.4 -0.0902 0 A 1
6 psu_3 stratum_1 218 11.0 57.6 0.624 0 C 1
7 psu_3 stratum_1 218 13.7 42.7 -0.954 0 B 1
8 psu_4 stratum_1 218 14.2 36.3 -0.543 0 B 1
9 psu_4 stratum_1 218 16.5 54.3 0.581 0 C 1
10 psu_4 stratum_1 218 13.7 41.9 0.768 0 C 1
# i 20 more rows
# A tibble: 50 x 13
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
# i 49 more rows
# i 2 more variables: repwt_4 <dbl>, repwt_5 <dbl>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
# i 59 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 50 x 13
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8
# i 40 more rows
# i 2 more variables: repwt_4 <dbl>, repwt_5 <dbl>
# A tibble: 50 x 14
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8
# i 40 more rows
# i 3 more variables: repwt_4 <dbl>, repwt_5 <dbl>, fpc_rep <int>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687
3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687
4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687
5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687
6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687
7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687
8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687
9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687
10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687
# i 50 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687
3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687
4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687
5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687
6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687
7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687
8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687
9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687
10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687
# i 50 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 30 x 2
y w
<dbl> <dbl>
1 0.828 2.00
2 0.0757 1.11
3 0.126 1.85
4 2.27 1.22
5 -0.838 1.30
6 -0.469 1.48
7 0.0155 1.20
8 0.961 1.41
9 -0.281 0.965
10 0.0697 1.51
# i 20 more rows
# A tibble: 100 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 538 11.6 50.9 -1.43 0 C FALSE 0.0967
2 psu_1 stratum_1 538 12.0 46.7 -0.718 0 C FALSE 0.0967
3 psu_1 stratum_1 538 12.1 42.0 0.205 1 A TRUE 0.0967
4 psu_1 stratum_1 538 11.6 30.8 -1.90 0 A FALSE 0.0967
5 psu_1 stratum_1 538 9.12 53.7 -0.449 0 A FALSE 0.0967
6 psu_1 stratum_1 538 10.3 56.6 0.523 0 B TRUE 0.0967
7 psu_1 stratum_1 538 9.43 69.5 -0.123 0 C FALSE 0.0967
8 psu_1 stratum_1 538 10.7 55.8 -1.11 1 B TRUE 0.0967
9 psu_1 stratum_1 538 10.5 39.5 -0.774 1 C FALSE 0.0967
10 psu_1 stratum_1 538 10.1 39.8 0.615 0 C FALSE 0.0967
# i 90 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 2
y wt
<int> <dbl>
1 1 1
2 2 1
3 3 1
4 4 1
5 5 1
6 6 1
7 7 1
8 8 1
9 9 1
10 10 1
-- Survey Design ---------------------------------------------------------------
<survey_nonprob> (non-probability, JK1, 4 replicates) [experimental]
Sample size: 10
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
i Skipped 1 survey missing the requested variable: "only".
[ FAIL 10 | WARN 335 | SKIP 426 | PASS 11128 ]
══ Skipped tests (426) ═════════════════════════════════════════════════════════
• A-13 trigger requires careful numerical construction; tracked for follow-up
PR (1): 'test-glm-anova.R:531:3'
• A-20 requires a hand-built fit whose @design@data domain column differs from
the refit's; deferred to follow-up PR (1): 'test-glm-anova.R:481:3'
• On CRAN (422): 'test-analysis-corr-latent-primitives.R:74:1',
'test-analysis-corr-latent-primitives.R:97:1',
'test-analysis-corr-latent-primitives.R:152:1',
'test-analysis-corr-latent-primitives.R:348:1',
'test-analysis-corr-latent-primitives.R:482:1',
'test-analysis-corr-latent-primitives.R:741:1',
'test-analysis-corr-latent-variance.R:14:1',
'test-analysis-corr-latent.R:20:1', 'test-analysis-corr.R:809:1',
'test-analysis-corr.R:817:1', 'test-analysis-corr.R:1231:1',
'test-analysis-corr.R:1646:1', 'test-analysis-corr.R:1664:1',
'test-analysis-covariance.R:690:1', 'test-analysis-covariance.R:699:1',
'test-analysis-covariance.R:712:1', 'test-analysis-covariance.R:734:1',
'test-analysis-covariance.R:747:1', 'test-analysis-covariance.R:768:1',
'test-analysis-covariance.R:785:1', 'test-analysis-covariance.R:798:1',
'test-analysis-covariance.R:819:1', 'test-analysis-covariance.R:851:1',
'test-analysis-covariance.R:884:1', 'test-analysis-covariance.R:924:1',
'test-analysis-covariance.R:1131:1', 'test-analysis-covariance.R:1154:1',
'test-analysis-covariance.R:1176:1', 'test-analysis-diffs-helpers.R:147:1',
'test-analysis-diffs-helpers.R:388:1',
'test-analysis-diffs-marginaleffects.R:6:1',
'test-analysis-diffs-numerical.R:6:1', 'test-analysis-diffs.R:30:1',
'test-analysis-diffs.R:39:1', 'test-analysis-diffs.R:48:1',
'test-analysis-diffs.R:57:1', 'test-analysis-diffs.R:66:1',
'test-analysis-diffs.R:77:1', 'test-analysis-diffs.R:89:1',
'test-analysis-diffs.R:101:1', 'test-analysis-diffs.R:435:1',
'test-analysis-diffs.R:765:1', 'test-analysis-diffs.R:774:1',
'test-analysis-diffs.R:783:1', 'test-analysis-diffs.R:792:1',
'test-analysis-diffs.R:801:1', 'test-analysis-diffs.R:810:1',
'test-analysis-freqs.R:578:1', 'test-analysis-freqs.R:589:1',
'test-analysis-freqs.R:610:1', 'test-analysis-freqs.R:631:1',
'test-analysis-freqs.R:652:1', 'test-analysis-freqs.R:1255:1',
'test-analysis-freqs.R:1499:1', 'test-analysis-helpers.R:59:1',
'test-analysis-helpers.R:77:1', 'test-analysis-helpers.R:110:1',
'test-analysis-helpers.R:398:1', 'test-analysis-helpers.R:754:1',
'test-analysis-helpers.R:1113:1', 'test-analysis-helpers.R:1153:1',
'test-analysis-helpers.R:1462:1', 'test-analysis-means.R:320:1',
'test-analysis-means.R:349:1', 'test-analysis-means.R:812:1',
'test-analysis-quantiles.R:716:1', 'test-analysis-quantiles.R:724:1',
'test-analysis-quantiles.R:759:1', 'test-analysis-quantiles.R:771:1',
'test-analysis-quantiles.R:1095:1', 'test-analysis-ratios.R:578:1',
'test-analysis-ratios.R:588:1', 'test-analysis-ratios.R:598:1',
'test-analysis-ratios.R:608:1', 'test-analysis-ratios.R:1040:1',
'test-analysis-t-test-numerical.R:6:1', 'test-analysis-t-test.R:285:1',
'test-analysis-t-test.R:310:1', 'test-analysis-t-test.R:319:1',
'test-analysis-t-test.R:328:1', 'test-analysis-t-test.R:340:1',
'test-analysis-t-test.R:352:1', 'test-analysis-t-test.R:364:1',
'test-analysis-t-test.R:377:1', 'test-analysis-t-test.R:393:1',
'test-analysis-t-test.R:402:1', 'test-analysis-t-test.R:414:1',
'test-analysis-t-test.R:426:1', 'test-analysis-t-test.R:754:1',
'test-analysis-t-test.R:820:1', 'test-analysis-t-test.R:831:1',
'test-analysis-totals.R:301:1', 'test-analysis-totals.R:320:1',
'test-analysis-totals.R:624:1', 'test-analysis-variance-collection.R:122:1',
'test-analysis-variance-collection.R:146:1',
'test-analysis-variance-collection.R:169:1',
'test-analysis-variance-collection.R:182:1',
'test-analysis-variance-twophase-nonprob.R:9:1',
'test-analysis-variance.R:598:1', 'test-analysis-variance.R:608:1',
'test-analysis-variance.R:622:1', 'test-analysis-variance.R:634:1',
'test-analysis-variance.R:646:1', 'test-analysis-variance.R:657:1',
'test-analysis-variance.R:676:1', 'test-analysis-variance.R:691:1',
'test-analysis-variance.R:705:1', 'test-calibration.R:73:1',
'test-calibration.R:84:1', 'test-calibration.R:96:1',
'test-calibration.R:108:1', 'test-calibration.R:120:1',
'test-calibration.R:132:1', 'test-calibration.R:144:1',
'test-calibration.R:156:1', 'test-calibration.R:170:1',
'test-calibration.R:182:1', 'test-calibration.R:194:1',
'test-calibration.R:207:1', 'test-calibration.R:223:1',
'test-calibration.R:238:1', 'test-calibration.R:264:1',
'test-calibration.R:737:1', 'test-calibration.R:748:1',
'test-calibration.R:762:1', 'test-calibration.R:776:1',
'test-calibration.R:788:1', 'test-calibration.R:802:1',
'test-calibration.R:840:1', 'test-calibration.R:854:1',
'test-calibration.R:866:1', 'test-calibration.R:878:1',
'test-calibration.R:893:1', 'test-calibration.R:906:1',
'test-calibration.R:919:1', 'test-calibration.R:949:1',
'test-calibration.R:974:1', 'test-calibration.R:1002:1',
'test-collection-groups.R:352:1', 'test-collection-groups.R:362:1',
'test-collection-groups.R:375:1', 'test-collection-groups.R:411:1',
'test-collection-groups.R:549:1', 'test-collection-groups.R:556:1',
'test-constructors.R:145:1', 'test-constructors.R:161:1',
'test-constructors.R:171:1', 'test-constructors.R:189:1',
'test-constructors.R:199:1', 'test-constructors.R:259:1',
'test-constructors.R:272:1', 'test-constructors.R:302:1',
'test-constructors.R:329:1', 'test-constructors.R:347:1',
'test-constructors.R:361:1', 'test-constructors.R:730:1',
'test-constructors.R:752:1', 'test-constructors.R:827:1',
'test-constructors.R:850:1', 'test-constructors.R:1145:1',
'test-constructors.R:1159:1', 'test-constructors.R:1200:1',
'test-constructors.R:1211:1', 'test-constructors.R:1227:1',
'test-constructors.R:1243:1', 'test-constructors.R:1265:1',
'test-constructors.R:1613:1', 'test-constructors.R:1624:1',
'test-constructors.R:1636:1', 'test-constructors.R:1648:1',
'test-constructors.R:1660:1', 'test-constructors.R:1672:1',
'test-constructors.R:1738:1', 'test-constructors.R:1744:1',
'test-constructors.R:1750:1', 'test-constructors.R:1756:1',
'test-constructors.R:1762:1', 'test-constructors.R:1769:1',
'test-constructors.R:1917:1', 'test-constructors.R:2079:1',
'test-constructors.R:2091:1', 'test-constructors.R:2103:1',
'test-constructors.R:2115:1', 'test-constructors.R:2137:1',
'test-constructors.R:2159:1', 'test-constructors.R:2181:1',
'test-constructors.R:2193:1', 'test-constructors.R:2216:1',
'test-constructors.R:2289:1', 'test-constructors.R:2316:1',
'test-constructors.R:2343:1', 'test-constructors.R:2497:1',
'test-constructors.R:2524:1', 'test-constructors.R:2551:1',
'test-constructors.R:2648:1', 'test-constructors.R:2686:1',
'test-constructors.R:2710:1', 'test-constructors.R:2734:1',
'test-constructors.R:2757:1', 'test-constructors.R:2781:1',
'test-constructors.R:2891:1', 'test-constructors.R:2906:1',
'test-constructors.R:2921:1', 'test-constructors.R:2940:1',
'test-constructors.R:2959:1', 'test-constructors.R:2978:1',
'test-constructors.R:3009:1', 'test-constructors.R:3021:1',
'test-constructors.R:3035:1', 'test-constructors.R:3050:1',
'test-constructors.R:3067:1', 'test-effective-n.R:212:1',
'test-effective-n.R:220:1', 'test-effective-n.R:229:1',
'test-effective-n.R:444:1', 'test-effective-n.R:452:1',
'test-effective-n.R:460:1', 'test-effective-n.R:468:1',
'test-glm-anova-dispatch.R:270:1', 'test-glm-anova-dispatch.R:274:1',
'test-glm-anova-dispatch.R:280:1', 'test-glm-anova-dispatch.R:284:1',
'test-glm-anova-dispatch.R:289:1', 'test-glm-anova-dispatch.R:295:1',
'test-glm-anova-numerical.R:18:1', 'test-glm-anova.R:353:1',
'test-glm-anova.R:361:1', 'test-glm-anova.R:374:1', 'test-glm-anova.R:398:1',
'test-glm-anova.R:412:1', 'test-glm-anova.R:426:1', 'test-glm-anova.R:436:1',
'test-glm-anova.R:694:1', 'test-glm-anova.R:700:1', 'test-glm-anova.R:709:1',
'test-glm-anova.R:811:1', 'test-glm-anova.R:822:1', 'test-glm-anova.R:833:1',
'test-glm-anova.R:859:1', 'test-glm-anova.R:871:1', 'test-glm-anova.R:919:1',
'test-glm-marginaleffects.R:9:1', 'test-glm-methods.R:52:1',
'test-glm-methods.R:109:1', 'test-glm-methods.R:115:1',
'test-glm-methods.R:205:1', 'test-glm-methods.R:289:1',
'test-glm-methods.R:299:1', 'test-glm-methods.R:312:1',
'test-glm-methods.R:325:1', 'test-glm-methods.R:392:1',
'test-glm-methods.R:424:1', 'test-glm-methods.R:449:1',
'test-glm-methods.R:474:1', 'test-glm-methods.R:526:1',
'test-glm-methods.R:548:1', 'test-glm-methods.R:575:1',
'test-glm-methods.R:584:1', 'test-glm-methods.R:611:1',
'test-glm-methods.R:660:1', 'test-glm-methods.R:675:1',
'test-glm-numerical.R:14:1', 'test-glm.R:128:1', 'test-glm.R:177:1',
'test-glm.R:186:1', 'test-glm.R:196:1', 'test-glm.R:206:1',
'test-glm.R:219:1', 'test-glm.R:229:1', 'test-glm.R:239:1',
'test-glm.R:249:1', 'test-glm.R:261:1', 'test-glm.R:273:1',
'test-glm.R:309:1', 'test-glm.R:325:1', 'test-glm.R:1007:1',
'test-glm.R:1015:1', 'test-glm.R:1288:1', 'test-metadata-infer.R:408:1',
'test-metadata-system.R:187:1', 'test-metadata-system.R:709:1',
'test-metadata-system.R:713:1', 'test-metadata-system.R:721:1',
'test-metadata-system.R:726:1', 'test-metadata-system.R:734:1',
'test-metadata-system.R:739:1', 'test-metadata-system.R:744:1',
'test-metadata-system.R:749:1', 'test-metadata-system.R:925:1',
'test-metadata-system.R:930:1', 'test-metadata-system.R:935:1',
'test-metadata-system.R:939:1', 'test-metadata-system.R:944:1',
'test-metadata-system.R:952:1', 'test-metadata-system.R:960:1',
'test-metadata-system.R:965:1', 'test-metadata-system.R:1107:1',
'test-metadata-system.R:1114:1', 'test-metadata-system.R:1119:1',
'test-metadata-system.R:1127:1', 'test-metadata-system.R:1132:1',
'test-metadata-system.R:1140:1', 'test-metadata-system.R:1145:1',
'test-metadata-system.R:1278:1', 'test-metadata-system.R:1282:1',
'test-metadata-system.R:1290:1', 'test-metadata-system.R:1295:1',
'test-metadata-system.R:1303:1', 'test-metadata-system.R:1308:1',
'test-metadata-system.R:1313:1', 'test-metadata-system.R:1439:1',
'test-metadata-system.R:1443:1', 'test-metadata-system.R:1448:1',
'test-metadata-system.R:1456:1', 'test-metadata-system.R:1461:1',
'test-metadata-system.R:1469:1', 'test-metadata-system.R:1474:1',
'test-metadata-system.R:1623:1', 'test-metadata-system.R:1628:1',
'test-metadata-system.R:1635:1', 'test-metadata-system.R:1643:1',
'test-metadata-system.R:1648:1', 'test-metadata-system.R:1660:1',
'test-metadata-system.R:1665:1', 'test-metadata-system.R:1887:1',
'test-metadata-system.R:2040:1', 'test-metadata-system.R:2054:1',
'test-metadata-system.R:2068:1', 'test-metadata-system.R:2082:1',
'test-metadata-system.R:2202:1', 'test-metadata-system.R:2438:1',
'test-metadata-system.R:2442:1', 'test-metadata-system.R:2622:1',
'test-metadata-system.R:2630:1', 'test-metadata-system.R:2648:1',
'test-metadata-system.R:2663:1', 'test-metadata-system.R:2678:1',
'test-metadata-system.R:2858:1', 'test-metadata-system.R:2866:1',
'test-metadata-system.R:2881:1', 'test-metadata-system.R:2896:1',
'test-metadata-system.R:3079:1', 'test-metadata-system.R:3087:1',
'test-metadata-system.R:3095:1', 'test-metadata-system.R:3110:1',
'test-metadata-system.R:3128:1', 'test-metadata-system.R:3146:1',
'test-metadata-system.R:3164:1', 'test-metadata-system.R:3179:1',
'test-metadata-system.R:3356:1', 'test-metadata-system.R:3364:1',
'test-metadata-system.R:3372:1', 'test-metadata-system.R:3390:1',
'test-metadata-system.R:3408:1', 'test-metadata-system.R:3426:1',
'test-metadata-system.R:3441:1', 'test-metadata-system.R:3506:1',
'test-metadata-system.R:3517:1', 'test-methods-print.R:107:1',
'test-methods-print.R:118:1', 'test-methods-print.R:224:1',
'test-methods-print.R:235:1', 'test-methods-print.R:255:1',
'test-methods-print.R:266:1', 'test-methods-print.R:286:1',
'test-methods-print.R:331:1', 'test-methods-print.R:348:1',
'test-methods-print.R:375:1', 'test-methods-print.R:386:1',
'test-methods-print.R:398:1', 'test-methods-print.R:410:1',
'test-methods-print.R:421:1', 'test-methods-print.R:432:1',
'test-methods-print.R:447:1', 'test-methods-print.R:462:1',
'test-methods-print.R:652:1', 'test-methods-print.R:680:1',
'test-methods-print.R:702:1', 'test-methods-print.R:723:1',
'test-methods-print.R:736:1', 'test-methods-print.R:749:1',
'test-methods-print.R:756:1', 'test-methods-print.R:866:1',
'test-methods-print.R:878:1', 'test-methods-print.R:891:1',
'test-methods-print.R:904:1', 'test-methods-print.R:964:1',
'test-methods-print.R:976:1', 'test-methods-print.R:989:1',
'test-methods-print.R:1002:1', 'test-nonprob-bootstrap-variance.R:585:1',
'test-sata-detection.R:178:1', 'test-sata-detection.R:193:1',
'test-sata-detection.R:211:1', 'test-survey-collection-dispatch.R:319:1',
'test-survey-collection-dispatch.R:343:1',
'test-survey-collection-dispatch.R:366:1',
'test-survey-collection-dispatch.R:379:1',
'test-survey-collection-dispatch.R:389:1',
'test-survey-collection-dispatch.R:399:1',
'test-survey-collection-dispatch.R:424:1',
'test-survey-collection-dispatch.R:446:1',
'test-survey-collection-dispatch.R:559:1',
'test-survey-collection-dispatch.R:819:1', 'test-survey-collection.R:187:1',
'test-survey-collection.R:236:1', 'test-survey-collection.R:381:1',
'test-survey-collection.R:455:1', 'test-survey-collection.R:714:1',
'test-survey-collection.R:742:1', 'test-survey-collection.R:1008:1',
'test-survey-collection.R:1014:1', 'test-survey-collection.R:1025:1',
'test-update-design.R:284:1', 'test-utils.R:640:1',
'test-validators.R:354:1', 'test-validators.R:376:1',
'test-validators.R:398:1', 'test-variance-taylor.R:308:1',
'test-variance-twophase.R:5:1', 'test-variance-vendored-saddlepoint.R:9:1'
• Set SURVEYCORE_EXTENDED_TESTS=true to run extended tests (1):
'test-srr-compliance.R:294:3'
• {MASS} is not installed (1): 'test-calibration.R:633:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-analysis-diffs-helpers.R:478:3'): .extract_me_estimates() with groups: result_groups is a data.frame ──
Expected `nrow(result$result_groups)` to equal 4L.
Differences:
`actual`: 3
`expected`: 4
── Failure ('test-analysis-diffs-helpers.R:668:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ──
Expected `nrow(out$groups_df)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Failure ('test-analysis-diffs-helpers.R:669:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ──
Expected `length(out$col_vecs[["treats"]])` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Error ('test-analysis-diffs-helpers.R:858:3'): .build_diffs_output() p-value adjustment with groups: adjusts within each group ──
Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:858:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs-helpers.R:1038:3'): .build_diffs_output() pct_change with show_means = FALSE + grouped ME + show_pct_change = TRUE: pct_change computed (not NA) ──
Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1038:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs-helpers.R:1334:3'): .build_diffs_output() grouped path with pct_change: group combo loop hits has_group branch ──
Error in `if (grp_ok) { ref_mean_val <- all_rows[[ri]]$mean break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1334:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Failure ('test-analysis-diffs.R:471:3'): get_diffs() with group produces grouped output ──
Expected `nrow(result)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Failure ('test-analysis-diffs.R:490:3'): get_diffs() with covariates and group ──
Expected `nrow(result)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Error ('test-analysis-diffs.R:562:3'): get_diffs() pval_adj with group adjusts within groups ──
Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:562:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore::get_diffs(...)
4. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs.R:1026:3'): get_diffs() pct_change is non-NA with show_means = FALSE (grouped) ──
Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:1026:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore::get_diffs(...)
4. └─surveycore:::.build_diffs_output(...)
[ FAIL 10 | WARN 335 | SKIP 426 | PASS 11128 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-linux-x86_64
Version: 1.0.0
Check: tests
Result: ERROR
Running 'testthat.R' [246s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(surveycore)
>
> test_check("surveycore")
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
# A survey_diffs result
# Design: Taylor series | Family: gaussian (identity)
# DV: y | Treatment: arm (ref: Ctrl)
# Method: coefficient / intercept
# A <survey_diffs> [2 × 4]
# A tibble: 2 x 4
arm estimate mean n
<fct> <dbl> <dbl> <int>
1 Ctrl 0 0.5 100
2 T1 0.05 0.55 100
Saving _problems/test-analysis-diffs-helpers-478.R
Saving _problems/test-analysis-diffs-helpers-668.R
Saving _problems/test-analysis-diffs-helpers-669.R
Saving _problems/test-analysis-diffs-helpers-876.R
Saving _problems/test-analysis-diffs-helpers-1056.R
Saving _problems/test-analysis-diffs-helpers-1352.R
Saving _problems/test-analysis-diffs-471.R
Saving _problems/test-analysis-diffs-490.R
Saving _problems/test-analysis-diffs-569.R
Saving _problems/test-analysis-diffs-1034.R
# A survey_t_test result
# Design: Taylor series | N: 400
# DV: outcome | By: grp2 (A vs. B)
# A <tbl_df> [1 × 13]
# A tibble: 1 x 13
level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat df
<chr> <chr> <dbl> <dbl> <dbl> <int> <int> <dbl> <dbl> <dbl> <dbl>
1 A B 3.51 50.9 54.4 209 191 1.16 5.86 3.18 15
# i 2 more variables: p_value <dbl>, stars <chr>
# A survey_pairwise result
# Design: Taylor series | N: 400
# DV: outcome | By: grp3 (3 levels, 3 pairs)
# Adjustment: holm
# A <tbl_df> [3 × 13]
# A tibble: 3 x 13
level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat
<chr> <chr> <dbl> <dbl> <dbl> <int> <int> <dbl> <dbl> <dbl>
1 X Y -0.910 53.1 52.2 145 136 -3.59 1.77 -0.725
2 X Z -0.847 53.1 52.3 145 119 -3.77 2.08 -0.617
3 Y Z 0.0631 52.2 52.3 136 119 -2.78 2.91 0.0473
# i 3 more variables: df <dbl>, p_value <dbl>, stars <chr>
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
-- Survey Design ---------------------------------------------------------------
<survey_nonprob> (non-probability) [experimental]
* Variance: SRS approximation (no bootstrap replicate weights)
Sample size: 10
# A tibble: 10 x 2
y w
<int> <dbl>
1 1 1
2 2 1
3 3 1
4 4 1
5 5 1
6 6 1
7 7 1
8 8 1
9 9 1
10 10 1
-- Survey Design Summary -------------------------------------------------------
Type: non-probability [experimental]
Sample size: 10
Weighted N: 10
-- Design --
Weights: w
* Range: 1 – 1
* Mean: 1
* CV: 0
Calibration provenance: none stored
Metadata: 0 of 2 variable(s) labeled
Survey-weighted GLM
Family: gaussian (identity link)
Formula: y1 ~ y2 + y3
Design: Taylor series
Coefficients:
(Intercept) y2 y3
51.1868 -0.0624 -2.6042
Degrees of freedom: 16 (design-based)
Survey-weighted GLM
Call:
survey_glm(design = .glm_taylor(), formula = y1 ~ y2 + y3)
Deviance Residuals:
Min 1Q Median 3Q Max
-93.3797 -18.7253 -0.4633 22.9540 75.4878
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 51.1868 0.7268 70.4262 0.0000 ***
y2 -0.0624 0.8308 -0.0752 0.9412
y3 -2.6042 1.4802 -1.7594 0.1003
---
Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
(Dispersion parameter for gaussian family taken to be 986.9)
Null deviance: 197426 on 199 degrees of freedom
Residual deviance: 194412 on 197 degrees of freedom
AIC: 1492
Design df: 16 (taylor)
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
# i 49 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 10
psu strata fpc wt y1 y2 y3 group prob ..surveycore_wt..
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl>
1 psu_1 stratum~ 378 14.3 50.9 -0.122 1 A 0.0701 14.3
2 psu_1 stratum~ 378 21.8 20.1 0.188 0 B 0.0459 21.8
3 psu_1 stratum~ 378 14.4 52.8 0.119 1 B 0.0697 14.4
4 psu_2 stratum~ 378 18.9 46.3 -0.0251 0 A 0.0530 18.9
5 psu_2 stratum~ 378 23.0 51.9 0.108 0 B 0.0435 23.0
6 psu_2 stratum~ 378 11.0 55.8 -0.485 0 C 0.0908 11.0
7 psu_2 stratum~ 378 13.8 64.0 -0.504 0 A 0.0727 13.8
8 psu_2 stratum~ 378 14.2 42.7 -1.66 0 B 0.0706 14.2
9 psu_3 stratum~ 378 16.5 63.0 -0.382 1 C 0.0606 16.5
10 psu_3 stratum~ 378 13.7 53.4 -0.513 1 A 0.0728 13.7
# i 40 more rows
# A tibble: 30 x 9
psu strata fpc wt y1 y2 y3 group ..surveycore_wt..
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <int>
1 psu_1 stratum_1 218 14.3 41.5 1.04 1 B 1
2 psu_1 stratum_1 218 21.8 25.9 0.921 1 B 1
3 psu_2 stratum_1 218 14.4 50.4 0.721 0 B 1
4 psu_2 stratum_1 218 18.9 52.1 -1.04 1 A 1
5 psu_2 stratum_1 218 23.0 46.4 -0.0902 0 A 1
6 psu_3 stratum_1 218 11.0 57.6 0.624 0 C 1
7 psu_3 stratum_1 218 13.7 42.7 -0.954 0 B 1
8 psu_4 stratum_1 218 14.2 36.3 -0.543 0 B 1
9 psu_4 stratum_1 218 16.5 54.3 0.581 0 C 1
10 psu_4 stratum_1 218 13.7 41.9 0.768 0 C 1
# i 20 more rows
# A tibble: 50 x 13
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
# i 49 more rows
# i 2 more variables: repwt_4 <dbl>, repwt_5 <dbl>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
# i 59 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 50 x 13
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8
# i 40 more rows
# i 2 more variables: repwt_4 <dbl>, repwt_5 <dbl>
# A tibble: 50 x 14
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8
# i 40 more rows
# i 3 more variables: repwt_4 <dbl>, repwt_5 <dbl>, fpc_rep <int>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687
3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687
4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687
5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687
6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687
7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687
8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687
9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687
10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687
# i 50 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687
3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687
4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687
5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687
6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687
7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687
8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687
9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687
10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687
# i 50 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 30 x 2
y w
<dbl> <dbl>
1 0.828 2.00
2 0.0757 1.11
3 0.126 1.85
4 2.27 1.22
5 -0.838 1.30
6 -0.469 1.48
7 0.0155 1.20
8 0.961 1.41
9 -0.281 0.965
10 0.0697 1.51
# i 20 more rows
# A tibble: 100 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 538 11.6 50.9 -1.43 0 C FALSE 0.0967
2 psu_1 stratum_1 538 12.0 46.7 -0.718 0 C FALSE 0.0967
3 psu_1 stratum_1 538 12.1 42.0 0.205 1 A TRUE 0.0967
4 psu_1 stratum_1 538 11.6 30.8 -1.90 0 A FALSE 0.0967
5 psu_1 stratum_1 538 9.12 53.7 -0.449 0 A FALSE 0.0967
6 psu_1 stratum_1 538 10.3 56.6 0.523 0 B TRUE 0.0967
7 psu_1 stratum_1 538 9.43 69.5 -0.123 0 C FALSE 0.0967
8 psu_1 stratum_1 538 10.7 55.8 -1.11 1 B TRUE 0.0967
9 psu_1 stratum_1 538 10.5 39.5 -0.774 1 C FALSE 0.0967
10 psu_1 stratum_1 538 10.1 39.8 0.615 0 C FALSE 0.0967
# i 90 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 2
y wt
<int> <dbl>
1 1 1
2 2 1
3 3 1
4 4 1
5 5 1
6 6 1
7 7 1
8 8 1
9 9 1
10 10 1
-- Survey Design ---------------------------------------------------------------
<survey_nonprob> (non-probability, JK1, 4 replicates) [experimental]
Sample size: 10
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
i Skipped 1 survey missing the requested variable: "only".
[ FAIL 10 | WARN 335 | SKIP 426 | PASS 11128 ]
══ Skipped tests (426) ═════════════════════════════════════════════════════════
• A-13 trigger requires careful numerical construction; tracked for follow-up
PR (1): 'test-glm-anova.R:531:3'
• A-20 requires a hand-built fit whose @design@data domain column differs from
the refit's; deferred to follow-up PR (1): 'test-glm-anova.R:481:3'
• On CRAN (422): 'test-analysis-corr-latent-primitives.R:74:1',
'test-analysis-corr-latent-primitives.R:97:1',
'test-analysis-corr-latent-primitives.R:152:1',
'test-analysis-corr-latent-primitives.R:348:1',
'test-analysis-corr-latent-primitives.R:482:1',
'test-analysis-corr-latent-primitives.R:741:1',
'test-analysis-corr-latent-variance.R:14:1',
'test-analysis-corr-latent.R:20:1', 'test-analysis-corr.R:809:1',
'test-analysis-corr.R:817:1', 'test-analysis-corr.R:1231:1',
'test-analysis-corr.R:1646:1', 'test-analysis-corr.R:1664:1',
'test-analysis-covariance.R:690:1', 'test-analysis-covariance.R:699:1',
'test-analysis-covariance.R:712:1', 'test-analysis-covariance.R:734:1',
'test-analysis-covariance.R:747:1', 'test-analysis-covariance.R:768:1',
'test-analysis-covariance.R:785:1', 'test-analysis-covariance.R:798:1',
'test-analysis-covariance.R:819:1', 'test-analysis-covariance.R:851:1',
'test-analysis-covariance.R:884:1', 'test-analysis-covariance.R:924:1',
'test-analysis-covariance.R:1131:1', 'test-analysis-covariance.R:1154:1',
'test-analysis-covariance.R:1176:1', 'test-analysis-diffs-helpers.R:147:1',
'test-analysis-diffs-helpers.R:388:1',
'test-analysis-diffs-marginaleffects.R:6:1',
'test-analysis-diffs-numerical.R:6:1', 'test-analysis-diffs.R:30:1',
'test-analysis-diffs.R:39:1', 'test-analysis-diffs.R:48:1',
'test-analysis-diffs.R:57:1', 'test-analysis-diffs.R:66:1',
'test-analysis-diffs.R:77:1', 'test-analysis-diffs.R:89:1',
'test-analysis-diffs.R:101:1', 'test-analysis-diffs.R:435:1',
'test-analysis-diffs.R:765:1', 'test-analysis-diffs.R:774:1',
'test-analysis-diffs.R:783:1', 'test-analysis-diffs.R:792:1',
'test-analysis-diffs.R:801:1', 'test-analysis-diffs.R:810:1',
'test-analysis-freqs.R:578:1', 'test-analysis-freqs.R:589:1',
'test-analysis-freqs.R:610:1', 'test-analysis-freqs.R:631:1',
'test-analysis-freqs.R:652:1', 'test-analysis-freqs.R:1255:1',
'test-analysis-freqs.R:1499:1', 'test-analysis-helpers.R:59:1',
'test-analysis-helpers.R:77:1', 'test-analysis-helpers.R:110:1',
'test-analysis-helpers.R:398:1', 'test-analysis-helpers.R:754:1',
'test-analysis-helpers.R:1113:1', 'test-analysis-helpers.R:1153:1',
'test-analysis-helpers.R:1462:1', 'test-analysis-means.R:320:1',
'test-analysis-means.R:349:1', 'test-analysis-means.R:812:1',
'test-analysis-quantiles.R:716:1', 'test-analysis-quantiles.R:724:1',
'test-analysis-quantiles.R:759:1', 'test-analysis-quantiles.R:771:1',
'test-analysis-quantiles.R:1095:1', 'test-analysis-ratios.R:578:1',
'test-analysis-ratios.R:588:1', 'test-analysis-ratios.R:598:1',
'test-analysis-ratios.R:608:1', 'test-analysis-ratios.R:1040:1',
'test-analysis-t-test-numerical.R:6:1', 'test-analysis-t-test.R:285:1',
'test-analysis-t-test.R:310:1', 'test-analysis-t-test.R:319:1',
'test-analysis-t-test.R:328:1', 'test-analysis-t-test.R:340:1',
'test-analysis-t-test.R:352:1', 'test-analysis-t-test.R:364:1',
'test-analysis-t-test.R:377:1', 'test-analysis-t-test.R:393:1',
'test-analysis-t-test.R:402:1', 'test-analysis-t-test.R:414:1',
'test-analysis-t-test.R:426:1', 'test-analysis-t-test.R:754:1',
'test-analysis-t-test.R:820:1', 'test-analysis-t-test.R:831:1',
'test-analysis-totals.R:301:1', 'test-analysis-totals.R:320:1',
'test-analysis-totals.R:624:1', 'test-analysis-variance-collection.R:122:1',
'test-analysis-variance-collection.R:146:1',
'test-analysis-variance-collection.R:169:1',
'test-analysis-variance-collection.R:182:1',
'test-analysis-variance-twophase-nonprob.R:9:1',
'test-analysis-variance.R:598:1', 'test-analysis-variance.R:608:1',
'test-analysis-variance.R:622:1', 'test-analysis-variance.R:634:1',
'test-analysis-variance.R:646:1', 'test-analysis-variance.R:657:1',
'test-analysis-variance.R:676:1', 'test-analysis-variance.R:691:1',
'test-analysis-variance.R:705:1', 'test-calibration.R:73:1',
'test-calibration.R:84:1', 'test-calibration.R:96:1',
'test-calibration.R:108:1', 'test-calibration.R:120:1',
'test-calibration.R:132:1', 'test-calibration.R:144:1',
'test-calibration.R:156:1', 'test-calibration.R:170:1',
'test-calibration.R:182:1', 'test-calibration.R:194:1',
'test-calibration.R:207:1', 'test-calibration.R:223:1',
'test-calibration.R:238:1', 'test-calibration.R:264:1',
'test-calibration.R:737:1', 'test-calibration.R:748:1',
'test-calibration.R:762:1', 'test-calibration.R:776:1',
'test-calibration.R:788:1', 'test-calibration.R:802:1',
'test-calibration.R:840:1', 'test-calibration.R:854:1',
'test-calibration.R:866:1', 'test-calibration.R:878:1',
'test-calibration.R:893:1', 'test-calibration.R:906:1',
'test-calibration.R:919:1', 'test-calibration.R:949:1',
'test-calibration.R:974:1', 'test-calibration.R:1002:1',
'test-collection-groups.R:352:1', 'test-collection-groups.R:362:1',
'test-collection-groups.R:375:1', 'test-collection-groups.R:411:1',
'test-collection-groups.R:549:1', 'test-collection-groups.R:556:1',
'test-constructors.R:145:1', 'test-constructors.R:161:1',
'test-constructors.R:171:1', 'test-constructors.R:189:1',
'test-constructors.R:199:1', 'test-constructors.R:259:1',
'test-constructors.R:272:1', 'test-constructors.R:302:1',
'test-constructors.R:329:1', 'test-constructors.R:347:1',
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'test-constructors.R:1613:1', 'test-constructors.R:1624:1',
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'test-constructors.R:2959:1', 'test-constructors.R:2978:1',
'test-constructors.R:3009:1', 'test-constructors.R:3021:1',
'test-constructors.R:3035:1', 'test-constructors.R:3050:1',
'test-constructors.R:3067:1', 'test-effective-n.R:212:1',
'test-effective-n.R:220:1', 'test-effective-n.R:229:1',
'test-effective-n.R:444:1', 'test-effective-n.R:452:1',
'test-effective-n.R:460:1', 'test-effective-n.R:468:1',
'test-glm-anova-dispatch.R:270:1', 'test-glm-anova-dispatch.R:274:1',
'test-glm-anova-dispatch.R:280:1', 'test-glm-anova-dispatch.R:284:1',
'test-glm-anova-dispatch.R:289:1', 'test-glm-anova-dispatch.R:295:1',
'test-glm-anova-numerical.R:18:1', 'test-glm-anova.R:353:1',
'test-glm-anova.R:361:1', 'test-glm-anova.R:374:1', 'test-glm-anova.R:398:1',
'test-glm-anova.R:412:1', 'test-glm-anova.R:426:1', 'test-glm-anova.R:436:1',
'test-glm-anova.R:694:1', 'test-glm-anova.R:700:1', 'test-glm-anova.R:709:1',
'test-glm-anova.R:811:1', 'test-glm-anova.R:822:1', 'test-glm-anova.R:833:1',
'test-glm-anova.R:859:1', 'test-glm-anova.R:871:1', 'test-glm-anova.R:919:1',
'test-glm-marginaleffects.R:9:1', 'test-glm-methods.R:52:1',
'test-glm-methods.R:109:1', 'test-glm-methods.R:115:1',
'test-glm-methods.R:205:1', 'test-glm-methods.R:289:1',
'test-glm-methods.R:299:1', 'test-glm-methods.R:312:1',
'test-glm-methods.R:325:1', 'test-glm-methods.R:392:1',
'test-glm-methods.R:424:1', 'test-glm-methods.R:449:1',
'test-glm-methods.R:474:1', 'test-glm-methods.R:526:1',
'test-glm-methods.R:548:1', 'test-glm-methods.R:575:1',
'test-glm-methods.R:584:1', 'test-glm-methods.R:611:1',
'test-glm-methods.R:660:1', 'test-glm-methods.R:675:1',
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'test-glm.R:309:1', 'test-glm.R:325:1', 'test-glm.R:1007:1',
'test-glm.R:1015:1', 'test-glm.R:1288:1', 'test-metadata-infer.R:408:1',
'test-metadata-system.R:187:1', 'test-metadata-system.R:709:1',
'test-metadata-system.R:713:1', 'test-metadata-system.R:721:1',
'test-metadata-system.R:726:1', 'test-metadata-system.R:734:1',
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'test-metadata-system.R:1290:1', 'test-metadata-system.R:1295:1',
'test-metadata-system.R:1303:1', 'test-metadata-system.R:1308:1',
'test-metadata-system.R:1313:1', 'test-metadata-system.R:1439:1',
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'test-metadata-system.R:2202:1', 'test-metadata-system.R:2438:1',
'test-metadata-system.R:2442:1', 'test-metadata-system.R:2622:1',
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'test-metadata-system.R:2663:1', 'test-metadata-system.R:2678:1',
'test-metadata-system.R:2858:1', 'test-metadata-system.R:2866:1',
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'test-metadata-system.R:3128:1', 'test-metadata-system.R:3146:1',
'test-metadata-system.R:3164:1', 'test-metadata-system.R:3179:1',
'test-metadata-system.R:3356:1', 'test-metadata-system.R:3364:1',
'test-metadata-system.R:3372:1', 'test-metadata-system.R:3390:1',
'test-metadata-system.R:3408:1', 'test-metadata-system.R:3426:1',
'test-metadata-system.R:3441:1', 'test-metadata-system.R:3506:1',
'test-metadata-system.R:3517:1', 'test-methods-print.R:107:1',
'test-methods-print.R:118:1', 'test-methods-print.R:224:1',
'test-methods-print.R:235:1', 'test-methods-print.R:255:1',
'test-methods-print.R:266:1', 'test-methods-print.R:286:1',
'test-methods-print.R:331:1', 'test-methods-print.R:348:1',
'test-methods-print.R:375:1', 'test-methods-print.R:386:1',
'test-methods-print.R:398:1', 'test-methods-print.R:410:1',
'test-methods-print.R:421:1', 'test-methods-print.R:432:1',
'test-methods-print.R:447:1', 'test-methods-print.R:462:1',
'test-methods-print.R:652:1', 'test-methods-print.R:680:1',
'test-methods-print.R:702:1', 'test-methods-print.R:723:1',
'test-methods-print.R:736:1', 'test-methods-print.R:749:1',
'test-methods-print.R:756:1', 'test-methods-print.R:866:1',
'test-methods-print.R:878:1', 'test-methods-print.R:891:1',
'test-methods-print.R:904:1', 'test-methods-print.R:964:1',
'test-methods-print.R:976:1', 'test-methods-print.R:989:1',
'test-methods-print.R:1002:1', 'test-nonprob-bootstrap-variance.R:585:1',
'test-sata-detection.R:178:1', 'test-sata-detection.R:193:1',
'test-sata-detection.R:211:1', 'test-survey-collection-dispatch.R:319:1',
'test-survey-collection-dispatch.R:343:1',
'test-survey-collection-dispatch.R:366:1',
'test-survey-collection-dispatch.R:379:1',
'test-survey-collection-dispatch.R:389:1',
'test-survey-collection-dispatch.R:399:1',
'test-survey-collection-dispatch.R:424:1',
'test-survey-collection-dispatch.R:446:1',
'test-survey-collection-dispatch.R:559:1',
'test-survey-collection-dispatch.R:819:1', 'test-survey-collection.R:187:1',
'test-survey-collection.R:236:1', 'test-survey-collection.R:381:1',
'test-survey-collection.R:455:1', 'test-survey-collection.R:714:1',
'test-survey-collection.R:742:1', 'test-survey-collection.R:1008:1',
'test-survey-collection.R:1014:1', 'test-survey-collection.R:1025:1',
'test-update-design.R:284:1', 'test-utils.R:640:1',
'test-validators.R:354:1', 'test-validators.R:376:1',
'test-validators.R:398:1', 'test-variance-taylor.R:308:1',
'test-variance-twophase.R:5:1', 'test-variance-vendored-saddlepoint.R:9:1'
• Set SURVEYCORE_EXTENDED_TESTS=true to run extended tests (1):
'test-srr-compliance.R:294:3'
• {MASS} is not installed (1): 'test-calibration.R:633:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-analysis-diffs-helpers.R:478:3'): .extract_me_estimates() with groups: result_groups is a data.frame ──
Expected `nrow(result$result_groups)` to equal 4L.
Differences:
`actual`: 3
`expected`: 4
── Failure ('test-analysis-diffs-helpers.R:668:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ──
Expected `nrow(out$groups_df)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Failure ('test-analysis-diffs-helpers.R:669:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ──
Expected `length(out$col_vecs[["treats"]])` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Error ('test-analysis-diffs-helpers.R:858:3'): .build_diffs_output() p-value adjustment with groups: adjusts within each group ──
Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:858:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs-helpers.R:1038:3'): .build_diffs_output() pct_change with show_means = FALSE + grouped ME + show_pct_change = TRUE: pct_change computed (not NA) ──
Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1038:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs-helpers.R:1334:3'): .build_diffs_output() grouped path with pct_change: group combo loop hits has_group branch ──
Error in `if (grp_ok) { ref_mean_val <- all_rows[[ri]]$mean break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1334:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Failure ('test-analysis-diffs.R:471:3'): get_diffs() with group produces grouped output ──
Expected `nrow(result)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Failure ('test-analysis-diffs.R:490:3'): get_diffs() with covariates and group ──
Expected `nrow(result)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Error ('test-analysis-diffs.R:562:3'): get_diffs() pval_adj with group adjusts within groups ──
Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:562:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore::get_diffs(...)
4. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs.R:1026:3'): get_diffs() pct_change is non-NA with show_means = FALSE (grouped) ──
Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:1026:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore::get_diffs(...)
4. └─surveycore:::.build_diffs_output(...)
[ FAIL 10 | WARN 335 | SKIP 426 | PASS 11128 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-windows-x86_64
Version: 1.0.0
Check: tests
Result: ERROR
Running 'testthat.R' [335s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(surveycore)
>
> test_check("surveycore")
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
# A survey_diffs result
# Design: Taylor series | Family: gaussian (identity)
# DV: y | Treatment: arm (ref: Ctrl)
# Method: coefficient / intercept
# A <survey_diffs> [2 × 4]
# A tibble: 2 x 4
arm estimate mean n
<fct> <dbl> <dbl> <int>
1 Ctrl 0 0.5 100
2 T1 0.05 0.55 100
Saving _problems/test-analysis-diffs-helpers-478.R
Saving _problems/test-analysis-diffs-helpers-668.R
Saving _problems/test-analysis-diffs-helpers-669.R
Saving _problems/test-analysis-diffs-helpers-876.R
Saving _problems/test-analysis-diffs-helpers-1056.R
Saving _problems/test-analysis-diffs-helpers-1352.R
Saving _problems/test-analysis-diffs-471.R
Saving _problems/test-analysis-diffs-490.R
Saving _problems/test-analysis-diffs-569.R
Saving _problems/test-analysis-diffs-1034.R
# A survey_t_test result
# Design: Taylor series | N: 400
# DV: outcome | By: grp2 (A vs. B)
# A <tbl_df> [1 × 13]
# A tibble: 1 x 13
level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat df
<chr> <chr> <dbl> <dbl> <dbl> <int> <int> <dbl> <dbl> <dbl> <dbl>
1 A B 3.51 50.9 54.4 209 191 1.16 5.86 3.18 15
# i 2 more variables: p_value <dbl>, stars <chr>
# A survey_pairwise result
# Design: Taylor series | N: 400
# DV: outcome | By: grp3 (3 levels, 3 pairs)
# Adjustment: holm
# A <tbl_df> [3 × 13]
# A tibble: 3 x 13
level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat
<chr> <chr> <dbl> <dbl> <dbl> <int> <int> <dbl> <dbl> <dbl>
1 X Y -0.910 53.1 52.2 145 136 -3.59 1.77 -0.725
2 X Z -0.847 53.1 52.3 145 119 -3.77 2.08 -0.617
3 Y Z 0.0631 52.2 52.3 136 119 -2.78 2.91 0.0473
# i 3 more variables: df <dbl>, p_value <dbl>, stars <chr>
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
-- Survey Design ---------------------------------------------------------------
<survey_nonprob> (non-probability) [experimental]
* Variance: SRS approximation (no bootstrap replicate weights)
Sample size: 10
# A tibble: 10 x 2
y w
<int> <dbl>
1 1 1
2 2 1
3 3 1
4 4 1
5 5 1
6 6 1
7 7 1
8 8 1
9 9 1
10 10 1
-- Survey Design Summary -------------------------------------------------------
Type: non-probability [experimental]
Sample size: 10
Weighted N: 10
-- Design --
Weights: w
* Range: 1 – 1
* Mean: 1
* CV: 0
Calibration provenance: none stored
Metadata: 0 of 2 variable(s) labeled
Survey-weighted GLM
Family: gaussian (identity link)
Formula: y1 ~ y2 + y3
Design: Taylor series
Coefficients:
(Intercept) y2 y3
51.1868 -0.0624 -2.6042
Degrees of freedom: 16 (design-based)
Survey-weighted GLM
Call:
survey_glm(design = .glm_taylor(), formula = y1 ~ y2 + y3)
Deviance Residuals:
Min 1Q Median 3Q Max
-93.3797 -18.7253 -0.4633 22.9540 75.4878
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 51.1868 0.7268 70.4262 0.0000 ***
y2 -0.0624 0.8308 -0.0752 0.9412
y3 -2.6042 1.4802 -1.7594 0.1003
---
Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
(Dispersion parameter for gaussian family taken to be 986.9)
Null deviance: 197426 on 199 degrees of freedom
Residual deviance: 194412 on 197 degrees of freedom
AIC: 1492
Design df: 16 (taylor)
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
# i 49 more rows
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 50 x 10
psu strata fpc wt y1 y2 y3 group prob ..surveycore_wt..
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl>
1 psu_1 stratum~ 378 14.3 50.9 -0.122 1 A 0.0701 14.3
2 psu_1 stratum~ 378 21.8 20.1 0.188 0 B 0.0459 21.8
3 psu_1 stratum~ 378 14.4 52.8 0.119 1 B 0.0697 14.4
4 psu_2 stratum~ 378 18.9 46.3 -0.0251 0 A 0.0530 18.9
5 psu_2 stratum~ 378 23.0 51.9 0.108 0 B 0.0435 23.0
6 psu_2 stratum~ 378 11.0 55.8 -0.485 0 C 0.0908 11.0
7 psu_2 stratum~ 378 13.8 64.0 -0.504 0 A 0.0727 13.8
8 psu_2 stratum~ 378 14.2 42.7 -1.66 0 B 0.0706 14.2
9 psu_3 stratum~ 378 16.5 63.0 -0.382 1 C 0.0606 16.5
10 psu_3 stratum~ 378 13.7 53.4 -0.513 1 A 0.0728 13.7
# i 40 more rows
# A tibble: 30 x 9
psu strata fpc wt y1 y2 y3 group ..surveycore_wt..
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <int>
1 psu_1 stratum_1 218 14.3 41.5 1.04 1 B 1
2 psu_1 stratum_1 218 21.8 25.9 0.921 1 B 1
3 psu_2 stratum_1 218 14.4 50.4 0.721 0 B 1
4 psu_2 stratum_1 218 18.9 52.1 -1.04 1 A 1
5 psu_2 stratum_1 218 23.0 46.4 -0.0902 0 A 1
6 psu_3 stratum_1 218 11.0 57.6 0.624 0 C 1
7 psu_3 stratum_1 218 13.7 42.7 -0.954 0 B 1
8 psu_4 stratum_1 218 14.2 36.3 -0.543 0 B 1
9 psu_4 stratum_1 218 16.5 54.3 0.581 0 C 1
10 psu_4 stratum_1 218 13.7 41.9 0.768 0 C 1
# i 20 more rows
# A tibble: 50 x 13
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
# i 49 more rows
# i 2 more variables: repwt_4 <dbl>, repwt_5 <dbl>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
# i 59 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 50 x 13
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8
# i 40 more rows
# i 2 more variables: repwt_4 <dbl>, repwt_5 <dbl>
# A tibble: 50 x 14
psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <dbl> <dbl> <dbl>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8
# i 40 more rows
# i 3 more variables: repwt_4 <dbl>, repwt_5 <dbl>, fpc_rep <int>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687
3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687
4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687
5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687
6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687
7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687
8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687
9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687
10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687
# i 50 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 60 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687
2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687
3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687
4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687
5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687
6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687
7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687
8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687
9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687
10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687
# i 50 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 30 x 2
y w
<dbl> <dbl>
1 0.828 2.00
2 0.0757 1.11
3 0.126 1.85
4 2.27 1.22
5 -0.838 1.30
6 -0.469 1.48
7 0.0155 1.20
8 0.961 1.41
9 -0.281 0.965
10 0.0697 1.51
# i 20 more rows
# A tibble: 100 x 11
psu strata fpc wt y1 y2 y3 group subset phase1_prob
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr> <lgl> <dbl>
1 psu_1 stratum_1 538 11.6 50.9 -1.43 0 C FALSE 0.0967
2 psu_1 stratum_1 538 12.0 46.7 -0.718 0 C FALSE 0.0967
3 psu_1 stratum_1 538 12.1 42.0 0.205 1 A TRUE 0.0967
4 psu_1 stratum_1 538 11.6 30.8 -1.90 0 A FALSE 0.0967
5 psu_1 stratum_1 538 9.12 53.7 -0.449 0 A FALSE 0.0967
6 psu_1 stratum_1 538 10.3 56.6 0.523 0 B TRUE 0.0967
7 psu_1 stratum_1 538 9.43 69.5 -0.123 0 C FALSE 0.0967
8 psu_1 stratum_1 538 10.7 55.8 -1.11 1 B TRUE 0.0967
9 psu_1 stratum_1 538 10.5 39.5 -0.774 1 C FALSE 0.0967
10 psu_1 stratum_1 538 10.1 39.8 0.615 0 C FALSE 0.0967
# i 90 more rows
# i 1 more variable: phase2_prob <dbl>
# A tibble: 50 x 8
psu strata fpc wt y1 y2 y3 group
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <int> <chr>
1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A
2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B
3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B
4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A
5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B
6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C
7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A
8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B
9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C
10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A
# i 40 more rows
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
# A tibble: 10 x 2
y wt
<int> <dbl>
1 1 1
2 2 1
3 3 1
4 4 1
5 5 1
6 6 1
7 7 1
8 8 1
9 9 1
10 10 1
-- Survey Design ---------------------------------------------------------------
<survey_nonprob> (non-probability, JK1, 4 replicates) [experimental]
Sample size: 10
# A tibble: 10 x 6
y wt r1 r2 r3 r4
<int> <dbl> <dbl> <dbl> <dbl> <dbl>
1 1 1 1 1 1 1
2 2 1 1 1 1 1
3 3 1 1 1 1 1
4 4 1 1 1 1 1
5 5 1 1 1 1 1
6 6 1 1 1 1 1
7 7 1 1 1 1 1
8 8 1 1 1 1 1
9 9 1 1 1 1 1
10 10 1 1 1 1 1
i Skipped 2 surveys missing the requested variable: "w1" and "w2".
i Skipped 1 survey missing the requested variable: "only".
[ FAIL 10 | WARN 335 | SKIP 426 | PASS 11128 ]
══ Skipped tests (426) ═════════════════════════════════════════════════════════
• A-13 trigger requires careful numerical construction; tracked for follow-up
PR (1): 'test-glm-anova.R:531:3'
• A-20 requires a hand-built fit whose @design@data domain column differs from
the refit's; deferred to follow-up PR (1): 'test-glm-anova.R:481:3'
• On CRAN (422): 'test-analysis-corr-latent-primitives.R:74:1',
'test-analysis-corr-latent-primitives.R:97:1',
'test-analysis-corr-latent-primitives.R:152:1',
'test-analysis-corr-latent-primitives.R:348:1',
'test-analysis-corr-latent-primitives.R:482:1',
'test-analysis-corr-latent-primitives.R:741:1',
'test-analysis-corr-latent-variance.R:14:1',
'test-analysis-corr-latent.R:20:1', 'test-analysis-corr.R:809:1',
'test-analysis-corr.R:817:1', 'test-analysis-corr.R:1231:1',
'test-analysis-corr.R:1646:1', 'test-analysis-corr.R:1664:1',
'test-analysis-covariance.R:690:1', 'test-analysis-covariance.R:699:1',
'test-analysis-covariance.R:712:1', 'test-analysis-covariance.R:734:1',
'test-analysis-covariance.R:747:1', 'test-analysis-covariance.R:768:1',
'test-analysis-covariance.R:785:1', 'test-analysis-covariance.R:798:1',
'test-analysis-covariance.R:819:1', 'test-analysis-covariance.R:851:1',
'test-analysis-covariance.R:884:1', 'test-analysis-covariance.R:924:1',
'test-analysis-covariance.R:1131:1', 'test-analysis-covariance.R:1154:1',
'test-analysis-covariance.R:1176:1', 'test-analysis-diffs-helpers.R:147:1',
'test-analysis-diffs-helpers.R:388:1',
'test-analysis-diffs-marginaleffects.R:6:1',
'test-analysis-diffs-numerical.R:6:1', 'test-analysis-diffs.R:30:1',
'test-analysis-diffs.R:39:1', 'test-analysis-diffs.R:48:1',
'test-analysis-diffs.R:57:1', 'test-analysis-diffs.R:66:1',
'test-analysis-diffs.R:77:1', 'test-analysis-diffs.R:89:1',
'test-analysis-diffs.R:101:1', 'test-analysis-diffs.R:435:1',
'test-analysis-diffs.R:765:1', 'test-analysis-diffs.R:774:1',
'test-analysis-diffs.R:783:1', 'test-analysis-diffs.R:792:1',
'test-analysis-diffs.R:801:1', 'test-analysis-diffs.R:810:1',
'test-analysis-freqs.R:578:1', 'test-analysis-freqs.R:589:1',
'test-analysis-freqs.R:610:1', 'test-analysis-freqs.R:631:1',
'test-analysis-freqs.R:652:1', 'test-analysis-freqs.R:1255:1',
'test-analysis-freqs.R:1499:1', 'test-analysis-helpers.R:59:1',
'test-analysis-helpers.R:77:1', 'test-analysis-helpers.R:110:1',
'test-analysis-helpers.R:398:1', 'test-analysis-helpers.R:754:1',
'test-analysis-helpers.R:1113:1', 'test-analysis-helpers.R:1153:1',
'test-analysis-helpers.R:1462:1', 'test-analysis-means.R:320:1',
'test-analysis-means.R:349:1', 'test-analysis-means.R:812:1',
'test-analysis-quantiles.R:716:1', 'test-analysis-quantiles.R:724:1',
'test-analysis-quantiles.R:759:1', 'test-analysis-quantiles.R:771:1',
'test-analysis-quantiles.R:1095:1', 'test-analysis-ratios.R:578:1',
'test-analysis-ratios.R:588:1', 'test-analysis-ratios.R:598:1',
'test-analysis-ratios.R:608:1', 'test-analysis-ratios.R:1040:1',
'test-analysis-t-test-numerical.R:6:1', 'test-analysis-t-test.R:285:1',
'test-analysis-t-test.R:310:1', 'test-analysis-t-test.R:319:1',
'test-analysis-t-test.R:328:1', 'test-analysis-t-test.R:340:1',
'test-analysis-t-test.R:352:1', 'test-analysis-t-test.R:364:1',
'test-analysis-t-test.R:377:1', 'test-analysis-t-test.R:393:1',
'test-analysis-t-test.R:402:1', 'test-analysis-t-test.R:414:1',
'test-analysis-t-test.R:426:1', 'test-analysis-t-test.R:754:1',
'test-analysis-t-test.R:820:1', 'test-analysis-t-test.R:831:1',
'test-analysis-totals.R:301:1', 'test-analysis-totals.R:320:1',
'test-analysis-totals.R:624:1', 'test-analysis-variance-collection.R:122:1',
'test-analysis-variance-collection.R:146:1',
'test-analysis-variance-collection.R:169:1',
'test-analysis-variance-collection.R:182:1',
'test-analysis-variance-twophase-nonprob.R:9:1',
'test-analysis-variance.R:598:1', 'test-analysis-variance.R:608:1',
'test-analysis-variance.R:622:1', 'test-analysis-variance.R:634:1',
'test-analysis-variance.R:646:1', 'test-analysis-variance.R:657:1',
'test-analysis-variance.R:676:1', 'test-analysis-variance.R:691:1',
'test-analysis-variance.R:705:1', 'test-calibration.R:73:1',
'test-calibration.R:84:1', 'test-calibration.R:96:1',
'test-calibration.R:108:1', 'test-calibration.R:120:1',
'test-calibration.R:132:1', 'test-calibration.R:144:1',
'test-calibration.R:156:1', 'test-calibration.R:170:1',
'test-calibration.R:182:1', 'test-calibration.R:194:1',
'test-calibration.R:207:1', 'test-calibration.R:223:1',
'test-calibration.R:238:1', 'test-calibration.R:264:1',
'test-calibration.R:737:1', 'test-calibration.R:748:1',
'test-calibration.R:762:1', 'test-calibration.R:776:1',
'test-calibration.R:788:1', 'test-calibration.R:802:1',
'test-calibration.R:840:1', 'test-calibration.R:854:1',
'test-calibration.R:866:1', 'test-calibration.R:878:1',
'test-calibration.R:893:1', 'test-calibration.R:906:1',
'test-calibration.R:919:1', 'test-calibration.R:949:1',
'test-calibration.R:974:1', 'test-calibration.R:1002:1',
'test-collection-groups.R:352:1', 'test-collection-groups.R:362:1',
'test-collection-groups.R:375:1', 'test-collection-groups.R:411:1',
'test-collection-groups.R:549:1', 'test-collection-groups.R:556:1',
'test-constructors.R:145:1', 'test-constructors.R:161:1',
'test-constructors.R:171:1', 'test-constructors.R:189:1',
'test-constructors.R:199:1', 'test-constructors.R:259:1',
'test-constructors.R:272:1', 'test-constructors.R:302:1',
'test-constructors.R:329:1', 'test-constructors.R:347:1',
'test-constructors.R:361:1', 'test-constructors.R:730:1',
'test-constructors.R:752:1', 'test-constructors.R:827:1',
'test-constructors.R:850:1', 'test-constructors.R:1145:1',
'test-constructors.R:1159:1', 'test-constructors.R:1200:1',
'test-constructors.R:1211:1', 'test-constructors.R:1227:1',
'test-constructors.R:1243:1', 'test-constructors.R:1265:1',
'test-constructors.R:1613:1', 'test-constructors.R:1624:1',
'test-constructors.R:1636:1', 'test-constructors.R:1648:1',
'test-constructors.R:1660:1', 'test-constructors.R:1672:1',
'test-constructors.R:1738:1', 'test-constructors.R:1744:1',
'test-constructors.R:1750:1', 'test-constructors.R:1756:1',
'test-constructors.R:1762:1', 'test-constructors.R:1769:1',
'test-constructors.R:1917:1', 'test-constructors.R:2079:1',
'test-constructors.R:2091:1', 'test-constructors.R:2103:1',
'test-constructors.R:2115:1', 'test-constructors.R:2137:1',
'test-constructors.R:2159:1', 'test-constructors.R:2181:1',
'test-constructors.R:2193:1', 'test-constructors.R:2216:1',
'test-constructors.R:2289:1', 'test-constructors.R:2316:1',
'test-constructors.R:2343:1', 'test-constructors.R:2497:1',
'test-constructors.R:2524:1', 'test-constructors.R:2551:1',
'test-constructors.R:2648:1', 'test-constructors.R:2686:1',
'test-constructors.R:2710:1', 'test-constructors.R:2734:1',
'test-constructors.R:2757:1', 'test-constructors.R:2781:1',
'test-constructors.R:2891:1', 'test-constructors.R:2906:1',
'test-constructors.R:2921:1', 'test-constructors.R:2940:1',
'test-constructors.R:2959:1', 'test-constructors.R:2978:1',
'test-constructors.R:3009:1', 'test-constructors.R:3021:1',
'test-constructors.R:3035:1', 'test-constructors.R:3050:1',
'test-constructors.R:3067:1', 'test-effective-n.R:212:1',
'test-effective-n.R:220:1', 'test-effective-n.R:229:1',
'test-effective-n.R:444:1', 'test-effective-n.R:452:1',
'test-effective-n.R:460:1', 'test-effective-n.R:468:1',
'test-glm-anova-dispatch.R:270:1', 'test-glm-anova-dispatch.R:274:1',
'test-glm-anova-dispatch.R:280:1', 'test-glm-anova-dispatch.R:284:1',
'test-glm-anova-dispatch.R:289:1', 'test-glm-anova-dispatch.R:295:1',
'test-glm-anova-numerical.R:18:1', 'test-glm-anova.R:353:1',
'test-glm-anova.R:361:1', 'test-glm-anova.R:374:1', 'test-glm-anova.R:398:1',
'test-glm-anova.R:412:1', 'test-glm-anova.R:426:1', 'test-glm-anova.R:436:1',
'test-glm-anova.R:694:1', 'test-glm-anova.R:700:1', 'test-glm-anova.R:709:1',
'test-glm-anova.R:811:1', 'test-glm-anova.R:822:1', 'test-glm-anova.R:833:1',
'test-glm-anova.R:859:1', 'test-glm-anova.R:871:1', 'test-glm-anova.R:919:1',
'test-glm-marginaleffects.R:9:1', 'test-glm-methods.R:52:1',
'test-glm-methods.R:109:1', 'test-glm-methods.R:115:1',
'test-glm-methods.R:205:1', 'test-glm-methods.R:289:1',
'test-glm-methods.R:299:1', 'test-glm-methods.R:312:1',
'test-glm-methods.R:325:1', 'test-glm-methods.R:392:1',
'test-glm-methods.R:424:1', 'test-glm-methods.R:449:1',
'test-glm-methods.R:474:1', 'test-glm-methods.R:526:1',
'test-glm-methods.R:548:1', 'test-glm-methods.R:575:1',
'test-glm-methods.R:584:1', 'test-glm-methods.R:611:1',
'test-glm-methods.R:660:1', 'test-glm-methods.R:675:1',
'test-glm-numerical.R:14:1', 'test-glm.R:128:1', 'test-glm.R:177:1',
'test-glm.R:186:1', 'test-glm.R:196:1', 'test-glm.R:206:1',
'test-glm.R:219:1', 'test-glm.R:229:1', 'test-glm.R:239:1',
'test-glm.R:249:1', 'test-glm.R:261:1', 'test-glm.R:273:1',
'test-glm.R:309:1', 'test-glm.R:325:1', 'test-glm.R:1007:1',
'test-glm.R:1015:1', 'test-glm.R:1288:1', 'test-metadata-infer.R:408:1',
'test-metadata-system.R:187:1', 'test-metadata-system.R:709:1',
'test-metadata-system.R:713:1', 'test-metadata-system.R:721:1',
'test-metadata-system.R:726:1', 'test-metadata-system.R:734:1',
'test-metadata-system.R:739:1', 'test-metadata-system.R:744:1',
'test-metadata-system.R:749:1', 'test-metadata-system.R:925:1',
'test-metadata-system.R:930:1', 'test-metadata-system.R:935:1',
'test-metadata-system.R:939:1', 'test-metadata-system.R:944:1',
'test-metadata-system.R:952:1', 'test-metadata-system.R:960:1',
'test-metadata-system.R:965:1', 'test-metadata-system.R:1107:1',
'test-metadata-system.R:1114:1', 'test-metadata-system.R:1119:1',
'test-metadata-system.R:1127:1', 'test-metadata-system.R:1132:1',
'test-metadata-system.R:1140:1', 'test-metadata-system.R:1145:1',
'test-metadata-system.R:1278:1', 'test-metadata-system.R:1282:1',
'test-metadata-system.R:1290:1', 'test-metadata-system.R:1295:1',
'test-metadata-system.R:1303:1', 'test-metadata-system.R:1308:1',
'test-metadata-system.R:1313:1', 'test-metadata-system.R:1439:1',
'test-metadata-system.R:1443:1', 'test-metadata-system.R:1448:1',
'test-metadata-system.R:1456:1', 'test-metadata-system.R:1461:1',
'test-metadata-system.R:1469:1', 'test-metadata-system.R:1474:1',
'test-metadata-system.R:1623:1', 'test-metadata-system.R:1628:1',
'test-metadata-system.R:1635:1', 'test-metadata-system.R:1643:1',
'test-metadata-system.R:1648:1', 'test-metadata-system.R:1660:1',
'test-metadata-system.R:1665:1', 'test-metadata-system.R:1887:1',
'test-metadata-system.R:2040:1', 'test-metadata-system.R:2054:1',
'test-metadata-system.R:2068:1', 'test-metadata-system.R:2082:1',
'test-metadata-system.R:2202:1', 'test-metadata-system.R:2438:1',
'test-metadata-system.R:2442:1', 'test-metadata-system.R:2622:1',
'test-metadata-system.R:2630:1', 'test-metadata-system.R:2648:1',
'test-metadata-system.R:2663:1', 'test-metadata-system.R:2678:1',
'test-metadata-system.R:2858:1', 'test-metadata-system.R:2866:1',
'test-metadata-system.R:2881:1', 'test-metadata-system.R:2896:1',
'test-metadata-system.R:3079:1', 'test-metadata-system.R:3087:1',
'test-metadata-system.R:3095:1', 'test-metadata-system.R:3110:1',
'test-metadata-system.R:3128:1', 'test-metadata-system.R:3146:1',
'test-metadata-system.R:3164:1', 'test-metadata-system.R:3179:1',
'test-metadata-system.R:3356:1', 'test-metadata-system.R:3364:1',
'test-metadata-system.R:3372:1', 'test-metadata-system.R:3390:1',
'test-metadata-system.R:3408:1', 'test-metadata-system.R:3426:1',
'test-metadata-system.R:3441:1', 'test-metadata-system.R:3506:1',
'test-metadata-system.R:3517:1', 'test-methods-print.R:107:1',
'test-methods-print.R:118:1', 'test-methods-print.R:224:1',
'test-methods-print.R:235:1', 'test-methods-print.R:255:1',
'test-methods-print.R:266:1', 'test-methods-print.R:286:1',
'test-methods-print.R:331:1', 'test-methods-print.R:348:1',
'test-methods-print.R:375:1', 'test-methods-print.R:386:1',
'test-methods-print.R:398:1', 'test-methods-print.R:410:1',
'test-methods-print.R:421:1', 'test-methods-print.R:432:1',
'test-methods-print.R:447:1', 'test-methods-print.R:462:1',
'test-methods-print.R:652:1', 'test-methods-print.R:680:1',
'test-methods-print.R:702:1', 'test-methods-print.R:723:1',
'test-methods-print.R:736:1', 'test-methods-print.R:749:1',
'test-methods-print.R:756:1', 'test-methods-print.R:866:1',
'test-methods-print.R:878:1', 'test-methods-print.R:891:1',
'test-methods-print.R:904:1', 'test-methods-print.R:964:1',
'test-methods-print.R:976:1', 'test-methods-print.R:989:1',
'test-methods-print.R:1002:1', 'test-nonprob-bootstrap-variance.R:585:1',
'test-sata-detection.R:178:1', 'test-sata-detection.R:193:1',
'test-sata-detection.R:211:1', 'test-survey-collection-dispatch.R:319:1',
'test-survey-collection-dispatch.R:343:1',
'test-survey-collection-dispatch.R:366:1',
'test-survey-collection-dispatch.R:379:1',
'test-survey-collection-dispatch.R:389:1',
'test-survey-collection-dispatch.R:399:1',
'test-survey-collection-dispatch.R:424:1',
'test-survey-collection-dispatch.R:446:1',
'test-survey-collection-dispatch.R:559:1',
'test-survey-collection-dispatch.R:819:1', 'test-survey-collection.R:187:1',
'test-survey-collection.R:236:1', 'test-survey-collection.R:381:1',
'test-survey-collection.R:455:1', 'test-survey-collection.R:714:1',
'test-survey-collection.R:742:1', 'test-survey-collection.R:1008:1',
'test-survey-collection.R:1014:1', 'test-survey-collection.R:1025:1',
'test-update-design.R:284:1', 'test-utils.R:640:1',
'test-validators.R:354:1', 'test-validators.R:376:1',
'test-validators.R:398:1', 'test-variance-taylor.R:308:1',
'test-variance-twophase.R:5:1', 'test-variance-vendored-saddlepoint.R:9:1'
• Set SURVEYCORE_EXTENDED_TESTS=true to run extended tests (1):
'test-srr-compliance.R:294:3'
• {MASS} is not installed (1): 'test-calibration.R:633:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-analysis-diffs-helpers.R:478:3'): .extract_me_estimates() with groups: result_groups is a data.frame ──
Expected `nrow(result$result_groups)` to equal 4L.
Differences:
`actual`: 3
`expected`: 4
── Failure ('test-analysis-diffs-helpers.R:668:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ──
Expected `nrow(out$groups_df)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Failure ('test-analysis-diffs-helpers.R:669:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ──
Expected `length(out$col_vecs[["treats"]])` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Error ('test-analysis-diffs-helpers.R:858:3'): .build_diffs_output() p-value adjustment with groups: adjusts within each group ──
Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:858:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs-helpers.R:1038:3'): .build_diffs_output() pct_change with show_means = FALSE + grouped ME + show_pct_change = TRUE: pct_change computed (not NA) ──
Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1038:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs-helpers.R:1334:3'): .build_diffs_output() grouped path with pct_change: group combo loop hits has_group branch ──
Error in `if (grp_ok) { ref_mean_val <- all_rows[[ri]]$mean break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1334:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore:::.build_diffs_output(...)
── Failure ('test-analysis-diffs.R:471:3'): get_diffs() with group produces grouped output ──
Expected `nrow(result)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Failure ('test-analysis-diffs.R:490:3'): get_diffs() with covariates and group ──
Expected `nrow(result)` to equal 6L.
Differences:
`actual`: 5
`expected`: 6
── Error ('test-analysis-diffs.R:562:3'): get_diffs() pval_adj with group adjusts within groups ──
Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:562:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore::get_diffs(...)
4. └─surveycore:::.build_diffs_output(...)
── Error ('test-analysis-diffs.R:1026:3'): get_diffs() pct_change is non-NA with show_means = FALSE (grouped) ──
Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:1026:3
2. │ └─base::withCallingHandlers(...)
3. └─surveycore::get_diffs(...)
4. └─surveycore:::.build_diffs_output(...)
[ FAIL 10 | WARN 335 | SKIP 426 | PASS 11128 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-windows-x86_64
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